RNA–Protein interactions for RNA: ENST00000487697.1

LRCH4-207, Transcript of leucine rich repeats and calponin homology domain containing 4, humanhuman

TSL 3

Gene LRCH4, Length 756 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4-207ENST00000487697 RAD54L2Q9Y4B4 1467 aa17.21■□□□□ 0.35
LRCH4-207ENST00000487697 FOXD1Q16676 465 aa17.19■□□□□ 0.34
LRCH4-207ENST00000487697 SOGA1O94964 1423 aa17.19■□□□□ 0.34
LRCH4-207ENST00000487697 FGD5Q6ZNL6 1462 aa17.18■□□□□ 0.34
LRCH4-207ENST00000487697 TDRD9Q8NDG6 1382 aaKnown RBP17.16■□□□□ 0.34
LRCH4-207ENST00000487697 WDR97A6NE52 1622 aa17.14■□□□□ 0.33
LRCH4-207ENST00000487697 ATXN8OSP0DMR3 200 aa17.14■□□□□ 0.33
LRCH4-207ENST00000487697 CYB5RLQ6IPT4 315 aa17.14■□□□□ 0.33
LRCH4-207ENST00000487697 SNAPC4Q5SXM2 1469 aa17.13■□□□□ 0.33
LRCH4-207ENST00000487697 CUX1P39880 1505 aa17.13■□□□□ 0.33
LRCH4-207ENST00000487697 KDM2AQ9Y2K7 1162 aa17.12■□□□□ 0.33
LRCH4-207ENST00000487697 TMEM132AQ24JP5 1023 aa17.11■□□□□ 0.33
LRCH4-207ENST00000487697 ARAP1Q96P48 1450 aa17.1■□□□□ 0.33
LRCH4-207ENST00000487697 MAGI1Q96QZ7 1491 aaPredicted RBP17.08■□□□□ 0.32
LRCH4-207ENST00000487697 GRIN2BQ13224 1484 aa17.07■□□□□ 0.32
LRCH4-207ENST00000487697 CHMP7Q8WUX9 453 aaPredicted RBP17.07■□□□□ 0.32
LRCH4-207ENST00000487697 SYNJ1O43426 1573 aa17.06■□□□□ 0.32
LRCH4-207ENST00000487697 C14orf37Q86TY3 774 aa17.05■□□□□ 0.32
LRCH4-207ENST00000487697 SUPT5HO00267 1087 aaKnown RBP17.04■□□□□ 0.32
LRCH4-207ENST00000487697 CLASP1Q7Z460 1538 aa17.04■□□□□ 0.32
LRCH4-207ENST00000487697 PBRM1Q86U86 1689 aa17.04■□□□□ 0.32
LRCH4-207ENST00000487697 TRHP20396 242 aaPredicted RBP17.02■□□□□ 0.32
LRCH4-207ENST00000487697 SYNJ2O15056 1496 aa17.01■□□□□ 0.31
LRCH4-207ENST00000487697 PODXL2Q9NZ53 605 aa17.01■□□□□ 0.31
LRCH4-207ENST00000487697 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.01■□□□□ 0.31
LRCH4-207ENST00000487697 GAPVD1Q14C86 1478 aa16.99■□□□□ 0.31
LRCH4-207ENST00000487697 ABCA5Q8WWZ7 1642 aa16.96■□□□□ 0.3
LRCH4-207ENST00000487697 ABCA10Q8WWZ4 1543 aa16.96■□□□□ 0.3
LRCH4-207ENST00000487697 WRNQ14191 1432 aaPredicted RBP eCLIP16.89■□□□□ 0.29
LRCH4-207ENST00000487697 FBXO3Q9UK99 471 aa16.89■□□□□ 0.29
LRCH4-207ENST00000487697 BIVM-ERCC5R4GMW8 1640 aa16.87■□□□□ 0.29
LRCH4-207ENST00000487697 TOP2BQ02880 1626 aa16.86■□□□□ 0.29
LRCH4-207ENST00000487697 NBR1Q14596 966 aa16.86■□□□□ 0.29
LRCH4-207ENST00000487697 ADAMTS12P58397 1594 aa16.85■□□□□ 0.29
LRCH4-207ENST00000487697 GRIN2AQ12879 1464 aa16.85■□□□□ 0.29
LRCH4-207ENST00000487697 BBXQ8WY36 941 aaPredicted RBP16.84■□□□□ 0.29
LRCH4-207ENST00000487697 SCAF1Q9H7N4 1312 aaKnown RBP16.84■□□□□ 0.29
LRCH4-207ENST00000487697 CEP170Q5SW79 1584 aa16.79■□□□□ 0.28
LRCH4-207ENST00000487697 FHAD1B1AJZ9 1412 aa16.78■□□□□ 0.28
LRCH4-207ENST00000487697 PIAS4Q8N2W9 510 aaPredicted RBP16.77■□□□□ 0.28
LRCH4-207ENST00000487697 NUP160Q12769 1436 aa16.77■□□□□ 0.27
LRCH4-207ENST00000487697 ERCC6L2Q5T890 1561 aa16.77■□□□□ 0.27
LRCH4-207ENST00000487697 ERICH3Q5RHP9 1530 aa16.76■□□□□ 0.27
LRCH4-207ENST00000487697 PAXIP1Q6ZW49 1069 aaPredicted RBP16.76■□□□□ 0.27
LRCH4-207ENST00000487697 PELP1Q8IZL8 1130 aaKnown RBP16.76■□□□□ 0.27
LRCH4-207ENST00000487697 TTBK1Q5TCY1 1321 aaPredicted RBP16.75■□□□□ 0.27
LRCH4-207ENST00000487697 SHROOM2Q13796 1616 aa16.71■□□□□ 0.27
LRCH4-207ENST00000487697 CFAP44Q96MT7 982 aa16.7■□□□□ 0.26
LRCH4-207ENST00000487697 APLP2Q06481 763 aa16.68■□□□□ 0.26
LRCH4-207ENST00000487697 MYCNP04198 464 aaPredicted RBP16.66■□□□□ 0.26
LRCH4-207ENST00000487697 MYT1Q01538 1121 aa16.66■□□□□ 0.26
LRCH4-207ENST00000487697 NPM2Q86SE8 214 aaKnown RBP16.64■□□□□ 0.25
LRCH4-207ENST00000487697 PRG4Q92954 1404 aaPredicted RBP16.63■□□□□ 0.25
LRCH4-207ENST00000487697 RUSC2Q8N2Y8 1516 aa16.61■□□□□ 0.25
LRCH4-207ENST00000487697 JPH4Q96JJ6 628 aa16.58■□□□□ 0.24
LRCH4-207ENST00000487697 PKD2Q13563 968 aa16.56■□□□□ 0.24
LRCH4-207ENST00000487697 CUL7Q14999 1698 aa16.54■□□□□ 0.24
LRCH4-207ENST00000487697 KIF27Q86VH2 1401 aa16.53■□□□□ 0.24
LRCH4-207ENST00000487697 KIF13AQ9H1H9 1805 aa16.53■□□□□ 0.24
LRCH4-207ENST00000487697 KLHL34Q8N239 644 aa16.51■□□□□ 0.23
LRCH4-207ENST00000487697 SPRYD3Q8NCJ5 442 aa16.51■□□□□ 0.23
LRCH4-207ENST00000487697 TSHZ2Q9NRE2 1034 aa16.5■□□□□ 0.23
LRCH4-207ENST00000487697 NPM1P06748 294 aaKnown RBP eCLIP16.49■□□□□ 0.23
LRCH4-207ENST00000487697 VASPP50552 380 aaPredicted RBP16.49■□□□□ 0.23
LRCH4-207ENST00000487697 KIAA0586Q9BVV6 1533 aa16.49■□□□□ 0.23
LRCH4-207ENST00000487697 IGF1RP08069 1367 aa16.47■□□□□ 0.23
LRCH4-207ENST00000487697 ADCY10Q96PN6 1610 aa16.46■□□□□ 0.23
LRCH4-207ENST00000487697 RNF216Q9NWF9 866 aaPredicted RBP16.45■□□□□ 0.22
LRCH4-207ENST00000487697 MAPKBP1O60336 1514 aa16.45■□□□□ 0.22
LRCH4-207ENST00000487697 SLC4A2P04920 1241 aa16.44■□□□□ 0.22
LRCH4-207ENST00000487697 ABCC10Q5T3U5 1492 aa16.43■□□□□ 0.22
LRCH4-207ENST00000487697 FAM69CQ0P6D2 419 aa16.43■□□□□ 0.22
LRCH4-207ENST00000487697 DIP2BQ9P265 1576 aa16.42■□□□□ 0.22
LRCH4-207ENST00000487697 CARMIL1Q5VZK9 1371 aa16.41■□□□□ 0.22
LRCH4-207ENST00000487697 CARMIL2Q6F5E8 1435 aa16.36■□□□□ 0.21
LRCH4-207ENST00000487697 IQGAP2Q13576 1575 aa16.36■□□□□ 0.21
LRCH4-207ENST00000487697 PTPRGP23470 1445 aa16.36■□□□□ 0.21
LRCH4-207ENST00000487697 IFNLR1Q8IU57 520 aaPredicted RBP16.35■□□□□ 0.21
LRCH4-207ENST00000487697 TSPOAP1O95153 1857 aa16.34■□□□□ 0.21
LRCH4-207ENST00000487697 TNIKQ9UKE5 1360 aa16.33■□□□□ 0.2
LRCH4-207ENST00000487697 KDM6BO15054 1643 aa16.33■□□□□ 0.2
LRCH4-207ENST00000487697 TRIM26Q12899 539 aaPredicted RBP16.3■□□□□ 0.2
LRCH4-207ENST00000487697 ABCC2Q92887 1545 aa16.29■□□□□ 0.2
LRCH4-207ENST00000487697 RAPGEF2Q9Y4G8 1499 aa16.26■□□□□ 0.19
LRCH4-207ENST00000487697 PLB1Q6P1J6 1458 aa16.24■□□□□ 0.19
LRCH4-207ENST00000487697 ASXL2Q76L83 1435 aa16.24■□□□□ 0.19
LRCH4-207ENST00000487697 DISP1Q96F81 1524 aa16.24■□□□□ 0.19
LRCH4-207ENST00000487697 UACAQ9BZF9 1416 aa16.23■□□□□ 0.19
LRCH4-207ENST00000487697 UHRF1BP1LA0JNW5 1464 aa16.22■□□□□ 0.19
LRCH4-207ENST00000487697 UGGT2Q9NYU1 1516 aa16.22■□□□□ 0.19
LRCH4-207ENST00000487697 KIAA0556O60303 1618 aa16.21■□□□□ 0.19
LRCH4-207ENST00000487697 CTTNBP2Q8WZ74 1663 aa16.19■□□□□ 0.18
LRCH4-207ENST00000487697 GLI2P10070 1586 aa16.19■□□□□ 0.18
LRCH4-207ENST00000487697 ECM2O94769 699 aaPredicted RBP16.19■□□□□ 0.18
LRCH4-207ENST00000487697 UBTFP17480 764 aaKnown RBP16.18■□□□□ 0.18
LRCH4-207ENST00000487697 ZCCHC11Q5TAX3 1644 aaKnown RBP16.17■□□□□ 0.18
LRCH4-207ENST00000487697 PPRC1Q5VV67 1664 aaKnown RBP16.17■□□□□ 0.18
LRCH4-207ENST00000487697 KDM5BQ9UGL1 1544 aa16.15■□□□□ 0.18
LRCH4-207ENST00000487697 EPRSP07814 1512 aaKnown RBP16.14■□□□□ 0.17
LRCH4-207ENST00000487697 MAP3K4Q9Y6R4 1608 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms