RNA–Protein interactions for RNA: ENST00000485535.5

PLXNB1-218, Transcript of plexin B1, humanhuman

TSL 2

Gene PLXNB1, Length 3,264 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB1-218ENST00000485535 ABCA10Q8WWZ4 1543 aa17.93■□□□□ 0.46
PLXNB1-218ENST00000485535 DHX57Q6P158 1386 aaKnown RBP17.93■□□□□ 0.46
PLXNB1-218ENST00000485535 KANK4Q5T7N3 995 aaPredicted RBP17.93■□□□□ 0.46
PLXNB1-218ENST00000485535 IFT140Q96RY7 1462 aa17.89■□□□□ 0.45
PLXNB1-218ENST00000485535 TARBP1Q13395 1621 aaKnown RBP17.89■□□□□ 0.45
PLXNB1-218ENST00000485535 TDRD9Q8NDG6 1382 aaKnown RBP17.87■□□□□ 0.45
PLXNB1-218ENST00000485535 WDR97A6NE52 1622 aa17.85■□□□□ 0.45
PLXNB1-218ENST00000485535 SUPT16HQ9Y5B9 1047 aaKnown RBP17.83■□□□□ 0.44
PLXNB1-218ENST00000485535 IGF1RP08069 1367 aa17.82■□□□□ 0.44
PLXNB1-218ENST00000485535 GAPVD1Q14C86 1478 aa17.81■□□□□ 0.44
PLXNB1-218ENST00000485535 ARAP1Q96P48 1450 aa17.81■□□□□ 0.44
PLXNB1-218ENST00000485535 CCNB3Q8WWL7 1395 aa17.79■□□□□ 0.44
PLXNB1-218ENST00000485535 AQRO60306 1485 aaKnown RBP eCLIP17.79■□□□□ 0.445e-7■■■■■ 35
PLXNB1-218ENST00000485535 ZNF608Q9ULD9 1512 aaPredicted RBP17.78■□□□□ 0.44
PLXNB1-218ENST00000485535 ABCA5Q8WWZ7 1642 aa17.78■□□□□ 0.44
PLXNB1-218ENST00000485535 PRXQ9BXM0 1461 aa17.78■□□□□ 0.44
PLXNB1-218ENST00000485535 ERICH3Q5RHP9 1530 aa17.78■□□□□ 0.44
PLXNB1-218ENST00000485535 ATP1B4Q9UN42 357 aaPredicted RBP17.76■□□□□ 0.43
PLXNB1-218ENST00000485535 CARMIL1Q5VZK9 1371 aa17.73■□□□□ 0.43
PLXNB1-218ENST00000485535 RRBP1Q9P2E9 1410 aaKnown RBP17.72■□□□□ 0.43
PLXNB1-218ENST00000485535 FAM50AQ14320 339 aaKnown RBP17.72■□□□□ 0.43
PLXNB1-218ENST00000485535 GRIN2BQ13224 1484 aa17.7■□□□□ 0.42
PLXNB1-218ENST00000485535 EIF4G3O43432 1585 aaKnown RBP17.7■□□□□ 0.42
PLXNB1-218ENST00000485535 PBRM1Q86U86 1689 aa17.69■□□□□ 0.42
PLXNB1-218ENST00000485535 BCANQ96GW7 911 aa17.68■□□□□ 0.42
PLXNB1-218ENST00000485535 CUL7Q14999 1698 aa17.67■□□□□ 0.42
PLXNB1-218ENST00000485535 RAB3GAP2Q9H2M9 1393 aa17.67■□□□□ 0.42
PLXNB1-218ENST00000485535 DDX10Q13206 875 aaKnown RBP17.67■□□□□ 0.42
PLXNB1-218ENST00000485535 KCNH8Q96L42 1107 aa17.64■□□□□ 0.41
PLXNB1-218ENST00000485535 ARHGAP35Q9NRY4 1499 aa17.63■□□□□ 0.41
PLXNB1-218ENST00000485535 NEFLP07196 543 aa17.62■□□□□ 0.41
PLXNB1-218ENST00000485535 P3H3Q8IVL6 736 aa17.62■□□□□ 0.41
PLXNB1-218ENST00000485535 FHAD1B1AJZ9 1412 aa17.61■□□□□ 0.41
PLXNB1-218ENST00000485535 SIN3AQ96ST3 1273 aa17.6■□□□□ 0.41
PLXNB1-218ENST00000485535 SNAPC4Q5SXM2 1469 aa17.6■□□□□ 0.41
PLXNB1-218ENST00000485535 TSHZ2Q9NRE2 1034 aa17.59■□□□□ 0.41
PLXNB1-218ENST00000485535 FKBP8Q14318 412 aa17.59■□□□□ 0.41
PLXNB1-218ENST00000485535 SETD5Q9C0A6 1442 aa17.58■□□□□ 0.4
PLXNB1-218ENST00000485535 MAGI1Q96QZ7 1491 aaPredicted RBP17.57■□□□□ 0.4
PLXNB1-218ENST00000485535 ADAMTS12P58397 1594 aa17.57■□□□□ 0.4
PLXNB1-218ENST00000485535 HIRIP3Q9BW71 556 aaPredicted RBP17.55■□□□□ 0.4
PLXNB1-218ENST00000485535 CHMP7Q8WUX9 453 aaPredicted RBP17.55■□□□□ 0.4
PLXNB1-218ENST00000485535 FBLN2P98095 1184 aa17.54■□□□□ 0.4
PLXNB1-218ENST00000485535 ANP32CO43423 234 aa17.53■□□□□ 0.4
PLXNB1-218ENST00000485535 SYNJ2O15056 1496 aa17.51■□□□□ 0.39
PLXNB1-218ENST00000485535 TRIM52Q96A61 297 aa17.49■□□□□ 0.39
PLXNB1-218ENST00000485535 GRIN2AQ12879 1464 aa17.48■□□□□ 0.39
PLXNB1-218ENST00000485535 TIAM1Q13009 1591 aa17.48■□□□□ 0.39
PLXNB1-218ENST00000485535 PHLDB1Q86UU1 1377 aa17.47■□□□□ 0.39
PLXNB1-218ENST00000485535 MAPKBP1O60336 1514 aa17.47■□□□□ 0.39
PLXNB1-218ENST00000485535 LRRC9Q6ZRR7 1453 aa17.46■□□□□ 0.39
PLXNB1-218ENST00000485535 ANP32EQ9BTT0 268 aa17.45■□□□□ 0.38
PLXNB1-218ENST00000485535 CTTNBP2Q8WZ74 1663 aa17.43■□□□□ 0.38
PLXNB1-218ENST00000485535 TIMELESSQ9UNS1 1208 aa17.43■□□□□ 0.38
PLXNB1-218ENST00000485535 TONSLQ96HA7 1378 aa17.43■□□□□ 0.38
PLXNB1-218ENST00000485535 PPP1R15AO75807 674 aaPredicted RBP17.4■□□□□ 0.38
PLXNB1-218ENST00000485535 MAP3K1Q13233 1512 aa17.39■□□□□ 0.37
PLXNB1-218ENST00000485535 CCER2I3L3R5 266 aa17.38■□□□□ 0.37
PLXNB1-218ENST00000485535 CHD1O14646 1710 aa17.37■□□□□ 0.37
PLXNB1-218ENST00000485535 KIAA0586Q9BVV6 1533 aa17.36■□□□□ 0.37
PLXNB1-218ENST00000485535 FHOD3Q2V2M9 1422 aa17.35■□□□□ 0.37
PLXNB1-218ENST00000485535 NUP160Q12769 1436 aa17.35■□□□□ 0.37
PLXNB1-218ENST00000485535 CEP170Q5SW79 1584 aa17.35■□□□□ 0.37
PLXNB1-218ENST00000485535 IQGAP2Q13576 1575 aa17.34■□□□□ 0.37
PLXNB1-218ENST00000485535 MTUS2Q5JR59 1369 aa17.31■□□□□ 0.36
PLXNB1-218ENST00000485535 PCF11O94913 1555 aaKnown RBP17.3■□□□□ 0.36
PLXNB1-218ENST00000485535 HNRNPUQ00839 825 aaKnown RBP eCLIP17.29■□□□□ 0.36
PLXNB1-218ENST00000485535 RBM19Q9Y4C8 960 aaKnown RBP17.28■□□□□ 0.36
PLXNB1-218ENST00000485535 EFCAB5A4FU69 1503 aa17.28■□□□□ 0.36
PLXNB1-218ENST00000485535 JPH4Q96JJ6 628 aa17.27■□□□□ 0.36
PLXNB1-218ENST00000485535 UGGT2Q9NYU1 1516 aa17.25■□□□□ 0.35
PLXNB1-218ENST00000485535 FYCO1Q9BQS8 1478 aa17.23■□□□□ 0.35
PLXNB1-218ENST00000485535 SAMD9Q5K651 1589 aa17.23■□□□□ 0.35
PLXNB1-218ENST00000485535 CCDC18Q5T9S5 1454 aa17.22■□□□□ 0.35
PLXNB1-218ENST00000485535 IRX6P78412 446 aaPredicted RBP17.22■□□□□ 0.35
PLXNB1-218ENST00000485535 CASKIN1Q8WXD9 1431 aa17.22■□□□□ 0.35
PLXNB1-218ENST00000485535 CFAP43Q8NDM7 1665 aa17.22■□□□□ 0.35
PLXNB1-218ENST00000485535 ERICH6Q7L0X2 663 aa17.22■□□□□ 0.35
PLXNB1-218ENST00000485535 FGD6Q6ZV73 1430 aa17.21■□□□□ 0.35
PLXNB1-218ENST00000485535 OSCARQ8IYS5 282 aa17.21■□□□□ 0.35
PLXNB1-218ENST00000485535 FMN1Q68DA7 1419 aa17.2■□□□□ 0.34
PLXNB1-218ENST00000485535 CDK11AQ9UQ88 783 aaPredicted RBP17.2■□□□□ 0.34
PLXNB1-218ENST00000485535 CHIC2Q9UKJ5 165 aa17.19■□□□□ 0.34
PLXNB1-218ENST00000485535 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.19■□□□□ 0.34
PLXNB1-218ENST00000485535 CARMIL2Q6F5E8 1435 aa17.18■□□□□ 0.34
PLXNB1-218ENST00000485535 DISP1Q96F81 1524 aa17.18■□□□□ 0.34
PLXNB1-218ENST00000485535 RRP7BPQ9NSQ0 103 aa17.18■□□□□ 0.34
PLXNB1-218ENST00000485535 CLASP1Q7Z460 1538 aa17.16■□□□□ 0.34
PLXNB1-218ENST00000485535 UACAQ9BZF9 1416 aa17.16■□□□□ 0.34
PLXNB1-218ENST00000485535 PRG4Q92954 1404 aaPredicted RBP17.16■□□□□ 0.34
PLXNB1-218ENST00000485535 KIAA0556O60303 1618 aa17.15■□□□□ 0.34
PLXNB1-218ENST00000485535 HSPA5P11021 654 aaKnown RBP17.12■□□□□ 0.33
PLXNB1-218ENST00000485535 SHROOM2Q13796 1616 aa17.12■□□□□ 0.33
PLXNB1-218ENST00000485535 HFM1A2PYH4 1435 aa17.12■□□□□ 0.33
PLXNB1-218ENST00000485535 EIF4G2P78344 907 aaKnown RBP eCLIP17.12■□□□□ 0.33
PLXNB1-218ENST00000485535 FAM9BQ8IZU0 186 aa17.09■□□□□ 0.33
PLXNB1-218ENST00000485535 PTPRKQ15262 1439 aa17.08■□□□□ 0.33
PLXNB1-218ENST00000485535 MYOM3Q5VTT5 1437 aa17.07■□□□□ 0.32
PLXNB1-218ENST00000485535 NCOA2Q15596 1464 aa17.07■□□□□ 0.32
PLXNB1-218ENST00000485535 NAIPQ13075 1403 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms