RNA–Protein interactions for RNA: ENST00000488961.5

BEST3-205, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-205ENST00000488961 HMGXB3Q12766 1538 aa11.17□□□□□ -0.62
BEST3-205ENST00000488961 TDRD9Q8NDG6 1382 aaKnown RBP11.16□□□□□ -0.62
BEST3-205ENST00000488961 ARHGAP35Q9NRY4 1499 aa11.16□□□□□ -0.62
BEST3-205ENST00000488961 CARMIL1Q5VZK9 1371 aa11.16□□□□□ -0.62
BEST3-205ENST00000488961 SIN3AQ96ST3 1273 aa11.14□□□□□ -0.63
BEST3-205ENST00000488961 FHOD3Q2V2M9 1422 aa11.13□□□□□ -0.63
BEST3-205ENST00000488961 FANCD2Q9BXW9 1451 aa11.13□□□□□ -0.63
BEST3-205ENST00000488961 DHX57Q6P158 1386 aaKnown RBP11.09□□□□□ -0.63
BEST3-205ENST00000488961 KCNH8Q96L42 1107 aa11.08□□□□□ -0.64
BEST3-205ENST00000488961 TSHZ2Q9NRE2 1034 aa11.08□□□□□ -0.64
BEST3-205ENST00000488961 CHIC2Q9UKJ5 165 aa11.06□□□□□ -0.64
BEST3-205ENST00000488961 PHLDB1Q86UU1 1377 aa11.06□□□□□ -0.64
BEST3-205ENST00000488961 PLPPR3Q6T4P5 718 aa11.06□□□□□ -0.64
BEST3-205ENST00000488961 CCNB3Q8WWL7 1395 aa11.05□□□□□ -0.64
BEST3-205ENST00000488961 ERICH3Q5RHP9 1530 aa11.05□□□□□ -0.64
BEST3-205ENST00000488961 ANO8Q9HCE9 1232 aaPredicted RBP11.04□□□□□ -0.64
BEST3-205ENST00000488961 POLA1P09884 1462 aaPredicted RBP11.04□□□□□ -0.64
BEST3-205ENST00000488961 RAB3GAP2Q9H2M9 1393 aa11.03□□□□□ -0.64
BEST3-205ENST00000488961 FBLN2P98095 1184 aa11.02□□□□□ -0.65
BEST3-205ENST00000488961 TOPBP1Q92547 1522 aa11.01□□□□□ -0.65
BEST3-205ENST00000488961 CNGB1Q14028 1251 aaPredicted RBP11.01□□□□□ -0.65
BEST3-205ENST00000488961 URB2Q14146 1524 aaKnown RBP10.98□□□□□ -0.65
BEST3-205ENST00000488961 RRP7BPQ9NSQ0 103 aa10.98□□□□□ -0.65
BEST3-205ENST00000488961 DDX10Q13206 875 aaKnown RBP10.98□□□□□ -0.65
BEST3-205ENST00000488961 PCF11O94913 1555 aaKnown RBP10.97□□□□□ -0.65
BEST3-205ENST00000488961 AQRO60306 1485 aaKnown RBP eCLIP10.96□□□□□ -0.65
BEST3-205ENST00000488961 FOXD1Q16676 465 aa10.96□□□□□ -0.65
BEST3-205ENST00000488961 SUPT16HQ9Y5B9 1047 aaKnown RBP10.96□□□□□ -0.65
BEST3-205ENST00000488961 PRDM2Q13029 1718 aa10.95□□□□□ -0.66
BEST3-205ENST00000488961 LRRC9Q6ZRR7 1453 aa10.94□□□□□ -0.66
BEST3-205ENST00000488961 RRBP1Q9P2E9 1410 aaKnown RBP10.94□□□□□ -0.66
BEST3-205ENST00000488961 TIAM1Q13009 1591 aa10.94□□□□□ -0.66
BEST3-205ENST00000488961 KIF21AQ7Z4S6 1674 aa10.93□□□□□ -0.66
BEST3-205ENST00000488961 MTUS2Q5JR59 1369 aa10.92□□□□□ -0.66
BEST3-205ENST00000488961 DNMBPQ6XZF7 1577 aa10.91□□□□□ -0.66
BEST3-205ENST00000488961 SENP3-EIF4A1A0A087X0R7 540 aa10.91□□□□□ -0.66
BEST3-205ENST00000488961 BCANQ96GW7 911 aa10.91□□□□□ -0.66
BEST3-205ENST00000488961 TRIM52Q96A61 297 aa10.91□□□□□ -0.66
BEST3-205ENST00000488961 PDS5BQ9NTI5 1447 aa10.89□□□□□ -0.67
BEST3-205ENST00000488961 GAPVD1Q14C86 1478 aa10.89□□□□□ -0.67
BEST3-205ENST00000488961 SETD5Q9C0A6 1442 aa10.88□□□□□ -0.67
BEST3-205ENST00000488961 ABCA10Q8WWZ4 1543 aa10.87□□□□□ -0.67
BEST3-205ENST00000488961 ZNF777Q9ULD5 760 aaPredicted RBP10.87□□□□□ -0.67
BEST3-205ENST00000488961 MAPKBP1O60336 1514 aa10.86□□□□□ -0.67
BEST3-205ENST00000488961 WDR97A6NE52 1622 aa10.86□□□□□ -0.67
BEST3-205ENST00000488961 ZNF644Q9H582 1327 aaPredicted RBP10.86□□□□□ -0.67
BEST3-205ENST00000488961 PTPRKQ15262 1439 aa10.86□□□□□ -0.67
BEST3-205ENST00000488961 ZNF608Q9ULD9 1512 aaPredicted RBP10.85□□□□□ -0.67
BEST3-205ENST00000488961 CCDC136Q96JN2 1154 aa10.85□□□□□ -0.67
BEST3-205ENST00000488961 FHAD1B1AJZ9 1412 aa10.84□□□□□ -0.67
BEST3-205ENST00000488961 SALL2Q9Y467 1007 aaPredicted RBP10.84□□□□□ -0.67
BEST3-205ENST00000488961 LRRIQ1Q96JM4 1722 aa10.82□□□□□ -0.68
BEST3-205ENST00000488961 CDK13Q14004 1512 aaKnown RBP10.82□□□□□ -0.68
BEST3-205ENST00000488961 POLR3GLQ9BT43 218 aa10.81□□□□□ -0.68
BEST3-205ENST00000488961 ZNF326Q5BKZ1 582 aaKnown RBP10.8□□□□□ -0.68
BEST3-205ENST00000488961 CTTNBP2Q8WZ74 1663 aa10.8□□□□□ -0.68
BEST3-205ENST00000488961 FGD6Q6ZV73 1430 aa10.78□□□□□ -0.68
BEST3-205ENST00000488961 CASKIN1Q8WXD9 1431 aa10.78□□□□□ -0.68
BEST3-205ENST00000488961 MAGI3Q5TCQ9 1506 aa10.78□□□□□ -0.68
BEST3-205ENST00000488961 NCOA2Q15596 1464 aa10.78□□□□□ -0.68
BEST3-205ENST00000488961 LAMC3Q9Y6N6 1575 aa10.77□□□□□ -0.69
BEST3-205ENST00000488961 TONSLQ96HA7 1378 aa10.77□□□□□ -0.69
BEST3-205ENST00000488961 SNAPC4Q5SXM2 1469 aa10.76□□□□□ -0.69
BEST3-205ENST00000488961 CHMP7Q8WUX9 453 aaPredicted RBP10.76□□□□□ -0.69
BEST3-205ENST00000488961 MSH5O43196 834 aa10.76□□□□□ -0.69
BEST3-205ENST00000488961 UBE2Q2Q8WVN8 375 aa10.76□□□□□ -0.69
BEST3-205ENST00000488961 CFAP43Q8NDM7 1665 aa10.76□□□□□ -0.69
BEST3-205ENST00000488961 RTN4Q9NQC3 1192 aaKnown RBP10.75□□□□□ -0.69
BEST3-205ENST00000488961 FMN1Q68DA7 1419 aa10.75□□□□□ -0.69
BEST3-205ENST00000488961 CCDC18Q5T9S5 1454 aa10.75□□□□□ -0.69
BEST3-205ENST00000488961 FYCO1Q9BQS8 1478 aa10.75□□□□□ -0.69
BEST3-205ENST00000488961 RBM19Q9Y4C8 960 aaKnown RBP10.75□□□□□ -0.69
BEST3-205ENST00000488961 PPP1R15AO75807 674 aaPredicted RBP10.75□□□□□ -0.69
BEST3-205ENST00000488961 ERCC6Q03468 1493 aa10.74□□□□□ -0.69
BEST3-205ENST00000488961 CLSPNQ9HAW4 1339 aa10.74□□□□□ -0.69
BEST3-205ENST00000488961 IRX6P78412 446 aaPredicted RBP10.74□□□□□ -0.69
BEST3-205ENST00000488961 ABCA5Q8WWZ7 1642 aa10.73□□□□□ -0.69
BEST3-205ENST00000488961 CUL7Q14999 1698 aa10.73□□□□□ -0.69
BEST3-205ENST00000488961 KDM6BO15054 1643 aa10.72□□□□□ -0.69
BEST3-205ENST00000488961 DEKP35659 375 aaKnown RBP10.71□□□□□ -0.69
BEST3-205ENST00000488961 TARBP1Q13395 1621 aaKnown RBP10.71□□□□□ -0.69
BEST3-205ENST00000488961 THOC2Q8NI27 1593 aaKnown RBP10.71□□□□□ -0.7
BEST3-205ENST00000488961 MYOM3Q5VTT5 1437 aa10.7□□□□□ -0.7
BEST3-205ENST00000488961 EIF5BO60841 1220 aaKnown RBP10.7□□□□□ -0.7
BEST3-205ENST00000488961 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.7□□□□□ -0.7
BEST3-205ENST00000488961 GRIN2BQ13224 1484 aa10.69□□□□□ -0.7
BEST3-205ENST00000488961 PBRM1Q86U86 1689 aa10.69□□□□□ -0.7
BEST3-205ENST00000488961 NAIPQ13075 1403 aa10.69□□□□□ -0.7
BEST3-205ENST00000488961 EFCAB5A4FU69 1503 aa10.69□□□□□ -0.7
BEST3-205ENST00000488961 FKBP8Q14318 412 aa10.68□□□□□ -0.7
BEST3-205ENST00000488961 CCDC184Q52MB2 194 aa10.67□□□□□ -0.7
BEST3-205ENST00000488961 L3MBTL2Q969R5 705 aa10.67□□□□□ -0.7
BEST3-205ENST00000488961 MPHOSPH9Q99550 1183 aa10.67□□□□□ -0.7
BEST3-205ENST00000488961 PRG4Q92954 1404 aaPredicted RBP10.67□□□□□ -0.7
BEST3-205ENST00000488961 HSPA5P11021 654 aaKnown RBP10.67□□□□□ -0.7
BEST3-205ENST00000488961 C11orf95C9JLR9 678 aaPredicted RBP10.66□□□□□ -0.7
BEST3-205ENST00000488961 SLC4A1APQ9BWU0 796 aaKnown RBP10.66□□□□□ -0.7
BEST3-205ENST00000488961 DAXXQ9UER7 740 aaPredicted RBP10.66□□□□□ -0.7
BEST3-205ENST00000488961 EPRSP07814 1512 aaKnown RBP10.66□□□□□ -0.7
BEST3-205ENST00000488961 PTPN23Q9H3S7 1636 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms