RNA–Protein interactions for RNA: ENST00000487240.3

SOX2-OT-210, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 751 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-210ENST00000487240 SPDYE2BA6NHP3 402 aa11.85□□□□□ -0.51
SOX2-OT-210ENST00000487240 SPDYE6P0CI01 402 aa11.85□□□□□ -0.51
SOX2-OT-210ENST00000487240 SPDYE2Q495Y8 402 aa11.85□□□□□ -0.51
SOX2-OT-210ENST00000487240 RTN4Q9NQC3 1192 aaKnown RBP11.85□□□□□ -0.51
SOX2-OT-210ENST00000487240 WDR62O43379 1518 aa11.83□□□□□ -0.52
SOX2-OT-210ENST00000487240 CCDC88BA6NC98 1476 aa11.83□□□□□ -0.52
SOX2-OT-210ENST00000487240 SSUH2Q9Y2M2 353 aa11.78□□□□□ -0.52
SOX2-OT-210ENST00000487240 URB2Q14146 1524 aaKnown RBP11.76□□□□□ -0.53
SOX2-OT-210ENST00000487240 PRDM2Q13029 1718 aa11.75□□□□□ -0.53
SOX2-OT-210ENST00000487240 VASPP50552 380 aaPredicted RBP11.74□□□□□ -0.53
SOX2-OT-210ENST00000487240 SUPT5HO00267 1087 aaKnown RBP11.66□□□□□ -0.54
SOX2-OT-210ENST00000487240 TOPBP1Q92547 1522 aa11.65□□□□□ -0.55
SOX2-OT-210ENST00000487240 STAG3Q9UJ98 1225 aa11.61□□□□□ -0.55
SOX2-OT-210ENST00000487240 IFT140Q96RY7 1462 aa11.61□□□□□ -0.55
SOX2-OT-210ENST00000487240 DNMBPQ6XZF7 1577 aa11.61□□□□□ -0.55
SOX2-OT-210ENST00000487240 ZNF608Q9ULD9 1512 aaPredicted RBP11.6□□□□□ -0.55
SOX2-OT-210ENST00000487240 ABCC8Q09428 1581 aa11.59□□□□□ -0.55
SOX2-OT-210ENST00000487240 IFNLR1Q8IU57 520 aaPredicted RBP11.59□□□□□ -0.55
SOX2-OT-210ENST00000487240 RBM42Q9BTD8 480 aaKnown RBP11.59□□□□□ -0.55
SOX2-OT-210ENST00000487240 EIF4G3O43432 1585 aaKnown RBP11.54□□□□□ -0.56
SOX2-OT-210ENST00000487240 POLA1P09884 1462 aaPredicted RBP11.53□□□□□ -0.56
SOX2-OT-210ENST00000487240 TRIM41Q8WV44 630 aa11.52□□□□□ -0.57
SOX2-OT-210ENST00000487240 TARBP1Q13395 1621 aaKnown RBP11.52□□□□□ -0.57
SOX2-OT-210ENST00000487240 AQRO60306 1485 aaKnown RBP eCLIP11.51□□□□□ -0.57
SOX2-OT-210ENST00000487240 RAD54L2Q9Y4B4 1467 aa11.51□□□□□ -0.57
SOX2-OT-210ENST00000487240 PLCD3Q8N3E9 789 aa11.5□□□□□ -0.57
SOX2-OT-210ENST00000487240 AKT1S1Q96B36 256 aa11.5□□□□□ -0.57
SOX2-OT-210ENST00000487240 FGD5Q6ZNL6 1462 aa11.5□□□□□ -0.57
SOX2-OT-210ENST00000487240 CUX1P39880 1505 aa11.5□□□□□ -0.57
SOX2-OT-210ENST00000487240 KLHL34Q8N239 644 aa11.49□□□□□ -0.57
SOX2-OT-210ENST00000487240 SOGA1O94964 1423 aa11.49□□□□□ -0.57
SOX2-OT-210ENST00000487240 TDRD9Q8NDG6 1382 aaKnown RBP11.47□□□□□ -0.57
SOX2-OT-210ENST00000487240 MIER1Q8N108 512 aa11.46□□□□□ -0.57
SOX2-OT-210ENST00000487240 SPDYE1Q8NFV5 336 aaPredicted RBP11.43□□□□□ -0.58
SOX2-OT-210ENST00000487240 SPOCK2Q92563 424 aa11.43□□□□□ -0.58
SOX2-OT-210ENST00000487240 CHD1O14646 1710 aa11.43□□□□□ -0.58
SOX2-OT-210ENST00000487240 PLEKHG5O94827 1062 aa11.42□□□□□ -0.58
SOX2-OT-210ENST00000487240 SNAPC4Q5SXM2 1469 aa11.4□□□□□ -0.58
SOX2-OT-210ENST00000487240 RIMBP3CA6NJZ7 1639 aa11.39□□□□□ -0.59
SOX2-OT-210ENST00000487240 RIMBP3BA6NNM3 1639 aa11.39□□□□□ -0.59
SOX2-OT-210ENST00000487240 RIMBP3Q9UFD9 1639 aa11.39□□□□□ -0.59
SOX2-OT-210ENST00000487240 REM2Q8IYK8 340 aaPredicted RBP11.39□□□□□ -0.59
SOX2-OT-210ENST00000487240 WDR97A6NE52 1622 aa11.38□□□□□ -0.59
SOX2-OT-210ENST00000487240 CLEC11AQ9Y240 323 aa11.37□□□□□ -0.59
SOX2-OT-210ENST00000487240 GRIN2BQ13224 1484 aa11.37□□□□□ -0.59
SOX2-OT-210ENST00000487240 ARHGEF11O15085 1522 aa11.36□□□□□ -0.59
SOX2-OT-210ENST00000487240 ZBTB47Q9UFB7 747 aaPredicted RBP11.36□□□□□ -0.59
SOX2-OT-210ENST00000487240 WRNQ14191 1432 aaPredicted RBP eCLIP11.35□□□□□ -0.59
SOX2-OT-210ENST00000487240 CHMP7Q8WUX9 453 aaPredicted RBP11.35□□□□□ -0.59
SOX2-OT-210ENST00000487240 GAPVD1Q14C86 1478 aa11.35□□□□□ -0.59
SOX2-OT-210ENST00000487240 SYNJ1O43426 1573 aa11.35□□□□□ -0.59
SOX2-OT-210ENST00000487240 PBRM1Q86U86 1689 aa11.34□□□□□ -0.59
SOX2-OT-210ENST00000487240 MAGI1Q96QZ7 1491 aaPredicted RBP11.34□□□□□ -0.59
SOX2-OT-210ENST00000487240 ABCA10Q8WWZ4 1543 aa11.34□□□□□ -0.59
SOX2-OT-210ENST00000487240 TOP2BQ02880 1626 aa11.33□□□□□ -0.6
SOX2-OT-210ENST00000487240 BIVM-ERCC5R4GMW8 1640 aa11.33□□□□□ -0.6
SOX2-OT-210ENST00000487240 ABCA5Q8WWZ7 1642 aa11.32□□□□□ -0.6
SOX2-OT-210ENST00000487240 PKD2Q13563 968 aa11.32□□□□□ -0.6
SOX2-OT-210ENST00000487240 SYNJ2O15056 1496 aa11.32□□□□□ -0.6
SOX2-OT-210ENST00000487240 PRR29P0C7W0 189 aa11.31□□□□□ -0.6
SOX2-OT-210ENST00000487240 CYB5RLQ6IPT4 315 aa11.3□□□□□ -0.6
SOX2-OT-210ENST00000487240 CLASP1Q7Z460 1538 aa11.28□□□□□ -0.6
SOX2-OT-210ENST00000487240 ARAP1Q96P48 1450 aa11.26□□□□□ -0.61
SOX2-OT-210ENST00000487240 PITPNM1O00562 1244 aa11.25□□□□□ -0.61
SOX2-OT-210ENST00000487240 SLC24A1O60721 1099 aa11.24□□□□□ -0.61
SOX2-OT-210ENST00000487240 ADAMTS12P58397 1594 aa11.24□□□□□ -0.61
SOX2-OT-210ENST00000487240 GRIN2AQ12879 1464 aa11.23□□□□□ -0.61
SOX2-OT-210ENST00000487240 ECM2O94769 699 aaPredicted RBP11.22□□□□□ -0.61
SOX2-OT-210ENST00000487240 CREBZFQ9NS37 354 aa11.22□□□□□ -0.61
SOX2-OT-210ENST00000487240 FHAD1B1AJZ9 1412 aa11.2□□□□□ -0.62
SOX2-OT-210ENST00000487240 CIZ1Q9ULV3 898 aaPredicted RBP11.2□□□□□ -0.62
SOX2-OT-210ENST00000487240 ERICH3Q5RHP9 1530 aa11.19□□□□□ -0.62
SOX2-OT-210ENST00000487240 CEP170Q5SW79 1584 aa11.19□□□□□ -0.62
SOX2-OT-210ENST00000487240 NUP160Q12769 1436 aa11.17□□□□□ -0.62
SOX2-OT-210ENST00000487240 ERCC6L2Q5T890 1561 aa11.15□□□□□ -0.62
SOX2-OT-210ENST00000487240 MNX1P50219 401 aaPredicted RBP11.13□□□□□ -0.63
SOX2-OT-210ENST00000487240 NUBP1P53384 320 aa11.13□□□□□ -0.63
SOX2-OT-210ENST00000487240 KIF27Q86VH2 1401 aa11.12□□□□□ -0.63
SOX2-OT-210ENST00000487240 GSE1Q14687 1217 aa11.11□□□□□ -0.63
SOX2-OT-210ENST00000487240 IGF1RP08069 1367 aa11.1□□□□□ -0.63
SOX2-OT-210ENST00000487240 SHROOM2Q13796 1616 aa11.09□□□□□ -0.63
SOX2-OT-210ENST00000487240 RGL2O15211 777 aa11.09□□□□□ -0.63
SOX2-OT-210ENST00000487240 RUSC2Q8N2Y8 1516 aa11.08□□□□□ -0.64
SOX2-OT-210ENST00000487240 PRG4Q92954 1404 aaPredicted RBP11.08□□□□□ -0.64
SOX2-OT-210ENST00000487240 DCAF8Q5TAQ9 597 aa11.07□□□□□ -0.64
SOX2-OT-210ENST00000487240 JPH4Q96JJ6 628 aa11.07□□□□□ -0.64
SOX2-OT-210ENST00000487240 CUL7Q14999 1698 aa11.07□□□□□ -0.64
SOX2-OT-210ENST00000487240 NPM1P06748 294 aaKnown RBP eCLIP11.06□□□□□ -0.64
SOX2-OT-210ENST00000487240 FAM212AQ96EL1 285 aa11.06□□□□□ -0.64
SOX2-OT-210ENST00000487240 CHADLQ6NUI6 762 aa11.05□□□□□ -0.64
SOX2-OT-210ENST00000487240 CARMIL1Q5VZK9 1371 aa11.03□□□□□ -0.64
SOX2-OT-210ENST00000487240 RASEFQ8IZ41 740 aa11.02□□□□□ -0.65
SOX2-OT-210ENST00000487240 KIAA0586Q9BVV6 1533 aa11.02□□□□□ -0.65
SOX2-OT-210ENST00000487240 PLCB2Q00722 1185 aa11□□□□□ -0.65
SOX2-OT-210ENST00000487240 TTBK1Q5TCY1 1321 aaPredicted RBP10.99□□□□□ -0.65
SOX2-OT-210ENST00000487240 PRKAR2AP13861 404 aaKnown RBP10.98□□□□□ -0.65
SOX2-OT-210ENST00000487240 FXR2P51116 673 aaKnown RBP eCLIP10.97□□□□□ -0.65
SOX2-OT-210ENST00000487240 CHRDL2Q6WN34 429 aa10.97□□□□□ -0.65
SOX2-OT-210ENST00000487240 FARP1Q9Y4F1 1045 aaPredicted RBP10.97□□□□□ -0.65
SOX2-OT-210ENST00000487240 BBXQ8WY36 941 aaPredicted RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 491.3 ms