RNA–Protein interactions for RNA: ENST00000481210.5

SEC61A1-204, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 5

Gene SEC61A1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-204ENST00000481210 MAGI1Q96QZ7 1491 aaPredicted RBP9.71□□□□□ -0.86
SEC61A1-204ENST00000481210 KIF21BO75037 1637 aa9.7□□□□□ -0.86
SEC61A1-204ENST00000481210 ADAMTSL3P82987 1691 aa9.68□□□□□ -0.86
SEC61A1-204ENST00000481210 TDRD9Q8NDG6 1382 aaKnown RBP9.67□□□□□ -0.86
SEC61A1-204ENST00000481210 SHROOM2Q13796 1616 aa9.66□□□□□ -0.86
SEC61A1-204ENST00000481210 PRDM2Q13029 1718 aa9.65□□□□□ -0.86
SEC61A1-204ENST00000481210 ADCY10Q96PN6 1610 aa9.65□□□□□ -0.86
SEC61A1-204ENST00000481210 NPM1P06748 294 aaKnown RBP eCLIP9.64□□□□□ -0.87
SEC61A1-204ENST00000481210 SRCAPQ6ZRS2 3230 aa9.64□□□□□ -0.87
SEC61A1-204ENST00000481210 DNMBPQ6XZF7 1577 aa9.62□□□□□ -0.87
SEC61A1-204ENST00000481210 POLA1P09884 1462 aaPredicted RBP9.6□□□□□ -0.87
SEC61A1-204ENST00000481210 IQSEC2Q5JU85 1478 aa9.6□□□□□ -0.87
SEC61A1-204ENST00000481210 RAD54L2Q9Y4B4 1467 aa9.6□□□□□ -0.87
SEC61A1-204ENST00000481210 PPP6R1Q9UPN7 881 aa9.59□□□□□ -0.87
SEC61A1-204ENST00000481210 LTBP4Q8N2S1 1624 aa9.59□□□□□ -0.87
SEC61A1-204ENST00000481210 ABCC8Q09428 1581 aa9.58□□□□□ -0.88
SEC61A1-204ENST00000481210 MADDQ8WXG6 1647 aa9.57□□□□□ -0.88
SEC61A1-204ENST00000481210 ADRA2BP18089 450 aa9.57□□□□□ -0.88
SEC61A1-204ENST00000481210 GRIN2BQ13224 1484 aa9.57□□□□□ -0.88
SEC61A1-204ENST00000481210 GLI2P10070 1586 aa9.57□□□□□ -0.88
SEC61A1-204ENST00000481210 WDR97A6NE52 1622 aa9.56□□□□□ -0.88
SEC61A1-204ENST00000481210 STRCQ7RTU9 1775 aa9.55□□□□□ -0.88
SEC61A1-204ENST00000481210 PIAS4Q8N2W9 510 aaPredicted RBP9.55□□□□□ -0.88
SEC61A1-204ENST00000481210 SETD1AO15047 1707 aaKnown RBP9.53□□□□□ -0.88
SEC61A1-204ENST00000481210 MSH5O43196 834 aa9.52□□□□□ -0.89
SEC61A1-204ENST00000481210 PBRM1Q86U86 1689 aa9.51□□□□□ -0.89
SEC61A1-204ENST00000481210 HSPA1LP34931 641 aa9.51□□□□□ -0.89
SEC61A1-204ENST00000481210 RGS17Q9UGC6 210 aaPredicted RBP9.51□□□□□ -0.89
SEC61A1-204ENST00000481210 MAP3K4Q9Y6R4 1608 aa9.51□□□□□ -0.89
SEC61A1-204ENST00000481210 BCORL1Q5H9F3 1711 aa9.51□□□□□ -0.89
SEC61A1-204ENST00000481210 RIMS1Q86UR5 1692 aaKnown RBP9.5□□□□□ -0.89
SEC61A1-204ENST00000481210 PTPRTO14522 1441 aa9.49□□□□□ -0.89
SEC61A1-204ENST00000481210 NUP160Q12769 1436 aa9.49□□□□□ -0.89
SEC61A1-204ENST00000481210 PRG4Q92954 1404 aaPredicted RBP9.49□□□□□ -0.89
SEC61A1-204ENST00000481210 UBAP1LF5GYI3 381 aa9.49□□□□□ -0.89
SEC61A1-204ENST00000481210 TEX14Q8IWB6 1497 aa9.48□□□□□ -0.89
SEC61A1-204ENST00000481210 SOGA1O94964 1423 aa9.48□□□□□ -0.89
SEC61A1-204ENST00000481210 YEATS2Q9ULM3 1422 aa9.48□□□□□ -0.89
SEC61A1-204ENST00000481210 WIZO95785 1651 aa9.47□□□□□ -0.89
SEC61A1-204ENST00000481210 GRIN2AQ12879 1464 aa9.47□□□□□ -0.89
SEC61A1-204ENST00000481210 DMRT2Q9Y5R5 561 aa9.44□□□□□ -0.9
SEC61A1-204ENST00000481210 CFAP43Q8NDM7 1665 aa9.43□□□□□ -0.9
SEC61A1-204ENST00000481210 ASXL2Q76L83 1435 aa9.41□□□□□ -0.9
SEC61A1-204ENST00000481210 KIAA0586Q9BVV6 1533 aa9.4□□□□□ -0.91
SEC61A1-204ENST00000481210 POTEAQ6S8J7 498 aa9.38□□□□□ -0.91
SEC61A1-204ENST00000481210 UPF1Q92900 1129 aaKnown RBP eCLIP9.38□□□□□ -0.91
SEC61A1-204ENST00000481210 PLB1Q6P1J6 1458 aa9.38□□□□□ -0.91
SEC61A1-204ENST00000481210 PREX1Q8TCU6 1659 aa9.37□□□□□ -0.91
SEC61A1-204ENST00000481210 EPRSP07814 1512 aaKnown RBP9.36□□□□□ -0.91
SEC61A1-204ENST00000481210 SCAF1Q9H7N4 1312 aaKnown RBP9.34□□□□□ -0.91
SEC61A1-204ENST00000481210 FGD5Q6ZNL6 1462 aa9.34□□□□□ -0.91
SEC61A1-204ENST00000481210 JPH4Q96JJ6 628 aa9.33□□□□□ -0.92
SEC61A1-204ENST00000481210 CUL7Q14999 1698 aa9.32□□□□□ -0.92
SEC61A1-204ENST00000481210 ADAMTS12P58397 1594 aa9.32□□□□□ -0.92
SEC61A1-204ENST00000481210 PIP4K2BP78356 416 aa9.31□□□□□ -0.92
SEC61A1-204ENST00000481210 ABCC2Q92887 1545 aa9.31□□□□□ -0.92
SEC61A1-204ENST00000481210 ABCA5Q8WWZ7 1642 aa9.3□□□□□ -0.92
SEC61A1-204ENST00000481210 ARID4BQ4LE39 1312 aaPredicted RBP9.28□□□□□ -0.92
SEC61A1-204ENST00000481210 ZNF335Q9H4Z2 1342 aaPredicted RBP9.26□□□□□ -0.93
SEC61A1-204ENST00000481210 TTC37Q6PGP7 1564 aa9.24□□□□□ -0.93
SEC61A1-204ENST00000481210 SETBP1Q9Y6X0 1596 aa9.24□□□□□ -0.93
SEC61A1-204ENST00000481210 RBM33Q96EV2 1170 aaKnown RBP9.24□□□□□ -0.93
SEC61A1-204ENST00000481210 MAGI3Q5TCQ9 1506 aa9.24□□□□□ -0.93
SEC61A1-204ENST00000481210 RUSC2Q8N2Y8 1516 aa9.24□□□□□ -0.93
SEC61A1-204ENST00000481210 SLC34A2O95436 690 aa9.23□□□□□ -0.93
SEC61A1-204ENST00000481210 FER1L4A9Z1Z3 1794 aa9.21□□□□□ -0.94
SEC61A1-204ENST00000481210 ARAP3Q8WWN8 1544 aa9.21□□□□□ -0.94
SEC61A1-204ENST00000481210 ALKQ9UM73 1620 aa9.2□□□□□ -0.94
SEC61A1-204ENST00000481210 TOP2AP11388 1531 aaKnown RBP9.2□□□□□ -0.94
SEC61A1-204ENST00000481210 UHRF1BP1Q6BDS2 1440 aa9.18□□□□□ -0.94
SEC61A1-204ENST00000481210 SIGLEC1Q9BZZ2 1709 aa9.18□□□□□ -0.94
SEC61A1-204ENST00000481210 KIAA0556O60303 1618 aa9.17□□□□□ -0.94
SEC61A1-204ENST00000481210 TOM1O60784 492 aa9.17□□□□□ -0.94
SEC61A1-204ENST00000481210 FHAD1B1AJZ9 1412 aa9.16□□□□□ -0.94
SEC61A1-204ENST00000481210 CD109Q6YHK3 1445 aa9.16□□□□□ -0.94
SEC61A1-204ENST00000481210 NCOA1Q15788 1441 aa9.15□□□□□ -0.94
SEC61A1-204ENST00000481210 FRMPD1Q5SYB0 1578 aa9.13□□□□□ -0.95
SEC61A1-204ENST00000481210 SENP3-EIF4A1A0A087X0R7 540 aa9.13□□□□□ -0.95
SEC61A1-204ENST00000481210 ARHGEF40Q8TER5 1519 aa9.13□□□□□ -0.95
SEC61A1-204ENST00000481210 ABCA10Q8WWZ4 1543 aa9.13□□□□□ -0.95
SEC61A1-204ENST00000481210 PTPRGP23470 1445 aa9.13□□□□□ -0.95
SEC61A1-204ENST00000481210 ZCCHC11Q5TAX3 1644 aaKnown RBP9.13□□□□□ -0.95
SEC61A1-204ENST00000481210 CUX1P39880 1505 aa9.12□□□□□ -0.95
SEC61A1-204ENST00000481210 CEBPAP49715 358 aaPredicted RBP9.12□□□□□ -0.95
SEC61A1-204ENST00000481210 UHRF1BP1LA0JNW5 1464 aa9.11□□□□□ -0.95
SEC61A1-204ENST00000481210 RAPGEF3O95398 923 aa9.11□□□□□ -0.95
SEC61A1-204ENST00000481210 KDM5BQ9UGL1 1544 aa9.1□□□□□ -0.95
SEC61A1-204ENST00000481210 TTBK1Q5TCY1 1321 aaPredicted RBP9.1□□□□□ -0.95
SEC61A1-204ENST00000481210 CCDC88BA6NC98 1476 aa9.1□□□□□ -0.95
SEC61A1-204ENST00000481210 POTEDQ86YR6 584 aa9.09□□□□□ -0.95
SEC61A1-204ENST00000481210 PCDH10Q9P2E7 1040 aa9.09□□□□□ -0.95
SEC61A1-204ENST00000481210 WDR7Q9Y4E6 1490 aa9.08□□□□□ -0.96
SEC61A1-204ENST00000481210 POGZQ7Z3K3 1410 aa9.08□□□□□ -0.96
SEC61A1-204ENST00000481210 YY1P25490 414 aa9.08□□□□□ -0.96
SEC61A1-204ENST00000481210 LRP5O75197 1615 aa9.07□□□□□ -0.96
SEC61A1-204ENST00000481210 ZRANB1Q9UGI0 708 aa9.07□□□□□ -0.96
SEC61A1-204ENST00000481210 FANCAO15360 1455 aa9.07□□□□□ -0.96
SEC61A1-204ENST00000481210 TRIM52Q96A61 297 aa9.06□□□□□ -0.96
SEC61A1-204ENST00000481210 SETD1BQ9UPS6 1966 aaKnown RBP9.06□□□□□ -0.96
SEC61A1-204ENST00000481210 CAMSAP1Q5T5Y3 1602 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms