RNA–Protein interactions for RNA: ENST00000484680.1

GTF3C2-211, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 3

Gene GTF3C2, Length 364 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-211ENST00000484680 GAPVD1Q14C86 1478 aa10.57□□□□□ -0.72
GTF3C2-211ENST00000484680 TDRD9Q8NDG6 1382 aaKnown RBP10.57□□□□□ -0.72
GTF3C2-211ENST00000484680 ABCA5Q8WWZ7 1642 aa10.57□□□□□ -0.72
GTF3C2-211ENST00000484680 IGF1RP08069 1367 aa10.56□□□□□ -0.72
GTF3C2-211ENST00000484680 LOC105371045A0A1W2PR82 267 aa10.56□□□□□ -0.72
GTF3C2-211ENST00000484680 KIF21BO75037 1637 aa10.55□□□□□ -0.72
GTF3C2-211ENST00000484680 ERICH3Q5RHP9 1530 aa10.54□□□□□ -0.72
GTF3C2-211ENST00000484680 GOLGA3Q08378 1498 aa10.54□□□□□ -0.72
GTF3C2-211ENST00000484680 PRXQ9BXM0 1461 aa10.54□□□□□ -0.72
GTF3C2-211ENST00000484680 AQRO60306 1485 aaKnown RBP eCLIP10.53□□□□□ -0.721e-6■■□□□ 13.7
GTF3C2-211ENST00000484680 ZNF608Q9ULD9 1512 aaPredicted RBP10.53□□□□□ -0.72
GTF3C2-211ENST00000484680 EHMT2Q96KQ7 1210 aa10.52□□□□□ -0.73
GTF3C2-211ENST00000484680 GRIN2BQ13224 1484 aa10.52□□□□□ -0.73
GTF3C2-211ENST00000484680 CUL7Q14999 1698 aa10.52□□□□□ -0.73
GTF3C2-211ENST00000484680 EIF4G3O43432 1585 aaKnown RBP10.52□□□□□ -0.73
GTF3C2-211ENST00000484680 CARMIL1Q5VZK9 1371 aa10.52□□□□□ -0.73
GTF3C2-211ENST00000484680 PBRM1Q86U86 1689 aa10.51□□□□□ -0.73
GTF3C2-211ENST00000484680 RAPGEF2Q9Y4G8 1499 aa10.5□□□□□ -0.73
GTF3C2-211ENST00000484680 UBTFP17480 764 aaKnown RBP10.5□□□□□ -0.73
GTF3C2-211ENST00000484680 POTEHQ6S545 545 aa10.5□□□□□ -0.73
GTF3C2-211ENST00000484680 APLP2Q06481 763 aa10.49□□□□□ -0.73
GTF3C2-211ENST00000484680 TNIKQ9UKE5 1360 aa10.47□□□□□ -0.73
GTF3C2-211ENST00000484680 FHAD1B1AJZ9 1412 aa10.46□□□□□ -0.74
GTF3C2-211ENST00000484680 ADAMTS12P58397 1594 aa10.45□□□□□ -0.74
GTF3C2-211ENST00000484680 MAGI1Q96QZ7 1491 aaPredicted RBP10.45□□□□□ -0.74
GTF3C2-211ENST00000484680 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.45□□□□□ -0.74
GTF3C2-211ENST00000484680 HNRNPUL2Q1KMD3 747 aaKnown RBP10.45□□□□□ -0.74
GTF3C2-211ENST00000484680 ZNF219Q9P2Y4 722 aaPredicted RBP10.45□□□□□ -0.74
GTF3C2-211ENST00000484680 SNAPC4Q5SXM2 1469 aa10.44□□□□□ -0.74
GTF3C2-211ENST00000484680 TRHP20396 242 aaPredicted RBP10.41□□□□□ -0.74
GTF3C2-211ENST00000484680 SYNJ2O15056 1496 aa10.41□□□□□ -0.74
GTF3C2-211ENST00000484680 CHMP7Q8WUX9 453 aaPredicted RBP10.4□□□□□ -0.74
GTF3C2-211ENST00000484680 CEP162Q5TB80 1403 aa10.39□□□□□ -0.75
GTF3C2-211ENST00000484680 GRIN2AQ12879 1464 aa10.38□□□□□ -0.75
GTF3C2-211ENST00000484680 FBLN2P98095 1184 aa10.37□□□□□ -0.75
GTF3C2-211ENST00000484680 SAMD1Q6SPF0 538 aaPredicted RBP10.37□□□□□ -0.75
GTF3C2-211ENST00000484680 CTTNBP2Q8WZ74 1663 aa10.37□□□□□ -0.75
GTF3C2-211ENST00000484680 CLIP1P30622 1438 aa10.35□□□□□ -0.75
GTF3C2-211ENST00000484680 ABCB7O75027 752 aa10.34□□□□□ -0.75
GTF3C2-211ENST00000484680 RANGAP1P46060 587 aaPredicted RBP10.34□□□□□ -0.75
GTF3C2-211ENST00000484680 KIAA0586Q9BVV6 1533 aa10.32□□□□□ -0.76
GTF3C2-211ENST00000484680 IQGAP2Q13576 1575 aa10.31□□□□□ -0.76
GTF3C2-211ENST00000484680 NUP160Q12769 1436 aa10.31□□□□□ -0.76
GTF3C2-211ENST00000484680 CHD1O14646 1710 aa10.3□□□□□ -0.76
GTF3C2-211ENST00000484680 CEP170Q5SW79 1584 aa10.3□□□□□ -0.76
GTF3C2-211ENST00000484680 EFCAB5A4FU69 1503 aa10.29□□□□□ -0.76
GTF3C2-211ENST00000484680 ARHGAP35Q9NRY4 1499 aa10.28□□□□□ -0.76
GTF3C2-211ENST00000484680 UGGT2Q9NYU1 1516 aa10.26□□□□□ -0.77
GTF3C2-211ENST00000484680 ARAP1Q96P48 1450 aa10.25□□□□□ -0.77
GTF3C2-211ENST00000484680 SAMD9Q5K651 1589 aa10.25□□□□□ -0.77
GTF3C2-211ENST00000484680 VPS8Q8N3P4 1428 aa10.24□□□□□ -0.77
GTF3C2-211ENST00000484680 JPH4Q96JJ6 628 aa10.23□□□□□ -0.77
GTF3C2-211ENST00000484680 P3H3Q8IVL6 736 aa10.22□□□□□ -0.77
GTF3C2-211ENST00000484680 FHOD3Q2V2M9 1422 aa10.22□□□□□ -0.77
GTF3C2-211ENST00000484680 CARMIL2Q6F5E8 1435 aa10.22□□□□□ -0.77
GTF3C2-211ENST00000484680 MYCNP04198 464 aaPredicted RBP10.21□□□□□ -0.77
GTF3C2-211ENST00000484680 FMN1Q68DA7 1419 aa10.21□□□□□ -0.78
GTF3C2-211ENST00000484680 KIAA0556O60303 1618 aa10.2□□□□□ -0.78
GTF3C2-211ENST00000484680 RBM42Q9BTD8 480 aaKnown RBP10.2□□□□□ -0.78
GTF3C2-211ENST00000484680 CLASP1Q7Z460 1538 aa10.19□□□□□ -0.78
GTF3C2-211ENST00000484680 DISP1Q96F81 1524 aa10.19□□□□□ -0.78
GTF3C2-211ENST00000484680 OSCARQ8IYS5 282 aa10.19□□□□□ -0.78
GTF3C2-211ENST00000484680 SHROOM2Q13796 1616 aa10.18□□□□□ -0.78
GTF3C2-211ENST00000484680 PRG4Q92954 1404 aaPredicted RBP10.17□□□□□ -0.78
GTF3C2-211ENST00000484680 FYCO1Q9BQS8 1478 aa10.15□□□□□ -0.78
GTF3C2-211ENST00000484680 CASKIN1Q8WXD9 1431 aa10.15□□□□□ -0.79
GTF3C2-211ENST00000484680 PCF11O94913 1555 aaKnown RBP10.14□□□□□ -0.79
GTF3C2-211ENST00000484680 POLA2Q14181 598 aa10.13□□□□□ -0.79
GTF3C2-211ENST00000484680 ATP1B4Q9UN42 357 aaPredicted RBP10.13□□□□□ -0.79
GTF3C2-211ENST00000484680 TTBK1Q5TCY1 1321 aaPredicted RBP10.11□□□□□ -0.79
GTF3C2-211ENST00000484680 MAP3K1Q13233 1512 aa10.11□□□□□ -0.79
GTF3C2-211ENST00000484680 HECW1Q76N89 1606 aa10.11□□□□□ -0.79
GTF3C2-211ENST00000484680 PTPRGP23470 1445 aa10.1□□□□□ -0.79
GTF3C2-211ENST00000484680 RAPGEF6Q8TEU7 1601 aa10.09□□□□□ -0.79
GTF3C2-211ENST00000484680 CCDC18Q5T9S5 1454 aa10.08□□□□□ -0.8
GTF3C2-211ENST00000484680 TIAM1Q13009 1591 aa10.08□□□□□ -0.8
GTF3C2-211ENST00000484680 ERCC6L2Q5T890 1561 aa10.08□□□□□ -0.8
GTF3C2-211ENST00000484680 CFAP43Q8NDM7 1665 aa10.07□□□□□ -0.8
GTF3C2-211ENST00000484680 PPARGC1BQ86YN6 1023 aaKnown RBP10.07□□□□□ -0.8
GTF3C2-211ENST00000484680 PLB1Q6P1J6 1458 aa10.06□□□□□ -0.8
GTF3C2-211ENST00000484680 ABCA8O94911 1581 aa10.05□□□□□ -0.8
GTF3C2-211ENST00000484680 EPRSP07814 1512 aaKnown RBP10.05□□□□□ -0.8
GTF3C2-211ENST00000484680 NUP153P49790 1475 aaKnown RBP10.04□□□□□ -0.8
GTF3C2-211ENST00000484680 UACAQ9BZF9 1416 aa10.04□□□□□ -0.8
GTF3C2-211ENST00000484680 LRRC9Q6ZRR7 1453 aa10.04□□□□□ -0.8
GTF3C2-211ENST00000484680 KANK4Q5T7N3 995 aaPredicted RBP10.03□□□□□ -0.8
GTF3C2-211ENST00000484680 CHRDL2Q6WN34 429 aa10.03□□□□□ -0.8
GTF3C2-211ENST00000484680 LRRIQ1Q96JM4 1722 aa10.03□□□□□ -0.8
GTF3C2-211ENST00000484680 CDK11AQ9UQ88 783 aaPredicted RBP10.03□□□□□ -0.8
GTF3C2-211ENST00000484680 MTUS2Q5JR59 1369 aa10.02□□□□□ -0.8
GTF3C2-211ENST00000484680 TRIM26Q12899 539 aaPredicted RBP10.02□□□□□ -0.81
GTF3C2-211ENST00000484680 ABCC2Q92887 1545 aa10.02□□□□□ -0.81
GTF3C2-211ENST00000484680 ARID3CA6NKF2 412 aa10.01□□□□□ -0.81
GTF3C2-211ENST00000484680 CDK13Q14004 1512 aaKnown RBP10.01□□□□□ -0.81
GTF3C2-211ENST00000484680 UHRF1BP1LA0JNW5 1464 aa10□□□□□ -0.81
GTF3C2-211ENST00000484680 ARHGEF11O15085 1522 aa10□□□□□ -0.81
GTF3C2-211ENST00000484680 EHBP1L1Q8N3D4 1523 aa10□□□□□ -0.81
GTF3C2-211ENST00000484680 FOXD4L1Q9NU39 408 aa9.99□□□□□ -0.81
GTF3C2-211ENST00000484680 ATP10BO94823 1461 aa9.98□□□□□ -0.81
GTF3C2-211ENST00000484680 SLC4A1APQ9BWU0 796 aaKnown RBP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms