RNA–Protein interactions for RNA: ENST00000483564.5

GABRE-208, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 3

Gene GABRE, Length 2,747 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-208ENST00000483564 ERICH6BQ5W0A0 696 aa12.98□□□□□ -0.33
GABRE-208ENST00000483564 IL27Q8NEV9 243 aa12.98□□□□□ -0.33
GABRE-208ENST00000483564 FANCIQ9NVI1 1328 aa12.98□□□□□ -0.33
GABRE-208ENST00000483564 EIF5BO60841 1220 aaKnown RBP12.97□□□□□ -0.33
GABRE-208ENST00000483564 KANK4Q5T7N3 995 aaPredicted RBP12.97□□□□□ -0.33
GABRE-208ENST00000483564 CADPSQ9ULU8 1353 aa12.96□□□□□ -0.33
GABRE-208ENST00000483564 CDK11AQ9UQ88 783 aaPredicted RBP12.92□□□□□ -0.34
GABRE-208ENST00000483564 PPP1R15AO75807 674 aaPredicted RBP12.91□□□□□ -0.34
GABRE-208ENST00000483564 CEP164Q9UPV0 1460 aa12.9□□□□□ -0.34
GABRE-208ENST00000483564 SYNJ1O43426 1573 aa12.9□□□□□ -0.34
GABRE-208ENST00000483564 SIN3AQ96ST3 1273 aa12.9□□□□□ -0.35
GABRE-208ENST00000483564 TOP2BQ02880 1626 aa12.89□□□□□ -0.35
GABRE-208ENST00000483564 PKNOX2Q96KN3 472 aa12.89□□□□□ -0.35
GABRE-208ENST00000483564 BIVM-ERCC5R4GMW8 1640 aa12.88□□□□□ -0.35
GABRE-208ENST00000483564 RAPGEF2Q9Y4G8 1499 aa12.87□□□□□ -0.35
GABRE-208ENST00000483564 KIF21BO75037 1637 aa12.87□□□□□ -0.35
GABRE-208ENST00000483564 LAMC3Q9Y6N6 1575 aa12.87□□□□□ -0.35
GABRE-208ENST00000483564 ANP32CO43423 234 aa12.85□□□□□ -0.35
GABRE-208ENST00000483564 PLEKHG5O94827 1062 aa12.84□□□□□ -0.35
GABRE-208ENST00000483564 CCER2I3L3R5 266 aa12.83□□□□□ -0.35
GABRE-208ENST00000483564 PAK3O75914 559 aaPredicted RBP12.82□□□□□ -0.36
GABRE-208ENST00000483564 HNRNPUQ00839 825 aaKnown RBP eCLIP12.81□□□□□ -0.36
GABRE-208ENST00000483564 FANCD2Q9BXW9 1451 aa12.8□□□□□ -0.36
GABRE-208ENST00000483564 CUX1P39880 1505 aa12.8□□□□□ -0.36
GABRE-208ENST00000483564 RAB3GAP2Q9H2M9 1393 aa12.8□□□□□ -0.36
GABRE-208ENST00000483564 WDR97A6NE52 1622 aa12.8□□□□□ -0.36
GABRE-208ENST00000483564 MAPKBP1O60336 1514 aa12.78□□□□□ -0.36
GABRE-208ENST00000483564 B4GALNT3Q6L9W6 998 aa12.78□□□□□ -0.36
GABRE-208ENST00000483564 RRBP1Q9P2E9 1410 aaKnown RBP12.77□□□□□ -0.36
GABRE-208ENST00000483564 NOP58Q9Y2X3 529 aaKnown RBP12.77□□□□□ -0.37
GABRE-208ENST00000483564 CCNB3Q8WWL7 1395 aa12.77□□□□□ -0.37
GABRE-208ENST00000483564 NESP48681 1621 aa12.77□□□□□ -0.37
GABRE-208ENST00000483564 PDS5BQ9NTI5 1447 aa12.76□□□□□ -0.37
GABRE-208ENST00000483564 SLC24A1O60721 1099 aa12.76□□□□□ -0.37
GABRE-208ENST00000483564 RTL5Q5HYW3 569 aaPredicted RBP12.75□□□□□ -0.37
GABRE-208ENST00000483564 DNAJC5BQ9UF47 199 aa12.75□□□□□ -0.37
GABRE-208ENST00000483564 CUX2O14529 1486 aa12.74□□□□□ -0.37
GABRE-208ENST00000483564 PPP4R2Q9NY27 417 aa12.73□□□□□ -0.37
GABRE-208ENST00000483564 DNMBPQ6XZF7 1577 aa12.72□□□□□ -0.37
GABRE-208ENST00000483564 ARAP1Q96P48 1450 aa12.72□□□□□ -0.37
GABRE-208ENST00000483564 PODXL2Q9NZ53 605 aa12.69□□□□□ -0.38
GABRE-208ENST00000483564 TIMELESSQ9UNS1 1208 aa12.68□□□□□ -0.38
GABRE-208ENST00000483564 TOPBP1Q92547 1522 aa12.67□□□□□ -0.38
GABRE-208ENST00000483564 KIF27Q86VH2 1401 aa12.67□□□□□ -0.38
GABRE-208ENST00000483564 FGD5Q6ZNL6 1462 aa12.67□□□□□ -0.38
GABRE-208ENST00000483564 CCDC184Q52MB2 194 aa12.67□□□□□ -0.38
GABRE-208ENST00000483564 KIF21AQ7Z4S6 1674 aa12.66□□□□□ -0.38
GABRE-208ENST00000483564 SETD5Q9C0A6 1442 aa12.65□□□□□ -0.38
GABRE-208ENST00000483564 FAM50AQ14320 339 aaKnown RBP12.64□□□□□ -0.39
GABRE-208ENST00000483564 URB2Q14146 1524 aaKnown RBP12.62□□□□□ -0.39
GABRE-208ENST00000483564 FAM9BQ8IZU0 186 aa12.6□□□□□ -0.39
GABRE-208ENST00000483564 POLA1P09884 1462 aaPredicted RBP12.6□□□□□ -0.39
GABRE-208ENST00000483564 IPO9Q96P70 1041 aaKnown RBP12.59□□□□□ -0.39
GABRE-208ENST00000483564 BRPF3Q9ULD4 1205 aa12.59□□□□□ -0.39
GABRE-208ENST00000483564 ERICH3Q5RHP9 1530 aa12.59□□□□□ -0.39
GABRE-208ENST00000483564 ABCA10Q8WWZ4 1543 aa12.58□□□□□ -0.39
GABRE-208ENST00000483564 ZBTB47Q9UFB7 747 aaPredicted RBP12.58□□□□□ -0.4
GABRE-208ENST00000483564 PRXQ9BXM0 1461 aa12.57□□□□□ -0.4
GABRE-208ENST00000483564 MRC2Q9UBG0 1479 aa12.57□□□□□ -0.4
GABRE-208ENST00000483564 ZMYND15Q9H091 742 aa12.56□□□□□ -0.4
GABRE-208ENST00000483564 ANP32AP39687 249 aaKnown RBP12.55□□□□□ -0.4
GABRE-208ENST00000483564 VSIG10Q8N0Z9 540 aa12.55□□□□□ -0.4
GABRE-208ENST00000483564 DAXXQ9UER7 740 aaPredicted RBP12.54□□□□□ -0.4
GABRE-208ENST00000483564 PHLDB1Q86UU1 1377 aa12.54□□□□□ -0.4
GABRE-208ENST00000483564 SENP3-EIF4A1A0A087X0R7 540 aa12.53□□□□□ -0.4
GABRE-208ENST00000483564 WASHC2AQ641Q2 1341 aa12.53□□□□□ -0.4
GABRE-208ENST00000483564 TONSLQ96HA7 1378 aa12.53□□□□□ -0.4
GABRE-208ENST00000483564 RAD54L2Q9Y4B4 1467 aa12.53□□□□□ -0.4
GABRE-208ENST00000483564 IGF1RP08069 1367 aa12.53□□□□□ -0.4
GABRE-208ENST00000483564 LAS1LQ9Y4W2 734 aaKnown RBP12.52□□□□□ -0.41
GABRE-208ENST00000483564 ARHGAP35Q9NRY4 1499 aa12.51□□□□□ -0.41
GABRE-208ENST00000483564 WDR62O43379 1518 aa12.51□□□□□ -0.41
GABRE-208ENST00000483564 NPM2Q86SE8 214 aaKnown RBP12.51□□□□□ -0.41
GABRE-208ENST00000483564 NEFMP07197 916 aa12.5□□□□□ -0.41
GABRE-208ENST00000483564 ERCC6Q03468 1493 aa12.5□□□□□ -0.41
GABRE-208ENST00000483564 MRS2Q9HD23 443 aa12.49□□□□□ -0.41
GABRE-208ENST00000483564 ATP1B4Q9UN42 357 aaPredicted RBP12.49□□□□□ -0.41
GABRE-208ENST00000483564 HSPA5P11021 654 aaKnown RBP12.49□□□□□ -0.41
GABRE-208ENST00000483564 GLIPR1L2Q4G1C9 344 aa12.49□□□□□ -0.41
GABRE-208ENST00000483564 C11orf95C9JLR9 678 aaPredicted RBP12.48□□□□□ -0.41
GABRE-208ENST00000483564 TARBP1Q13395 1621 aaKnown RBP12.48□□□□□ -0.41
GABRE-208ENST00000483564 CUL7Q14999 1698 aa12.48□□□□□ -0.41
GABRE-208ENST00000483564 ABCA5Q8WWZ7 1642 aa12.47□□□□□ -0.41
GABRE-208ENST00000483564 CNGB1Q14028 1251 aaPredicted RBP12.47□□□□□ -0.41
GABRE-208ENST00000483564 CARMIL1Q5VZK9 1371 aa12.47□□□□□ -0.41
GABRE-208ENST00000483564 AKNAQ7Z591 1439 aa12.47□□□□□ -0.41
GABRE-208ENST00000483564 ZBED9Q6R2W3 1325 aa12.46□□□□□ -0.41
GABRE-208ENST00000483564 RSPH6AQ9H0K4 717 aa12.46□□□□□ -0.42
GABRE-208ENST00000483564 PRKRIP1Q9H875 184 aaPredicted RBP12.46□□□□□ -0.42
GABRE-208ENST00000483564 THOC2Q8NI27 1593 aaKnown RBP12.45□□□□□ -0.42
GABRE-208ENST00000483564 P3H3Q8IVL6 736 aa12.45□□□□□ -0.42
GABRE-208ENST00000483564 WASHC2CQ9Y4E1 1318 aa12.44□□□□□ -0.42
GABRE-208ENST00000483564 GAPVD1Q14C86 1478 aa12.44□□□□□ -0.42
GABRE-208ENST00000483564 IFT140Q96RY7 1462 aa12.44□□□□□ -0.42
GABRE-208ENST00000483564 LRRC9Q6ZRR7 1453 aa12.42□□□□□ -0.42
GABRE-208ENST00000483564 TDRD9Q8NDG6 1382 aaKnown RBP12.41□□□□□ -0.42
GABRE-208ENST00000483564 A0A0U1RQG5 324 aaPredicted RBP12.39□□□□□ -0.43
GABRE-208ENST00000483564 TIAM1Q13009 1591 aa12.39□□□□□ -0.43
GABRE-208ENST00000483564 PBRM1Q86U86 1689 aa12.38□□□□□ -0.43
GABRE-208ENST00000483564 FHAD1B1AJZ9 1412 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms