RNA–Protein interactions for RNA: ENST00000488743.6

SLC5A6-217, Transcript of solute carrier family 5 member 6, humanhuman

TSL 2

Gene SLC5A6, Length 3,174 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC5A6-217ENST00000488743 NBR1Q14596 966 aa16.85■□□□□ 0.29
SLC5A6-217ENST00000488743 KIF21AQ7Z4S6 1674 aa16.85■□□□□ 0.29
SLC5A6-217ENST00000488743 GOLGA3Q08378 1498 aa16.84■□□□□ 0.29
SLC5A6-217ENST00000488743 PODXL2Q9NZ53 605 aa16.83■□□□□ 0.28
SLC5A6-217ENST00000488743 DAXXQ9UER7 740 aaPredicted RBP16.81■□□□□ 0.28
SLC5A6-217ENST00000488743 URB2Q14146 1524 aaKnown RBP16.81■□□□□ 0.28
SLC5A6-217ENST00000488743 RAD54L2Q9Y4B4 1467 aa16.77■□□□□ 0.28
SLC5A6-217ENST00000488743 FANCIQ9NVI1 1328 aa16.76■□□□□ 0.27
SLC5A6-217ENST00000488743 TDRD9Q8NDG6 1382 aaKnown RBP16.76■□□□□ 0.27
SLC5A6-217ENST00000488743 NEFLP07196 543 aa16.75■□□□□ 0.27
SLC5A6-217ENST00000488743 CUX1P39880 1505 aa16.74■□□□□ 0.27
SLC5A6-217ENST00000488743 MRC2Q9UBG0 1479 aa16.72■□□□□ 0.27
SLC5A6-217ENST00000488743 TOPBP1Q92547 1522 aa16.71■□□□□ 0.27
SLC5A6-217ENST00000488743 SYNJ1O43426 1573 aa16.71■□□□□ 0.27
SLC5A6-217ENST00000488743 FBLN2P98095 1184 aa16.71■□□□□ 0.27
SLC5A6-217ENST00000488743 FGD5Q6ZNL6 1462 aa16.67■□□□□ 0.26
SLC5A6-217ENST00000488743 KIF21BO75037 1637 aa16.67■□□□□ 0.26
SLC5A6-217ENST00000488743 AQRO60306 1485 aaKnown RBP eCLIP16.66■□□□□ 0.262e-6■■■■□ 25.7
SLC5A6-217ENST00000488743 CLIP1P30622 1438 aa16.66■□□□□ 0.26
SLC5A6-217ENST00000488743 RANGAP1P46060 587 aaPredicted RBP16.65■□□□□ 0.26
SLC5A6-217ENST00000488743 POLA1P09884 1462 aaPredicted RBP16.64■□□□□ 0.26
SLC5A6-217ENST00000488743 ZNF608Q9ULD9 1512 aaPredicted RBP16.64■□□□□ 0.25
SLC5A6-217ENST00000488743 HNRNPUL2Q1KMD3 747 aaKnown RBP16.63■□□□□ 0.25
SLC5A6-217ENST00000488743 CUX2O14529 1486 aa16.61■□□□□ 0.25
SLC5A6-217ENST00000488743 KCNH8Q96L42 1107 aa16.61■□□□□ 0.25
SLC5A6-217ENST00000488743 CDK11AQ9UQ88 783 aaPredicted RBP16.61■□□□□ 0.25
SLC5A6-217ENST00000488743 THOC2Q8NI27 1593 aaKnown RBP16.6■□□□□ 0.25
SLC5A6-217ENST00000488743 RTL5Q5HYW3 569 aaPredicted RBP16.6■□□□□ 0.25
SLC5A6-217ENST00000488743 VPS8Q8N3P4 1428 aa16.58■□□□□ 0.25
SLC5A6-217ENST00000488743 TIMELESSQ9UNS1 1208 aa16.57■□□□□ 0.24
SLC5A6-217ENST00000488743 RAPGEF2Q9Y4G8 1499 aa16.56■□□□□ 0.24
SLC5A6-217ENST00000488743 DNMBPQ6XZF7 1577 aa16.56■□□□□ 0.24
SLC5A6-217ENST00000488743 WDR62O43379 1518 aa16.55■□□□□ 0.24
SLC5A6-217ENST00000488743 NOP58Q9Y2X3 529 aaKnown RBP16.52■□□□□ 0.23
SLC5A6-217ENST00000488743 TOP2BQ02880 1626 aa16.51■□□□□ 0.23
SLC5A6-217ENST00000488743 PRDM2Q13029 1718 aa16.51■□□□□ 0.23
SLC5A6-217ENST00000488743 PAK3O75914 559 aaPredicted RBP16.49■□□□□ 0.23
SLC5A6-217ENST00000488743 CHMP7Q8WUX9 453 aaPredicted RBP16.46■□□□□ 0.22
SLC5A6-217ENST00000488743 ZMYND15Q9H091 742 aa16.46■□□□□ 0.22
SLC5A6-217ENST00000488743 VSIG10Q8N0Z9 540 aa16.45■□□□□ 0.22
SLC5A6-217ENST00000488743 IFT140Q96RY7 1462 aa16.43■□□□□ 0.22
SLC5A6-217ENST00000488743 BIVM-ERCC5R4GMW8 1640 aa16.42■□□□□ 0.22
SLC5A6-217ENST00000488743 GLIPR1L2Q4G1C9 344 aa16.42■□□□□ 0.22
SLC5A6-217ENST00000488743 IGF1RP08069 1367 aa16.41■□□□□ 0.22
SLC5A6-217ENST00000488743 IRX6P78412 446 aaPredicted RBP16.41■□□□□ 0.22
SLC5A6-217ENST00000488743 GAPVD1Q14C86 1478 aa16.41■□□□□ 0.22
SLC5A6-217ENST00000488743 TRIM52Q96A61 297 aa16.4■□□□□ 0.22
SLC5A6-217ENST00000488743 KIF27Q86VH2 1401 aa16.39■□□□□ 0.21
SLC5A6-217ENST00000488743 ERICH3Q5RHP9 1530 aa16.38■□□□□ 0.21
SLC5A6-217ENST00000488743 A0A0U1RQG5 324 aaPredicted RBP16.38■□□□□ 0.21
SLC5A6-217ENST00000488743 TARBP1Q13395 1621 aaKnown RBP16.37■□□□□ 0.21
SLC5A6-217ENST00000488743 PRXQ9BXM0 1461 aa16.36■□□□□ 0.21
SLC5A6-217ENST00000488743 ABCA10Q8WWZ4 1543 aa16.36■□□□□ 0.21
SLC5A6-217ENST00000488743 BRPF3Q9ULD4 1205 aa16.33■□□□□ 0.21
SLC5A6-217ENST00000488743 ARAP1Q96P48 1450 aa16.33■□□□□ 0.2
SLC5A6-217ENST00000488743 P3H3Q8IVL6 736 aa16.33■□□□□ 0.2
SLC5A6-217ENST00000488743 CARMIL1Q5VZK9 1371 aa16.32■□□□□ 0.2
SLC5A6-217ENST00000488743 SNAPC4Q5SXM2 1469 aa16.32■□□□□ 0.2
SLC5A6-217ENST00000488743 EIF4G3O43432 1585 aaKnown RBP16.3■□□□□ 0.2
SLC5A6-217ENST00000488743 KANK4Q5T7N3 995 aaPredicted RBP16.28■□□□□ 0.2
SLC5A6-217ENST00000488743 GRIN2BQ13224 1484 aa16.27■□□□□ 0.19
SLC5A6-217ENST00000488743 DHX57Q6P158 1386 aaKnown RBP16.25■□□□□ 0.19
SLC5A6-217ENST00000488743 OSCARQ8IYS5 282 aa16.25■□□□□ 0.19
SLC5A6-217ENST00000488743 RSPH6AQ9H0K4 717 aa16.24■□□□□ 0.19
SLC5A6-217ENST00000488743 ZBTB47Q9UFB7 747 aaPredicted RBP16.24■□□□□ 0.19
SLC5A6-217ENST00000488743 NEFMP07197 916 aa16.2■□□□□ 0.18
SLC5A6-217ENST00000488743 ARID3CA6NKF2 412 aa16.2■□□□□ 0.18
SLC5A6-217ENST00000488743 ANP32AP39687 249 aaKnown RBP16.2■□□□□ 0.18
SLC5A6-217ENST00000488743 RRBP1Q9P2E9 1410 aaKnown RBP16.19■□□□□ 0.18
SLC5A6-217ENST00000488743 ARHGAP35Q9NRY4 1499 aa16.17■□□□□ 0.18
SLC5A6-217ENST00000488743 C11orf95C9JLR9 678 aaPredicted RBP16.17■□□□□ 0.18
SLC5A6-217ENST00000488743 ABCA5Q8WWZ7 1642 aa16.17■□□□□ 0.18
SLC5A6-217ENST00000488743 LAS1LQ9Y4W2 734 aaKnown RBP16.16■□□□□ 0.18
SLC5A6-217ENST00000488743 CCNB3Q8WWL7 1395 aa16.16■□□□□ 0.18
SLC5A6-217ENST00000488743 IPO9Q96P70 1041 aaKnown RBP16.16■□□□□ 0.18
SLC5A6-217ENST00000488743 FHAD1B1AJZ9 1412 aa16.14■□□□□ 0.17
SLC5A6-217ENST00000488743 PDE4CQ08493 712 aa16.14■□□□□ 0.17
SLC5A6-217ENST00000488743 ATP1B4Q9UN42 357 aaPredicted RBP16.14■□□□□ 0.17
SLC5A6-217ENST00000488743 WDR97A6NE52 1622 aa16.14■□□□□ 0.17
SLC5A6-217ENST00000488743 B4GALNT3Q6L9W6 998 aa16.14■□□□□ 0.17
SLC5A6-217ENST00000488743 WASHC2AQ641Q2 1341 aa16.13■□□□□ 0.17
SLC5A6-217ENST00000488743 JPH4Q96JJ6 628 aa16.13■□□□□ 0.17
SLC5A6-217ENST00000488743 RBM10P98175 930 aaKnown RBP16.12■□□□□ 0.17
SLC5A6-217ENST00000488743 DDX10Q13206 875 aaKnown RBP16.12■□□□□ 0.17
SLC5A6-217ENST00000488743 SYNJ2O15056 1496 aa16.11■□□□□ 0.17
SLC5A6-217ENST00000488743 CYB5RLQ6IPT4 315 aa16.09■□□□□ 0.17
SLC5A6-217ENST00000488743 GRIN2AQ12879 1464 aa16.09■□□□□ 0.17
SLC5A6-217ENST00000488743 MAGI1Q96QZ7 1491 aaPredicted RBP16.08■□□□□ 0.17
SLC5A6-217ENST00000488743 PBRM1Q86U86 1689 aa16.08■□□□□ 0.16
SLC5A6-217ENST00000488743 WASHC2CQ9Y4E1 1318 aa16.08■□□□□ 0.16
SLC5A6-217ENST00000488743 FGD1P98174 961 aa16.08■□□□□ 0.16
SLC5A6-217ENST00000488743 PPP4R2Q9NY27 417 aa16.07■□□□□ 0.16
SLC5A6-217ENST00000488743 AAMPQ13685 434 aa16.04■□□□□ 0.16
SLC5A6-217ENST00000488743 AEBP2Q6ZN18 517 aaPredicted RBP16.04■□□□□ 0.16
SLC5A6-217ENST00000488743 ADAMTS12P58397 1594 aa16.03■□□□□ 0.16
SLC5A6-217ENST00000488743 TIAM1Q13009 1591 aa16.03■□□□□ 0.16
SLC5A6-217ENST00000488743 NPM2Q86SE8 214 aaKnown RBP16.03■□□□□ 0.16
SLC5A6-217ENST00000488743 RAB3GAP2Q9H2M9 1393 aa16.02■□□□□ 0.16
SLC5A6-217ENST00000488743 HSP90AA2PQ14568 343 aaPredicted RBP16.02■□□□□ 0.16
SLC5A6-217ENST00000488743 CHD1O14646 1710 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms