RNA–Protein interactions for RNA: ENST00000483728.5

SP140L-208, Transcript of SP140 nuclear body protein like, humanhuman

TSL 2

Gene SP140L, Length 3,070 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140L-208ENST00000483728 KIF21AQ7Z4S6 1674 aa12.55□□□□□ -0.4
SP140L-208ENST00000483728 UBTFP17480 764 aaKnown RBP12.54□□□□□ -0.4
SP140L-208ENST00000483728 NEUROD1Q13562 356 aa12.53□□□□□ -0.4
SP140L-208ENST00000483728 EIF5BO60841 1220 aaKnown RBP12.52□□□□□ -0.4
SP140L-208ENST00000483728 ZEB1P37275 1124 aaPredicted RBP12.51□□□□□ -0.41
SP140L-208ENST00000483728 ERICH3Q5RHP9 1530 aa12.5□□□□□ -0.41
SP140L-208ENST00000483728 PCGF6Q9BYE7 350 aa12.5□□□□□ -0.41
SP140L-208ENST00000483728 ABCA5Q8WWZ7 1642 aa12.47□□□□□ -0.41
SP140L-208ENST00000483728 TARBP1Q13395 1621 aaKnown RBP12.44□□□□□ -0.42
SP140L-208ENST00000483728 THOC2Q8NI27 1593 aaKnown RBP12.44□□□□□ -0.42
SP140L-208ENST00000483728 WDR62O43379 1518 aa12.43□□□□□ -0.42
SP140L-208ENST00000483728 FANCD2Q9BXW9 1451 aa12.43□□□□□ -0.42
SP140L-208ENST00000483728 UBE2Q2Q8WVN8 375 aa12.42□□□□□ -0.42
SP140L-208ENST00000483728 CUL7Q14999 1698 aa12.41□□□□□ -0.42
SP140L-208ENST00000483728 ABCA10Q8WWZ4 1543 aa12.41□□□□□ -0.42
SP140L-208ENST00000483728 TOPBP1Q92547 1522 aa12.4□□□□□ -0.42
SP140L-208ENST00000483728 PRXQ9BXM0 1461 aa12.38□□□□□ -0.43
SP140L-208ENST00000483728 URB2Q14146 1524 aaKnown RBP12.38□□□□□ -0.43
SP140L-208ENST00000483728 TSHZ2Q9NRE2 1034 aa12.37□□□□□ -0.43
SP140L-208ENST00000483728 CEP164Q9UPV0 1460 aa12.37□□□□□ -0.43
SP140L-208ENST00000483728 PAXIP1Q6ZW49 1069 aaPredicted RBP12.37□□□□□ -0.43
SP140L-208ENST00000483728 CFAP44Q96MT7 982 aa12.36□□□□□ -0.43
SP140L-208ENST00000483728 PBRM1Q86U86 1689 aa12.35□□□□□ -0.43
SP140L-208ENST00000483728 NESP48681 1621 aa12.34□□□□□ -0.43
SP140L-208ENST00000483728 NPM1P06748 294 aaKnown RBP eCLIP12.34□□□□□ -0.43
SP140L-208ENST00000483728 FGD5Q6ZNL6 1462 aa12.33□□□□□ -0.44
SP140L-208ENST00000483728 SOGA1O94964 1423 aa12.33□□□□□ -0.44
SP140L-208ENST00000483728 PDS5BQ9NTI5 1447 aa12.32□□□□□ -0.44
SP140L-208ENST00000483728 CTTNBP2Q8WZ74 1663 aa12.32□□□□□ -0.44
SP140L-208ENST00000483728 POLA1P09884 1462 aaPredicted RBP12.31□□□□□ -0.44
SP140L-208ENST00000483728 RUSC2Q8N2Y8 1516 aa12.31□□□□□ -0.44
SP140L-208ENST00000483728 LOC105371045A0A1W2PR82 267 aa12.31□□□□□ -0.44
SP140L-208ENST00000483728 GOLGA3Q08378 1498 aa12.3□□□□□ -0.44
SP140L-208ENST00000483728 TRIM41Q8WV44 630 aa12.3□□□□□ -0.44
SP140L-208ENST00000483728 MRC2Q9UBG0 1479 aa12.3□□□□□ -0.44
SP140L-208ENST00000483728 PKD2Q13563 968 aa12.29□□□□□ -0.44
SP140L-208ENST00000483728 TNIKQ9UKE5 1360 aa12.27□□□□□ -0.44
SP140L-208ENST00000483728 KIF27Q86VH2 1401 aa12.23□□□□□ -0.45
SP140L-208ENST00000483728 TRHP20396 242 aaPredicted RBP12.22□□□□□ -0.45
SP140L-208ENST00000483728 CUX2O14529 1486 aa12.21□□□□□ -0.45
SP140L-208ENST00000483728 ADAMTS12P58397 1594 aa12.21□□□□□ -0.45
SP140L-208ENST00000483728 ANO8Q9HCE9 1232 aaPredicted RBP12.2□□□□□ -0.46
SP140L-208ENST00000483728 FOXD1Q16676 465 aa12.19□□□□□ -0.46
SP140L-208ENST00000483728 SAMD9Q5K651 1589 aa12.18□□□□□ -0.46
SP140L-208ENST00000483728 NBR1Q14596 966 aa12.18□□□□□ -0.46
SP140L-208ENST00000483728 FBXO3Q9UK99 471 aa12.17□□□□□ -0.46
SP140L-208ENST00000483728 IFT140Q96RY7 1462 aa12.16□□□□□ -0.46
SP140L-208ENST00000483728 PLEKHG5O94827 1062 aa12.16□□□□□ -0.46
SP140L-208ENST00000483728 RAPGEF2Q9Y4G8 1499 aa12.16□□□□□ -0.46
SP140L-208ENST00000483728 EIF4G3O43432 1585 aaKnown RBP12.14□□□□□ -0.47
SP140L-208ENST00000483728 EFCAB5A4FU69 1503 aa12.14□□□□□ -0.47
SP140L-208ENST00000483728 MAP3K1Q13233 1512 aa12.13□□□□□ -0.47
SP140L-208ENST00000483728 IGF1RP08069 1367 aa12.12□□□□□ -0.47
SP140L-208ENST00000483728 CFAP43Q8NDM7 1665 aa12.12□□□□□ -0.47
SP140L-208ENST00000483728 CEP162Q5TB80 1403 aa12.11□□□□□ -0.47
SP140L-208ENST00000483728 IFNLR1Q8IU57 520 aaPredicted RBP12.1□□□□□ -0.47
SP140L-208ENST00000483728 DNAJC5BQ9UF47 199 aa12.1□□□□□ -0.47
SP140L-208ENST00000483728 RAD54L2Q9Y4B4 1467 aa12.09□□□□□ -0.47
SP140L-208ENST00000483728 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.07□□□□□ -0.48
SP140L-208ENST00000483728 BBXQ8WY36 941 aaPredicted RBP12.07□□□□□ -0.48
SP140L-208ENST00000483728 ARAP1Q96P48 1450 aa12.07□□□□□ -0.48
SP140L-208ENST00000483728 GAPVD1Q14C86 1478 aa12.06□□□□□ -0.48
SP140L-208ENST00000483728 AQRO60306 1485 aaKnown RBP eCLIP12.05□□□□□ -0.48
SP140L-208ENST00000483728 ERICH6BQ5W0A0 696 aa12.05□□□□□ -0.48
SP140L-208ENST00000483728 LRRIQ1Q96JM4 1722 aa12.04□□□□□ -0.48
SP140L-208ENST00000483728 PKNOX2Q96KN3 472 aa12.03□□□□□ -0.48
SP140L-208ENST00000483728 MAGI1Q96QZ7 1491 aaPredicted RBP12.03□□□□□ -0.48
SP140L-208ENST00000483728 CNKSR2Q8WXI2 1034 aa12.03□□□□□ -0.48
SP140L-208ENST00000483728 CLSPNQ9HAW4 1339 aa12.03□□□□□ -0.48
SP140L-208ENST00000483728 GRIN2BQ13224 1484 aa12.02□□□□□ -0.49
SP140L-208ENST00000483728 UGGT2Q9NYU1 1516 aa12.01□□□□□ -0.49
SP140L-208ENST00000483728 SLC4A2P04920 1241 aa12.01□□□□□ -0.49
SP140L-208ENST00000483728 SHROOM2Q13796 1616 aa12□□□□□ -0.49
SP140L-208ENST00000483728 ARHGAP35Q9NRY4 1499 aa12□□□□□ -0.49
SP140L-208ENST00000483728 VPS8Q8N3P4 1428 aa12□□□□□ -0.49
SP140L-208ENST00000483728 FHAD1B1AJZ9 1412 aa11.99□□□□□ -0.49
SP140L-208ENST00000483728 MYT1LQ9UL68 1186 aa11.97□□□□□ -0.49
SP140L-208ENST00000483728 ARID3AQ99856 593 aa11.97□□□□□ -0.49
SP140L-208ENST00000483728 CARMIL1Q5VZK9 1371 aa11.97□□□□□ -0.49
SP140L-208ENST00000483728 IQGAP2Q13576 1575 aa11.96□□□□□ -0.5
SP140L-208ENST00000483728 CLIP1P30622 1438 aa11.94□□□□□ -0.5
SP140L-208ENST00000483728 SNAPC4Q5SXM2 1469 aa11.94□□□□□ -0.5
SP140L-208ENST00000483728 IGSF3O75054 1194 aa11.93□□□□□ -0.5
SP140L-208ENST00000483728 SALL2Q9Y467 1007 aaPredicted RBP11.93□□□□□ -0.5
SP140L-208ENST00000483728 CEP170Q5SW79 1584 aa11.93□□□□□ -0.5
SP140L-208ENST00000483728 VASPP50552 380 aaPredicted RBP11.92□□□□□ -0.5
SP140L-208ENST00000483728 NUP160Q12769 1436 aa11.92□□□□□ -0.5
SP140L-208ENST00000483728 ZNF608Q9ULD9 1512 aaPredicted RBP11.92□□□□□ -0.5
SP140L-208ENST00000483728 TIAM1Q13009 1591 aa11.92□□□□□ -0.5
SP140L-208ENST00000483728 FYCO1Q9BQS8 1478 aa11.91□□□□□ -0.5
SP140L-208ENST00000483728 PCF11O94913 1555 aaKnown RBP11.91□□□□□ -0.5
SP140L-208ENST00000483728 DNAJC5Q9H3Z4 198 aa11.91□□□□□ -0.5
SP140L-208ENST00000483728 CHD1O14646 1710 aa11.91□□□□□ -0.5
SP140L-208ENST00000483728 KIAA0556O60303 1618 aa11.91□□□□□ -0.5
SP140L-208ENST00000483728 SYNJ2O15056 1496 aa11.91□□□□□ -0.5
SP140L-208ENST00000483728 BRPF1P55201 1214 aaPredicted RBP11.9□□□□□ -0.5
SP140L-208ENST00000483728 SPRYD3Q8NCJ5 442 aa11.9□□□□□ -0.5
SP140L-208ENST00000483728 GRIN2AQ12879 1464 aa11.9□□□□□ -0.5
SP140L-208ENST00000483728 ERCC6Q03468 1493 aa11.88□□□□□ -0.51
SP140L-208ENST00000483728 ARHGEF11O15085 1522 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms