RNA–Protein interactions for RNA: ENST00000482218.2

CLCN5-205, Transcript of chloride voltage-gated channel 5, humanhuman

TSL 3 BASIC

Gene CLCN5, Length 449 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN5-205ENST00000482218 IFT140Q96RY7 1462 aa20.19■□□□□ 0.82
CLCN5-205ENST00000482218 TARBP1Q13395 1621 aaKnown RBP20.15■□□□□ 0.82
CLCN5-205ENST00000482218 ZNF608Q9ULD9 1512 aaPredicted RBP20.12■□□□□ 0.81
CLCN5-205ENST00000482218 TDRD9Q8NDG6 1382 aaKnown RBP20.11■□□□□ 0.81
CLCN5-205ENST00000482218 ABCA10Q8WWZ4 1543 aa20.07■□□□□ 0.8
CLCN5-205ENST00000482218 AQRO60306 1485 aaKnown RBP eCLIP20.07■□□□□ 0.8
CLCN5-205ENST00000482218 WDR97A6NE52 1622 aa19.98■□□□□ 0.79
CLCN5-205ENST00000482218 MYCNP04198 464 aaPredicted RBP19.98■□□□□ 0.79
CLCN5-205ENST00000482218 CHRDL2Q6WN34 429 aa19.97■□□□□ 0.79
CLCN5-205ENST00000482218 GAPVD1Q14C86 1478 aa19.97■□□□□ 0.79
CLCN5-205ENST00000482218 EIF4G3O43432 1585 aaKnown RBP19.94■□□□□ 0.78
CLCN5-205ENST00000482218 KIF27Q86VH2 1401 aa19.93■□□□□ 0.78
CLCN5-205ENST00000482218 POLA2Q14181 598 aa19.92■□□□□ 0.78
CLCN5-205ENST00000482218 GRIN2BQ13224 1484 aa19.92■□□□□ 0.78
CLCN5-205ENST00000482218 RUSC2Q8N2Y8 1516 aa19.92■□□□□ 0.78
CLCN5-205ENST00000482218 ABCA5Q8WWZ7 1642 aa19.91■□□□□ 0.78
CLCN5-205ENST00000482218 IGF1RP08069 1367 aa19.9■□□□□ 0.78
CLCN5-205ENST00000482218 ERICH3Q5RHP9 1530 aa19.82■□□□□ 0.76
CLCN5-205ENST00000482218 SNAPC4Q5SXM2 1469 aa19.82■□□□□ 0.76
CLCN5-205ENST00000482218 MAGI1Q96QZ7 1491 aaPredicted RBP19.8■□□□□ 0.76
CLCN5-205ENST00000482218 PBRM1Q86U86 1689 aa19.8■□□□□ 0.76
CLCN5-205ENST00000482218 FBLN2P98095 1184 aa19.79■□□□□ 0.76
CLCN5-205ENST00000482218 FAM9AQ8IZU1 332 aaPredicted RBP19.79■□□□□ 0.76
CLCN5-205ENST00000482218 CHMP7Q8WUX9 453 aaPredicted RBP19.79■□□□□ 0.76
CLCN5-205ENST00000482218 CSRNP3Q8WYN3 585 aa19.79■□□□□ 0.76
CLCN5-205ENST00000482218 FHAD1B1AJZ9 1412 aa19.76■□□□□ 0.75
CLCN5-205ENST00000482218 CARMIL1Q5VZK9 1371 aa19.75■□□□□ 0.75
CLCN5-205ENST00000482218 EEA1Q15075 1411 aa19.74■□□□□ 0.75
CLCN5-205ENST00000482218 SYNJ2O15056 1496 aa19.73■□□□□ 0.75
CLCN5-205ENST00000482218 OSCARQ8IYS5 282 aa19.72■□□□□ 0.75
CLCN5-205ENST00000482218 ZBTB12Q9Y330 459 aaPredicted RBP19.68■□□□□ 0.74
CLCN5-205ENST00000482218 ADAMTS12P58397 1594 aa19.68■□□□□ 0.74
CLCN5-205ENST00000482218 PRXQ9BXM0 1461 aa19.65■□□□□ 0.74
CLCN5-205ENST00000482218 GRIN2AQ12879 1464 aa19.64■□□□□ 0.73
CLCN5-205ENST00000482218 CUL7Q14999 1698 aa19.64■□□□□ 0.73
CLCN5-205ENST00000482218 CHD1O14646 1710 aa19.63■□□□□ 0.73
CLCN5-205ENST00000482218 AKT1S1Q96B36 256 aa19.63■□□□□ 0.73
CLCN5-205ENST00000482218 RAPGEF2Q9Y4G8 1499 aa19.62■□□□□ 0.73
CLCN5-205ENST00000482218 NUP160Q12769 1436 aa19.56■□□□□ 0.72
CLCN5-205ENST00000482218 DNAJC5Q9H3Z4 198 aa19.53■□□□□ 0.72
CLCN5-205ENST00000482218 SP7Q8TDD2 431 aaPredicted RBP19.52■□□□□ 0.72
CLCN5-205ENST00000482218 CEP170Q5SW79 1584 aa19.52■□□□□ 0.71
CLCN5-205ENST00000482218 EHMT2Q96KQ7 1210 aa19.51■□□□□ 0.71
CLCN5-205ENST00000482218 JPH4Q96JJ6 628 aa19.48■□□□□ 0.71
CLCN5-205ENST00000482218 KIAA0586Q9BVV6 1533 aa19.47■□□□□ 0.71
CLCN5-205ENST00000482218 KIF21BO75037 1637 aa19.47■□□□□ 0.71
CLCN5-205ENST00000482218 CLASP1Q7Z460 1538 aa19.46■□□□□ 0.71
CLCN5-205ENST00000482218 LOC105371045A0A1W2PR82 267 aa19.44■□□□□ 0.7
CLCN5-205ENST00000482218 UBTFP17480 764 aaKnown RBP19.44■□□□□ 0.7
CLCN5-205ENST00000482218 FOXD4L1Q9NU39 408 aa19.44■□□□□ 0.7
CLCN5-205ENST00000482218 GOLGA3Q08378 1498 aa19.41■□□□□ 0.7
CLCN5-205ENST00000482218 REM2Q8IYK8 340 aaPredicted RBP19.38■□□□□ 0.69
CLCN5-205ENST00000482218 SLC4A1APQ9BWU0 796 aaKnown RBP19.35■□□□□ 0.69
CLCN5-205ENST00000482218 IQGAP2Q13576 1575 aa19.33■□□□□ 0.69
CLCN5-205ENST00000482218 ATF5Q9Y2D1 282 aaPredicted RBP19.33■□□□□ 0.68
CLCN5-205ENST00000482218 PRG4Q92954 1404 aaPredicted RBP19.33■□□□□ 0.68
CLCN5-205ENST00000482218 SHROOM2Q13796 1616 aa19.33■□□□□ 0.68
CLCN5-205ENST00000482218 PIP4P2Q8N4L2 257 aa19.31■□□□□ 0.68
CLCN5-205ENST00000482218 CTTNBP2Q8WZ74 1663 aa19.3■□□□□ 0.68
CLCN5-205ENST00000482218 TNIKQ9UKE5 1360 aa19.3■□□□□ 0.68
CLCN5-205ENST00000482218 RANGAP1P46060 587 aaPredicted RBP19.29■□□□□ 0.68
CLCN5-205ENST00000482218 UGGT2Q9NYU1 1516 aa19.29■□□□□ 0.68
CLCN5-205ENST00000482218 ARHGEF11O15085 1522 aa19.28■□□□□ 0.68
CLCN5-205ENST00000482218 ERCC6L2Q5T890 1561 aa19.27■□□□□ 0.68
CLCN5-205ENST00000482218 P3H3Q8IVL6 736 aa19.24■□□□□ 0.67
CLCN5-205ENST00000482218 DISP1Q96F81 1524 aa19.24■□□□□ 0.67
CLCN5-205ENST00000482218 CARMIL2Q6F5E8 1435 aa19.24■□□□□ 0.67
CLCN5-205ENST00000482218 RIMBP3CA6NJZ7 1639 aa19.23■□□□□ 0.67
CLCN5-205ENST00000482218 RIMBP3BA6NNM3 1639 aa19.23■□□□□ 0.67
CLCN5-205ENST00000482218 RIMBP3Q9UFD9 1639 aa19.23■□□□□ 0.67
CLCN5-205ENST00000482218 CYB5RLQ6IPT4 315 aa19.22■□□□□ 0.67
CLCN5-205ENST00000482218 HAX1O00165 279 aa19.19■□□□□ 0.66
CLCN5-205ENST00000482218 PITPNM1O00562 1244 aa19.18■□□□□ 0.66
CLCN5-205ENST00000482218 PTPRGP23470 1445 aa19.17■□□□□ 0.66
CLCN5-205ENST00000482218 ARAP1Q96P48 1450 aa19.16■□□□□ 0.66
CLCN5-205ENST00000482218 TTBK1Q5TCY1 1321 aaPredicted RBP19.16■□□□□ 0.66
CLCN5-205ENST00000482218 KIAA0556O60303 1618 aa19.13■□□□□ 0.65
CLCN5-205ENST00000482218 SAMD9Q5K651 1589 aa19.12■□□□□ 0.65
CLCN5-205ENST00000482218 ARHGAP35Q9NRY4 1499 aa19.12■□□□□ 0.65
CLCN5-205ENST00000482218 CLIP1P30622 1438 aa19.1■□□□□ 0.65
CLCN5-205ENST00000482218 FXR2P51116 673 aaKnown RBP eCLIP19.1■□□□□ 0.65
CLCN5-205ENST00000482218 CEP162Q5TB80 1403 aa19.08■□□□□ 0.65
CLCN5-205ENST00000482218 EFCAB5A4FU69 1503 aa19.08■□□□□ 0.64
CLCN5-205ENST00000482218 FHOD3Q2V2M9 1422 aa19.08■□□□□ 0.64
CLCN5-205ENST00000482218 UACAQ9BZF9 1416 aa19.01■□□□□ 0.63
CLCN5-205ENST00000482218 PLB1Q6P1J6 1458 aa19■□□□□ 0.63
CLCN5-205ENST00000482218 UHRF1BP1LA0JNW5 1464 aa18.97■□□□□ 0.63
CLCN5-205ENST00000482218 FMN1Q68DA7 1419 aa18.96■□□□□ 0.63
CLCN5-205ENST00000482218 ABCA8O94911 1581 aa18.96■□□□□ 0.63
CLCN5-205ENST00000482218 NPM1P06748 294 aaKnown RBP eCLIP18.94■□□□□ 0.62
CLCN5-205ENST00000482218 ADCY10Q96PN6 1610 aa18.93■□□□□ 0.62
CLCN5-205ENST00000482218 SPDYE2BA6NHP3 402 aa18.93■□□□□ 0.62
CLCN5-205ENST00000482218 SPDYE6P0CI01 402 aa18.93■□□□□ 0.62
CLCN5-205ENST00000482218 ATXN8OSP0DMR3 200 aa18.93■□□□□ 0.62
CLCN5-205ENST00000482218 SPDYE2Q495Y8 402 aa18.93■□□□□ 0.62
CLCN5-205ENST00000482218 ATP1B4Q9UN42 357 aaPredicted RBP18.92■□□□□ 0.62
CLCN5-205ENST00000482218 ABCC2Q92887 1545 aa18.91■□□□□ 0.62
CLCN5-205ENST00000482218 ARID3CA6NKF2 412 aa18.89■□□□□ 0.61
CLCN5-205ENST00000482218 ATP10BO94823 1461 aa18.88■□□□□ 0.61
CLCN5-205ENST00000482218 RAPGEF6Q8TEU7 1601 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms