RNA–Protein interactions for RNA: ENST00000487656.1

MACF1-221, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 323 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-221ENST00000487656 TARBP1Q13395 1621 aaKnown RBP10.18□□□□□ -0.78
MACF1-221ENST00000487656 TRHP20396 242 aaPredicted RBP10.16□□□□□ -0.78
MACF1-221ENST00000487656 RNF39Q9H2S5 420 aa10.16□□□□□ -0.78
MACF1-221ENST00000487656 POLA1P09884 1462 aaPredicted RBP10.16□□□□□ -0.78
MACF1-221ENST00000487656 SOGA1O94964 1423 aa10.16□□□□□ -0.78
MACF1-221ENST00000487656 TDRD9Q8NDG6 1382 aaKnown RBP10.14□□□□□ -0.79
MACF1-221ENST00000487656 RAD54L2Q9Y4B4 1467 aa10.13□□□□□ -0.79
MACF1-221ENST00000487656 CHMP7Q8WUX9 453 aaPredicted RBP10.13□□□□□ -0.79
MACF1-221ENST00000487656 ZNF219Q9P2Y4 722 aaPredicted RBP10.13□□□□□ -0.79
MACF1-221ENST00000487656 WDR97A6NE52 1622 aa10.11□□□□□ -0.79
MACF1-221ENST00000487656 ARAP1Q96P48 1450 aa10.1□□□□□ -0.79
MACF1-221ENST00000487656 C1QBPQ07021 282 aaKnown RBP10.09□□□□□ -0.79
MACF1-221ENST00000487656 FGD5Q6ZNL6 1462 aa10.09□□□□□ -0.79
MACF1-221ENST00000487656 SYNJ1O43426 1573 aa10.07□□□□□ -0.8
MACF1-221ENST00000487656 SNAPC4Q5SXM2 1469 aa10.07□□□□□ -0.8
MACF1-221ENST00000487656 MAGI1Q96QZ7 1491 aaPredicted RBP10.07□□□□□ -0.8
MACF1-221ENST00000487656 FKBP8Q14318 412 aa10.07□□□□□ -0.8
MACF1-221ENST00000487656 GRIN2BQ13224 1484 aa10.06□□□□□ -0.8
MACF1-221ENST00000487656 SPINK5Q9NQ38 1064 aaPredicted RBP10.05□□□□□ -0.8
MACF1-221ENST00000487656 CUX1P39880 1505 aa10.05□□□□□ -0.8
MACF1-221ENST00000487656 CAPN15O75808 1086 aa10.04□□□□□ -0.8
MACF1-221ENST00000487656 SYNJ2O15056 1496 aa10.04□□□□□ -0.8
MACF1-221ENST00000487656 CLASP1Q7Z460 1538 aa10.03□□□□□ -0.8
MACF1-221ENST00000487656 GAPVD1Q14C86 1478 aa10.02□□□□□ -0.81
MACF1-221ENST00000487656 PBRM1Q86U86 1689 aa10□□□□□ -0.81
MACF1-221ENST00000487656 ABCA10Q8WWZ4 1543 aa9.97□□□□□ -0.81
MACF1-221ENST00000487656 SUPT5HO00267 1087 aaKnown RBP9.97□□□□□ -0.81
MACF1-221ENST00000487656 WRNQ14191 1432 aaPredicted RBP eCLIP9.95□□□□□ -0.82
MACF1-221ENST00000487656 ABCA5Q8WWZ7 1642 aa9.95□□□□□ -0.82
MACF1-221ENST00000487656 POLA2Q14181 598 aa9.94□□□□□ -0.82
MACF1-221ENST00000487656 GRIN2AQ12879 1464 aa9.91□□□□□ -0.82
MACF1-221ENST00000487656 FHAD1B1AJZ9 1412 aa9.89□□□□□ -0.83
MACF1-221ENST00000487656 TOP2BQ02880 1626 aa9.88□□□□□ -0.83
MACF1-221ENST00000487656 BIVM-ERCC5R4GMW8 1640 aa9.88□□□□□ -0.83
MACF1-221ENST00000487656 NUP160Q12769 1436 aa9.88□□□□□ -0.83
MACF1-221ENST00000487656 ADAMTS12P58397 1594 aa9.88□□□□□ -0.83
MACF1-221ENST00000487656 CEP170Q5SW79 1584 aa9.88□□□□□ -0.83
MACF1-221ENST00000487656 ERCC6L2Q5T890 1561 aa9.86□□□□□ -0.83
MACF1-221ENST00000487656 ERICH3Q5RHP9 1530 aa9.86□□□□□ -0.83
MACF1-221ENST00000487656 ABCB7O75027 752 aa9.85□□□□□ -0.83
MACF1-221ENST00000487656 SHROOM2Q13796 1616 aa9.85□□□□□ -0.83
MACF1-221ENST00000487656 MKRN4PQ13434 485 aaPredicted RBP9.84□□□□□ -0.83
MACF1-221ENST00000487656 JPH4Q96JJ6 628 aa9.84□□□□□ -0.83
MACF1-221ENST00000487656 NPM1P06748 294 aaKnown RBP eCLIP9.83□□□□□ -0.84
MACF1-221ENST00000487656 PRG4Q92954 1404 aaPredicted RBP9.82□□□□□ -0.84
MACF1-221ENST00000487656 ZBTB12Q9Y330 459 aaPredicted RBP9.81□□□□□ -0.84
MACF1-221ENST00000487656 SPDYE4A6NLX3 237 aa9.8□□□□□ -0.84
MACF1-221ENST00000487656 KIF13AQ9H1H9 1805 aa9.79□□□□□ -0.84
MACF1-221ENST00000487656 DSG3P32926 999 aa9.78□□□□□ -0.84
MACF1-221ENST00000487656 FAM69CQ0P6D2 419 aa9.77□□□□□ -0.85
MACF1-221ENST00000487656 CACNB1Q02641 598 aaPredicted RBP9.75□□□□□ -0.85
MACF1-221ENST00000487656 ABCC10Q5T3U5 1492 aa9.73□□□□□ -0.85
MACF1-221ENST00000487656 RUSC2Q8N2Y8 1516 aa9.73□□□□□ -0.85
MACF1-221ENST00000487656 KIAA0586Q9BVV6 1533 aa9.72□□□□□ -0.85
MACF1-221ENST00000487656 IGF1RP08069 1367 aa9.72□□□□□ -0.85
MACF1-221ENST00000487656 KIF27Q86VH2 1401 aa9.72□□□□□ -0.85
MACF1-221ENST00000487656 MAPKBP1O60336 1514 aa9.71□□□□□ -0.86
MACF1-221ENST00000487656 CUL7Q14999 1698 aa9.7□□□□□ -0.86
MACF1-221ENST00000487656 TSPOAP1O95153 1857 aa9.68□□□□□ -0.86
MACF1-221ENST00000487656 ADCY10Q96PN6 1610 aa9.68□□□□□ -0.86
MACF1-221ENST00000487656 DIP2BQ9P265 1576 aa9.67□□□□□ -0.86
MACF1-221ENST00000487656 PTPRGP23470 1445 aa9.67□□□□□ -0.86
MACF1-221ENST00000487656 TTBK1Q5TCY1 1321 aaPredicted RBP9.67□□□□□ -0.86
MACF1-221ENST00000487656 FBXO3Q9UK99 471 aa9.67□□□□□ -0.86
MACF1-221ENST00000487656 CARMIL2Q6F5E8 1435 aa9.66□□□□□ -0.86
MACF1-221ENST00000487656 CARMIL1Q5VZK9 1371 aa9.66□□□□□ -0.86
MACF1-221ENST00000487656 AMER1Q5JTC6 1135 aaPredicted RBP9.66□□□□□ -0.86
MACF1-221ENST00000487656 KDM6BO15054 1643 aa9.65□□□□□ -0.86
MACF1-221ENST00000487656 TNIKQ9UKE5 1360 aa9.63□□□□□ -0.87
MACF1-221ENST00000487656 PROM2Q8N271 834 aa9.63□□□□□ -0.87
MACF1-221ENST00000487656 KDM4FA0A1W2PPD8 638 aa9.61□□□□□ -0.87
MACF1-221ENST00000487656 RTN4Q9NQC3 1192 aaKnown RBP9.61□□□□□ -0.87
MACF1-221ENST00000487656 ABCC2Q92887 1545 aa9.61□□□□□ -0.87
MACF1-221ENST00000487656 PLB1Q6P1J6 1458 aa9.6□□□□□ -0.87
MACF1-221ENST00000487656 IQGAP2Q13576 1575 aa9.6□□□□□ -0.87
MACF1-221ENST00000487656 ASXL2Q76L83 1435 aa9.59□□□□□ -0.87
MACF1-221ENST00000487656 UACAQ9BZF9 1416 aa9.58□□□□□ -0.88
MACF1-221ENST00000487656 ZNF692Q9BU19 519 aaPredicted RBP9.58□□□□□ -0.88
MACF1-221ENST00000487656 UHRF1BP1LA0JNW5 1464 aa9.58□□□□□ -0.88
MACF1-221ENST00000487656 GLI2P10070 1586 aa9.58□□□□□ -0.88
MACF1-221ENST00000487656 SPDYE2BA6NHP3 402 aa9.57□□□□□ -0.88
MACF1-221ENST00000487656 SPDYE6P0CI01 402 aa9.57□□□□□ -0.88
MACF1-221ENST00000487656 SPDYE2Q495Y8 402 aa9.57□□□□□ -0.88
MACF1-221ENST00000487656 RAPGEF2Q9Y4G8 1499 aa9.55□□□□□ -0.88
MACF1-221ENST00000487656 DISP1Q96F81 1524 aa9.54□□□□□ -0.88
MACF1-221ENST00000487656 UGGT2Q9NYU1 1516 aa9.53□□□□□ -0.88
MACF1-221ENST00000487656 KDM5BQ9UGL1 1544 aa9.53□□□□□ -0.88
MACF1-221ENST00000487656 PPRC1Q5VV67 1664 aaKnown RBP9.53□□□□□ -0.88
MACF1-221ENST00000487656 FAM9AQ8IZU1 332 aaPredicted RBP9.53□□□□□ -0.88
MACF1-221ENST00000487656 TEX14Q8IWB6 1497 aa9.53□□□□□ -0.88
MACF1-221ENST00000487656 EPRSP07814 1512 aaKnown RBP9.51□□□□□ -0.89
MACF1-221ENST00000487656 ZCCHC11Q5TAX3 1644 aaKnown RBP9.51□□□□□ -0.89
MACF1-221ENST00000487656 MAP3K4Q9Y6R4 1608 aa9.51□□□□□ -0.89
MACF1-221ENST00000487656 KIAA0556O60303 1618 aa9.49□□□□□ -0.89
MACF1-221ENST00000487656 VASPP50552 380 aaPredicted RBP9.49□□□□□ -0.89
MACF1-221ENST00000487656 ADGRL1O94910 1474 aa9.48□□□□□ -0.89
MACF1-221ENST00000487656 GOLGA3Q08378 1498 aa9.48□□□□□ -0.89
MACF1-221ENST00000487656 KCNH8Q96L42 1107 aa9.48□□□□□ -0.89
MACF1-221ENST00000487656 SSUH2Q9Y2M2 353 aa9.48□□□□□ -0.89
MACF1-221ENST00000487656 CTTNBP2Q8WZ74 1663 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms