RNA–Protein interactions for RNA: ENST00000484377.5

TMEM50B-209, Transcript of transmembrane protein 50B, humanhuman

TSL 2

Gene TMEM50B, Length 695 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-209ENST00000484377 POLA1P09884 1462 aaPredicted RBP15.71■□□□□ 0.11
TMEM50B-209ENST00000484377 WRNQ14191 1432 aaPredicted RBP eCLIP15.69■□□□□ 0.1
TMEM50B-209ENST00000484377 BIVM-ERCC5R4GMW8 1640 aa15.69■□□□□ 0.1
TMEM50B-209ENST00000484377 FBLN2P98095 1184 aa15.69■□□□□ 0.1
TMEM50B-209ENST00000484377 FGD5Q6ZNL6 1462 aa15.69■□□□□ 0.1
TMEM50B-209ENST00000484377 TOP2BQ02880 1626 aa15.68■□□□□ 0.1
TMEM50B-209ENST00000484377 TARBP1Q13395 1621 aaKnown RBP15.68■□□□□ 0.1
TMEM50B-209ENST00000484377 RAD54L2Q9Y4B4 1467 aa15.66■□□□□ 0.1
TMEM50B-209ENST00000484377 PROM2Q8N271 834 aa15.66■□□□□ 0.1
TMEM50B-209ENST00000484377 VSIG10Q8N0Z9 540 aa15.65■□□□□ 0.1
TMEM50B-209ENST00000484377 ZNF608Q9ULD9 1512 aaPredicted RBP15.64■□□□□ 0.09
TMEM50B-209ENST00000484377 IFNLR1Q8IU57 520 aaPredicted RBP15.64■□□□□ 0.09
TMEM50B-209ENST00000484377 IFT140Q96RY7 1462 aa15.63■□□□□ 0.09
TMEM50B-209ENST00000484377 WDR97A6NE52 1622 aa15.61■□□□□ 0.09
TMEM50B-209ENST00000484377 MKRN4PQ13434 485 aaPredicted RBP15.6■□□□□ 0.09
TMEM50B-209ENST00000484377 SOGA1O94964 1423 aa15.59■□□□□ 0.09
TMEM50B-209ENST00000484377 EIF4G3O43432 1585 aaKnown RBP15.56■□□□□ 0.08
TMEM50B-209ENST00000484377 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.54■□□□□ 0.08
TMEM50B-209ENST00000484377 TAOK2Q9UL54 1235 aa15.54■□□□□ 0.08
TMEM50B-209ENST00000484377 ABCA10Q8WWZ4 1543 aa15.53■□□□□ 0.08
TMEM50B-209ENST00000484377 AQRO60306 1485 aaKnown RBP eCLIP15.53■□□□□ 0.08
TMEM50B-209ENST00000484377 PRKCSHP14314 528 aaPredicted RBP15.53■□□□□ 0.08
TMEM50B-209ENST00000484377 PKD2Q13563 968 aa15.53■□□□□ 0.08
TMEM50B-209ENST00000484377 TDRD9Q8NDG6 1382 aaKnown RBP15.52■□□□□ 0.08
TMEM50B-209ENST00000484377 ABCA5Q8WWZ7 1642 aa15.5■□□□□ 0.07
TMEM50B-209ENST00000484377 PBRM1Q86U86 1689 aa15.43■□□□□ 0.06
TMEM50B-209ENST00000484377 GAPVD1Q14C86 1478 aa15.42■□□□□ 0.06
TMEM50B-209ENST00000484377 KLHL34Q8N239 644 aa15.42■□□□□ 0.06
TMEM50B-209ENST00000484377 BBXQ8WY36 941 aaPredicted RBP15.42■□□□□ 0.06
TMEM50B-209ENST00000484377 TRHP20396 242 aaPredicted RBP15.41■□□□□ 0.06
TMEM50B-209ENST00000484377 GRIN2BQ13224 1484 aa15.39■□□□□ 0.05
TMEM50B-209ENST00000484377 SNAPC4Q5SXM2 1469 aa15.39■□□□□ 0.05
TMEM50B-209ENST00000484377 RUSC2Q8N2Y8 1516 aa15.38■□□□□ 0.05
TMEM50B-209ENST00000484377 POLA2Q14181 598 aa15.37■□□□□ 0.05
TMEM50B-209ENST00000484377 SPOCK2Q92563 424 aa15.37■□□□□ 0.05
TMEM50B-209ENST00000484377 ECM2O94769 699 aaPredicted RBP15.36■□□□□ 0.05
TMEM50B-209ENST00000484377 PAXIP1Q6ZW49 1069 aaPredicted RBP15.36■□□□□ 0.05
TMEM50B-209ENST00000484377 TRIM41Q8WV44 630 aa15.36■□□□□ 0.05
TMEM50B-209ENST00000484377 CFAP44Q96MT7 982 aa15.34■□□□□ 0.05
TMEM50B-209ENST00000484377 CHD1O14646 1710 aa15.34■□□□□ 0.05
TMEM50B-209ENST00000484377 ADAMTS12P58397 1594 aa15.33■□□□□ 0.05
TMEM50B-209ENST00000484377 TPRNQ4KMQ1 711 aa15.33■□□□□ 0.04
TMEM50B-209ENST00000484377 MAGI1Q96QZ7 1491 aaPredicted RBP15.33■□□□□ 0.04
TMEM50B-209ENST00000484377 ERICH3Q5RHP9 1530 aa15.33■□□□□ 0.04
TMEM50B-209ENST00000484377 KIF27Q86VH2 1401 aa15.31■□□□□ 0.04
TMEM50B-209ENST00000484377 IGF1RP08069 1367 aa15.3■□□□□ 0.04
TMEM50B-209ENST00000484377 SYNJ2O15056 1496 aa15.27■□□□□ 0.04
TMEM50B-209ENST00000484377 KDM2AQ9Y2K7 1162 aa15.27■□□□□ 0.04
TMEM50B-209ENST00000484377 ZBTB12Q9Y330 459 aaPredicted RBP15.26■□□□□ 0.03
TMEM50B-209ENST00000484377 FHAD1B1AJZ9 1412 aa15.24■□□□□ 0.03
TMEM50B-209ENST00000484377 GRIN2AQ12879 1464 aa15.22■□□□□ 0.03
TMEM50B-209ENST00000484377 CAPN15O75808 1086 aa15.22■□□□□ 0.03
TMEM50B-209ENST00000484377 SPINK5Q9NQ38 1064 aaPredicted RBP15.22■□□□□ 0.03
TMEM50B-209ENST00000484377 CUL7Q14999 1698 aa15.21■□□□□ 0.03
TMEM50B-209ENST00000484377 CEP170Q5SW79 1584 aa15.19■□□□□ 0.02
TMEM50B-209ENST00000484377 CLASP1Q7Z460 1538 aa15.19■□□□□ 0.02
TMEM50B-209ENST00000484377 NPM1P06748 294 aaKnown RBP eCLIP15.19■□□□□ 0.02
TMEM50B-209ENST00000484377 SPRYD3Q8NCJ5 442 aa15.19■□□□□ 0.02
TMEM50B-209ENST00000484377 STAG3Q9UJ98 1225 aa15.18■□□□□ 0.02
TMEM50B-209ENST00000484377 PLCD3Q8N3E9 789 aa15.17■□□□□ 0.02
TMEM50B-209ENST00000484377 CHMP7Q8WUX9 453 aaPredicted RBP15.17■□□□□ 0.02
TMEM50B-209ENST00000484377 DNAJC5Q9H3Z4 198 aa15.17■□□□□ 0.02
TMEM50B-209ENST00000484377 NUP160Q12769 1436 aa15.17■□□□□ 0.02
TMEM50B-209ENST00000484377 CARMIL1Q5VZK9 1371 aa15.16■□□□□ 0.02
TMEM50B-209ENST00000484377 OSCARQ8IYS5 282 aa15.16■□□□□ 0.02
TMEM50B-209ENST00000484377 PRXQ9BXM0 1461 aa15.15■□□□□ 0.02
TMEM50B-209ENST00000484377 FAM9AQ8IZU1 332 aaPredicted RBP15.11■□□□□ 0.01
TMEM50B-209ENST00000484377 EEA1Q15075 1411 aa15.1■□□□□ 0.01
TMEM50B-209ENST00000484377 RAPGEF2Q9Y4G8 1499 aa15.09■□□□□ 0.01
TMEM50B-209ENST00000484377 RGL2O15211 777 aa15.09■□□□□ 0.01
TMEM50B-209ENST00000484377 TSHZ2Q9NRE2 1034 aa15.07■□□□□ 0
TMEM50B-209ENST00000484377 SHROOM2Q13796 1616 aa15.06■□□□□ 0
TMEM50B-209ENST00000484377 ZNF692Q9BU19 519 aaPredicted RBP15.05■□□□□ -0
TMEM50B-209ENST00000484377 ERCC6L2Q5T890 1561 aa15.05■□□□□ -0
TMEM50B-209ENST00000484377 MIER1Q8N108 512 aa15.04■□□□□ -0
TMEM50B-209ENST00000484377 RIMBP3CA6NJZ7 1639 aa15.03■□□□□ -0
TMEM50B-209ENST00000484377 RIMBP3BA6NNM3 1639 aa15.03■□□□□ -0
TMEM50B-209ENST00000484377 KIF21BO75037 1637 aa15.03■□□□□ -0
TMEM50B-209ENST00000484377 RIMBP3Q9UFD9 1639 aa15.03■□□□□ -0
TMEM50B-209ENST00000484377 ARHGEF11O15085 1522 aa15.03■□□□□ -0
TMEM50B-209ENST00000484377 KIAA0586Q9BVV6 1533 aa15.02□□□□□ -0.01
TMEM50B-209ENST00000484377 CHGAP10645 457 aaKnown RBP15.01□□□□□ -0.01
TMEM50B-209ENST00000484377 NBR1Q14596 966 aa15□□□□□ -0.01
TMEM50B-209ENST00000484377 CIZ1Q9ULV3 898 aaPredicted RBP14.99□□□□□ -0.01
TMEM50B-209ENST00000484377 CTTNBP2Q8WZ74 1663 aa14.98□□□□□ -0.01
TMEM50B-209ENST00000484377 ABCB7O75027 752 aa14.98□□□□□ -0.01
TMEM50B-209ENST00000484377 IQGAP2Q13576 1575 aa14.98□□□□□ -0.01
TMEM50B-209ENST00000484377 PLEKHG5O94827 1062 aa14.97□□□□□ -0.01
TMEM50B-209ENST00000484377 ARAP1Q96P48 1450 aa14.95□□□□□ -0.02
TMEM50B-209ENST00000484377 JPH4Q96JJ6 628 aa14.94□□□□□ -0.02
TMEM50B-209ENST00000484377 PRG4Q92954 1404 aaPredicted RBP14.93□□□□□ -0.02
TMEM50B-209ENST00000484377 UGGT2Q9NYU1 1516 aa14.92□□□□□ -0.02
TMEM50B-209ENST00000484377 ZBTB47Q9UFB7 747 aaPredicted RBP14.92□□□□□ -0.02
TMEM50B-209ENST00000484377 DISP1Q96F81 1524 aa14.92□□□□□ -0.02
TMEM50B-209ENST00000484377 GOLGA3Q08378 1498 aa14.91□□□□□ -0.02
TMEM50B-209ENST00000484377 RNF39Q9H2S5 420 aa14.91□□□□□ -0.02
TMEM50B-209ENST00000484377 SPDYE2BA6NHP3 402 aa14.88□□□□□ -0.03
TMEM50B-209ENST00000484377 SPDYE6P0CI01 402 aa14.88□□□□□ -0.03
TMEM50B-209ENST00000484377 SPDYE2Q495Y8 402 aa14.88□□□□□ -0.03
TMEM50B-209ENST00000484377 C1QBPQ07021 282 aaKnown RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 316.3 ms