RNA–Protein interactions for RNA: ENST00000482843.5

RAPGEF3-210, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 3,395 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-210ENST00000482843 BIVM-ERCC5R4GMW8 1640 aa17.5■□□□□ 0.39
RAPGEF3-210ENST00000482843 MIER1Q8N108 512 aa17.47■□□□□ 0.39
RAPGEF3-210ENST00000482843 ERICH3Q5RHP9 1530 aa17.46■□□□□ 0.39
RAPGEF3-210ENST00000482843 ARHGAP35Q9NRY4 1499 aa17.45■□□□□ 0.38
RAPGEF3-210ENST00000482843 ACIN1Q9UKV3 1341 aaKnown RBP17.45■□□□□ 0.38
RAPGEF3-210ENST00000482843 CCNB3Q8WWL7 1395 aa17.44■□□□□ 0.38
RAPGEF3-210ENST00000482843 GTF3C3Q9Y5Q9 886 aa17.42■□□□□ 0.38
RAPGEF3-210ENST00000482843 FHOD3Q2V2M9 1422 aa17.4■□□□□ 0.38
RAPGEF3-210ENST00000482843 FBLN2P98095 1184 aa17.35■□□□□ 0.37
RAPGEF3-210ENST00000482843 PLPPR3Q6T4P5 718 aa17.34■□□□□ 0.37
RAPGEF3-210ENST00000482843 DHX57Q6P158 1386 aaKnown RBP17.34■□□□□ 0.37
RAPGEF3-210ENST00000482843 POLA1P09884 1462 aaPredicted RBP17.33■□□□□ 0.36
RAPGEF3-210ENST00000482843 SIN3AQ96ST3 1273 aa17.32■□□□□ 0.36
RAPGEF3-210ENST00000482843 TOPBP1Q92547 1522 aa17.31■□□□□ 0.36
RAPGEF3-210ENST00000482843 MTUS2Q5JR59 1369 aa17.3■□□□□ 0.36
RAPGEF3-210ENST00000482843 HIRIP3Q9BW71 556 aaPredicted RBP17.3■□□□□ 0.36
RAPGEF3-210ENST00000482843 CHIC2Q9UKJ5 165 aa17.29■□□□□ 0.36
RAPGEF3-210ENST00000482843 RAB3GAP2Q9H2M9 1393 aa17.28■□□□□ 0.36
RAPGEF3-210ENST00000482843 FHAD1B1AJZ9 1412 aa17.28■□□□□ 0.36
RAPGEF3-210ENST00000482843 PDS5BQ9NTI5 1447 aa17.27■□□□□ 0.36
RAPGEF3-210ENST00000482843 PHLDB1Q86UU1 1377 aa17.27■□□□□ 0.36
RAPGEF3-210ENST00000482843 PODXL2Q9NZ53 605 aa17.25■□□□□ 0.35
RAPGEF3-210ENST00000482843 TRIM52Q96A61 297 aa17.22■□□□□ 0.35
RAPGEF3-210ENST00000482843 RRBP1Q9P2E9 1410 aaKnown RBP17.21■□□□□ 0.35
RAPGEF3-210ENST00000482843 DNMBPQ6XZF7 1577 aa17.2■□□□□ 0.34
RAPGEF3-210ENST00000482843 RRP7BPQ9NSQ0 103 aa17.2■□□□□ 0.34
RAPGEF3-210ENST00000482843 LRRC9Q6ZRR7 1453 aa17.19■□□□□ 0.34
RAPGEF3-210ENST00000482843 URB2Q14146 1524 aaKnown RBP17.19■□□□□ 0.34
RAPGEF3-210ENST00000482843 CLSPNQ9HAW4 1339 aa17.18■□□□□ 0.34
RAPGEF3-210ENST00000482843 GAPVD1Q14C86 1478 aa17.18■□□□□ 0.34
RAPGEF3-210ENST00000482843 ABCA10Q8WWZ4 1543 aa17.17■□□□□ 0.34
RAPGEF3-210ENST00000482843 SETD5Q9C0A6 1442 aa17.17■□□□□ 0.34
RAPGEF3-210ENST00000482843 DDX10Q13206 875 aaKnown RBP17.16■□□□□ 0.34
RAPGEF3-210ENST00000482843 AQRO60306 1485 aaKnown RBP eCLIP17.16■□□□□ 0.34
RAPGEF3-210ENST00000482843 TIAM1Q13009 1591 aa17.13■□□□□ 0.33
RAPGEF3-210ENST00000482843 AEBP2Q6ZN18 517 aaPredicted RBP17.12■□□□□ 0.33
RAPGEF3-210ENST00000482843 KLHL34Q8N239 644 aa17.12■□□□□ 0.33
RAPGEF3-210ENST00000482843 FMN1Q68DA7 1419 aa17.11■□□□□ 0.33
RAPGEF3-210ENST00000482843 CHMP7Q8WUX9 453 aaPredicted RBP17.09■□□□□ 0.33
RAPGEF3-210ENST00000482843 ZNF777Q9ULD5 760 aaPredicted RBP17.09■□□□□ 0.33
RAPGEF3-210ENST00000482843 RTN4Q9NQC3 1192 aaKnown RBP17.09■□□□□ 0.33
RAPGEF3-210ENST00000482843 PCF11O94913 1555 aaKnown RBP17.09■□□□□ 0.33
RAPGEF3-210ENST00000482843 PRDM2Q13029 1718 aa17.06■□□□□ 0.32
RAPGEF3-210ENST00000482843 NCBP3Q53F19 620 aaKnown RBP17.05■□□□□ 0.32
RAPGEF3-210ENST00000482843 LAMC3Q9Y6N6 1575 aa17.05■□□□□ 0.32
RAPGEF3-210ENST00000482843 CASKIN1Q8WXD9 1431 aa17.05■□□□□ 0.32
RAPGEF3-210ENST00000482843 TONSLQ96HA7 1378 aa17.05■□□□□ 0.32
RAPGEF3-210ENST00000482843 ANO8Q9HCE9 1232 aaPredicted RBP17.04■□□□□ 0.32
RAPGEF3-210ENST00000482843 CNGB1Q14028 1251 aaPredicted RBP17.03■□□□□ 0.32
RAPGEF3-210ENST00000482843 ERCC6Q03468 1493 aa17.02■□□□□ 0.32
RAPGEF3-210ENST00000482843 KCNH8Q96L42 1107 aa17.01■□□□□ 0.31
RAPGEF3-210ENST00000482843 FOXD1Q16676 465 aa17■□□□□ 0.31
RAPGEF3-210ENST00000482843 FYCO1Q9BQS8 1478 aa16.99■□□□□ 0.31
RAPGEF3-210ENST00000482843 FGD6Q6ZV73 1430 aa16.98■□□□□ 0.31
RAPGEF3-210ENST00000482843 EFCAB5A4FU69 1503 aa16.94■□□□□ 0.3
RAPGEF3-210ENST00000482843 POLR3GLQ9BT43 218 aa16.94■□□□□ 0.3
RAPGEF3-210ENST00000482843 CDK11AQ9UQ88 783 aaPredicted RBP16.94■□□□□ 0.3
RAPGEF3-210ENST00000482843 ZNF326Q5BKZ1 582 aaKnown RBP16.93■□□□□ 0.3
RAPGEF3-210ENST00000482843 CUL7Q14999 1698 aa16.93■□□□□ 0.3
RAPGEF3-210ENST00000482843 NCOA2Q15596 1464 aa16.93■□□□□ 0.3
RAPGEF3-210ENST00000482843 PPP1R15AO75807 674 aaPredicted RBP16.92■□□□□ 0.3
RAPGEF3-210ENST00000482843 ZNF608Q9ULD9 1512 aaPredicted RBP16.92■□□□□ 0.3
RAPGEF3-210ENST00000482843 MAP3K1Q13233 1512 aa16.91■□□□□ 0.3
RAPGEF3-210ENST00000482843 ZNF644Q9H582 1327 aaPredicted RBP16.91■□□□□ 0.3
RAPGEF3-210ENST00000482843 KIF21AQ7Z4S6 1674 aa16.91■□□□□ 0.3
RAPGEF3-210ENST00000482843 ANP32CO43423 234 aa16.9■□□□□ 0.3
RAPGEF3-210ENST00000482843 TIMELESSQ9UNS1 1208 aa16.9■□□□□ 0.3
RAPGEF3-210ENST00000482843 BCANQ96GW7 911 aa16.89■□□□□ 0.29
RAPGEF3-210ENST00000482843 MRC2Q9UBG0 1479 aa16.88■□□□□ 0.29
RAPGEF3-210ENST00000482843 MYOM3Q5VTT5 1437 aa16.88■□□□□ 0.29
RAPGEF3-210ENST00000482843 CCDC18Q5T9S5 1454 aa16.88■□□□□ 0.29
RAPGEF3-210ENST00000482843 MAPKBP1O60336 1514 aa16.87■□□□□ 0.29
RAPGEF3-210ENST00000482843 CFDP1Q9UEE9 299 aaPredicted RBP16.87■□□□□ 0.29
RAPGEF3-210ENST00000482843 PTPRKQ15262 1439 aa16.87■□□□□ 0.29
RAPGEF3-210ENST00000482843 GRIN2BQ13224 1484 aa16.86■□□□□ 0.29
RAPGEF3-210ENST00000482843 SLC4A1APQ9BWU0 796 aaKnown RBP16.85■□□□□ 0.29
RAPGEF3-210ENST00000482843 CDK13Q14004 1512 aaKnown RBP16.84■□□□□ 0.29
RAPGEF3-210ENST00000482843 SNAPC4Q5SXM2 1469 aa16.84■□□□□ 0.29
RAPGEF3-210ENST00000482843 WDR97A6NE52 1622 aa16.83■□□□□ 0.29
RAPGEF3-210ENST00000482843 UBE2Q2Q8WVN8 375 aa16.82■□□□□ 0.28
RAPGEF3-210ENST00000482843 JPH4Q96JJ6 628 aa16.82■□□□□ 0.28
RAPGEF3-210ENST00000482843 CTTNBP2Q8WZ74 1663 aa16.82■□□□□ 0.28
RAPGEF3-210ENST00000482843 MPHOSPH9Q99550 1183 aa16.81■□□□□ 0.28
RAPGEF3-210ENST00000482843 ABCA5Q8WWZ7 1642 aa16.8■□□□□ 0.28
RAPGEF3-210ENST00000482843 PKNOX2Q96KN3 472 aa16.79■□□□□ 0.28
RAPGEF3-210ENST00000482843 PLEKHD1A6NEE1 506 aa16.78■□□□□ 0.28
RAPGEF3-210ENST00000482843 CFAP43Q8NDM7 1665 aa16.78■□□□□ 0.28
RAPGEF3-210ENST00000482843 NAIPQ13075 1403 aa16.77■□□□□ 0.27
RAPGEF3-210ENST00000482843 ANP32EQ9BTT0 268 aa16.77■□□□□ 0.27
RAPGEF3-210ENST00000482843 IQGAP2Q13576 1575 aa16.76■□□□□ 0.27
RAPGEF3-210ENST00000482843 EPRSP07814 1512 aaKnown RBP16.76■□□□□ 0.27
RAPGEF3-210ENST00000482843 HFM1A2PYH4 1435 aa16.76■□□□□ 0.27
RAPGEF3-210ENST00000482843 UACAQ9BZF9 1416 aa16.75■□□□□ 0.27
RAPGEF3-210ENST00000482843 L3MBTL2Q969R5 705 aa16.75■□□□□ 0.27
RAPGEF3-210ENST00000482843 IFT140Q96RY7 1462 aa16.75■□□□□ 0.27
RAPGEF3-210ENST00000482843 TARBP1Q13395 1621 aaKnown RBP16.74■□□□□ 0.27
RAPGEF3-210ENST00000482843 HSPA5P11021 654 aaKnown RBP16.73■□□□□ 0.27
RAPGEF3-210ENST00000482843 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.73■□□□□ 0.27
RAPGEF3-210ENST00000482843 CCDC136Q96JN2 1154 aa16.72■□□□□ 0.27
RAPGEF3-210ENST00000482843 EIF4G2P78344 907 aaKnown RBP eCLIP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms