RNA–Protein interactions for RNA: ENST00000480612.1

LCA5L-216, Transcript of LCA5L, lebercilin like, humanhuman

TSL 1 (best)

Gene LCA5L, Length 772 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5L-216ENST00000480612 THOC2Q8NI27 1593 aaKnown RBP13.93□□□□□ -0.18
LCA5L-216ENST00000480612 PIP4P2Q8N4L2 257 aa13.9□□□□□ -0.18
LCA5L-216ENST00000480612 MRC2Q9UBG0 1479 aa13.87□□□□□ -0.19
LCA5L-216ENST00000480612 FANCD2Q9BXW9 1451 aa13.86□□□□□ -0.19
LCA5L-216ENST00000480612 CEP164Q9UPV0 1460 aa13.86□□□□□ -0.19
LCA5L-216ENST00000480612 CFTRP13569 1480 aa13.85□□□□□ -0.19
LCA5L-216ENST00000480612 FXR2P51116 673 aaKnown RBP eCLIP13.84□□□□□ -0.19
LCA5L-216ENST00000480612 CCDC88BA6NC98 1476 aa13.82□□□□□ -0.2
LCA5L-216ENST00000480612 SPDYE1Q8NFV5 336 aaPredicted RBP13.8□□□□□ -0.2
LCA5L-216ENST00000480612 WDR62O43379 1518 aa13.79□□□□□ -0.2
LCA5L-216ENST00000480612 CLEC11AQ9Y240 323 aa13.76□□□□□ -0.21
LCA5L-216ENST00000480612 SUPT5HO00267 1087 aaKnown RBP13.72□□□□□ -0.21
LCA5L-216ENST00000480612 PRDM2Q13029 1718 aa13.72□□□□□ -0.21
LCA5L-216ENST00000480612 URB2Q14146 1524 aaKnown RBP13.71□□□□□ -0.21
LCA5L-216ENST00000480612 SPDYE4A6NLX3 237 aa13.67□□□□□ -0.22
LCA5L-216ENST00000480612 PRKAR2AP13861 404 aaKnown RBP13.62□□□□□ -0.23
LCA5L-216ENST00000480612 TOPBP1Q92547 1522 aa13.6□□□□□ -0.23
LCA5L-216ENST00000480612 ABCC8Q09428 1581 aa13.58□□□□□ -0.24
LCA5L-216ENST00000480612 IFT140Q96RY7 1462 aa13.56□□□□□ -0.24
LCA5L-216ENST00000480612 PRR29P0C7W0 189 aa13.56□□□□□ -0.24
LCA5L-216ENST00000480612 DNMBPQ6XZF7 1577 aa13.56□□□□□ -0.24
LCA5L-216ENST00000480612 CHADLQ6NUI6 762 aa13.54□□□□□ -0.24
LCA5L-216ENST00000480612 ZNF608Q9ULD9 1512 aaPredicted RBP13.52□□□□□ -0.25
LCA5L-216ENST00000480612 HAX1O00165 279 aa13.5□□□□□ -0.25
LCA5L-216ENST00000480612 SP7Q8TDD2 431 aaPredicted RBP13.49□□□□□ -0.25
LCA5L-216ENST00000480612 POLA1P09884 1462 aaPredicted RBP13.48□□□□□ -0.25
LCA5L-216ENST00000480612 EVX2Q03828 476 aa13.46□□□□□ -0.25
LCA5L-216ENST00000480612 AQRO60306 1485 aaKnown RBP eCLIP13.45□□□□□ -0.26
LCA5L-216ENST00000480612 RAD54L2Q9Y4B4 1467 aa13.45□□□□□ -0.26
LCA5L-216ENST00000480612 PROM2Q8N271 834 aa13.45□□□□□ -0.26
LCA5L-216ENST00000480612 EIF4G3O43432 1585 aaKnown RBP13.45□□□□□ -0.26
LCA5L-216ENST00000480612 SOGA1O94964 1423 aa13.44□□□□□ -0.26
LCA5L-216ENST00000480612 FGD5Q6ZNL6 1462 aa13.43□□□□□ -0.26
LCA5L-216ENST00000480612 CUX1P39880 1505 aa13.43□□□□□ -0.26
LCA5L-216ENST00000480612 TARBP1Q13395 1621 aaKnown RBP13.42□□□□□ -0.26
LCA5L-216ENST00000480612 TRIM41Q8WV44 630 aa13.42□□□□□ -0.26
LCA5L-216ENST00000480612 STAG3Q9UJ98 1225 aa13.4□□□□□ -0.26
LCA5L-216ENST00000480612 TDRD9Q8NDG6 1382 aaKnown RBP13.4□□□□□ -0.26
LCA5L-216ENST00000480612 C19orf67A6NJJ6 358 aa13.39□□□□□ -0.27
LCA5L-216ENST00000480612 CREBZFQ9NS37 354 aa13.36□□□□□ -0.27
LCA5L-216ENST00000480612 FARP1Q9Y4F1 1045 aaPredicted RBP13.34□□□□□ -0.27
LCA5L-216ENST00000480612 CHD1O14646 1710 aa13.32□□□□□ -0.28
LCA5L-216ENST00000480612 SNAPC4Q5SXM2 1469 aa13.31□□□□□ -0.28
LCA5L-216ENST00000480612 WRNQ14191 1432 aaPredicted RBP eCLIP13.3□□□□□ -0.28
LCA5L-216ENST00000480612 CHMP7Q8WUX9 453 aaPredicted RBP13.3□□□□□ -0.28
LCA5L-216ENST00000480612 WDR97A6NE52 1622 aa13.3□□□□□ -0.28
LCA5L-216ENST00000480612 GRIN2BQ13224 1484 aa13.29□□□□□ -0.28
LCA5L-216ENST00000480612 GAPVD1Q14C86 1478 aa13.27□□□□□ -0.29
LCA5L-216ENST00000480612 SYNJ1O43426 1573 aa13.26□□□□□ -0.29
LCA5L-216ENST00000480612 ABCA10Q8WWZ4 1543 aa13.26□□□□□ -0.29
LCA5L-216ENST00000480612 MAGI1Q96QZ7 1491 aaPredicted RBP13.26□□□□□ -0.29
LCA5L-216ENST00000480612 RIMBP3CA6NJZ7 1639 aa13.25□□□□□ -0.29
LCA5L-216ENST00000480612 RIMBP3BA6NNM3 1639 aa13.25□□□□□ -0.29
LCA5L-216ENST00000480612 TOP2BQ02880 1626 aa13.25□□□□□ -0.29
LCA5L-216ENST00000480612 RIMBP3Q9UFD9 1639 aa13.25□□□□□ -0.29
LCA5L-216ENST00000480612 BIVM-ERCC5R4GMW8 1640 aa13.24□□□□□ -0.29
LCA5L-216ENST00000480612 ARHGEF11O15085 1522 aa13.23□□□□□ -0.29
LCA5L-216ENST00000480612 PBRM1Q86U86 1689 aa13.23□□□□□ -0.29
LCA5L-216ENST00000480612 FKBP8Q14318 412 aa13.22□□□□□ -0.29
LCA5L-216ENST00000480612 SYNJ2O15056 1496 aa13.22□□□□□ -0.29
LCA5L-216ENST00000480612 ABCA5Q8WWZ7 1642 aa13.21□□□□□ -0.29
LCA5L-216ENST00000480612 CD44P16070 742 aaKnown RBP13.2□□□□□ -0.3
LCA5L-216ENST00000480612 MNX1P50219 401 aaPredicted RBP13.19□□□□□ -0.3
LCA5L-216ENST00000480612 CYB5RLQ6IPT4 315 aa13.19□□□□□ -0.3
LCA5L-216ENST00000480612 CLASP1Q7Z460 1538 aa13.13□□□□□ -0.31
LCA5L-216ENST00000480612 ADAMTS12P58397 1594 aa13.12□□□□□ -0.31
LCA5L-216ENST00000480612 GABBR2O75899 941 aa13.12□□□□□ -0.31
LCA5L-216ENST00000480612 GRIN2AQ12879 1464 aa13.11□□□□□ -0.31
LCA5L-216ENST00000480612 ARAP1Q96P48 1450 aa13.11□□□□□ -0.31
LCA5L-216ENST00000480612 FHAD1B1AJZ9 1412 aa13.11□□□□□ -0.31
LCA5L-216ENST00000480612 ERICH3Q5RHP9 1530 aa13.1□□□□□ -0.31
LCA5L-216ENST00000480612 KIF27Q86VH2 1401 aa13.05□□□□□ -0.32
LCA5L-216ENST00000480612 CEP170Q5SW79 1584 aa13.04□□□□□ -0.32
LCA5L-216ENST00000480612 NUP160Q12769 1436 aa13.04□□□□□ -0.32
LCA5L-216ENST00000480612 ZNF579Q8NAF0 562 aaKnown RBP13.03□□□□□ -0.32
LCA5L-216ENST00000480612 ZRANB1Q9UGI0 708 aa13.03□□□□□ -0.32
LCA5L-216ENST00000480612 NPM1P06748 294 aaKnown RBP eCLIP13.02□□□□□ -0.33
LCA5L-216ENST00000480612 IGF1RP08069 1367 aa12.99□□□□□ -0.33
LCA5L-216ENST00000480612 ERCC6L2Q5T890 1561 aa12.98□□□□□ -0.33
LCA5L-216ENST00000480612 MIER1Q8N108 512 aa12.96□□□□□ -0.33
LCA5L-216ENST00000480612 PRG4Q92954 1404 aaPredicted RBP12.96□□□□□ -0.34
LCA5L-216ENST00000480612 CUL7Q14999 1698 aa12.96□□□□□ -0.34
LCA5L-216ENST00000480612 JPH4Q96JJ6 628 aa12.95□□□□□ -0.34
LCA5L-216ENST00000480612 CARMIL1Q5VZK9 1371 aa12.94□□□□□ -0.34
LCA5L-216ENST00000480612 SHROOM2Q13796 1616 aa12.93□□□□□ -0.34
LCA5L-216ENST00000480612 PHF12Q96QT6 1004 aa12.92□□□□□ -0.34
LCA5L-216ENST00000480612 RUSC2Q8N2Y8 1516 aa12.92□□□□□ -0.34
LCA5L-216ENST00000480612 PAK3O75914 559 aaPredicted RBP12.91□□□□□ -0.34
LCA5L-216ENST00000480612 CLCN6P51797 869 aa12.91□□□□□ -0.34
LCA5L-216ENST00000480612 POTEIP0CG38 1075 aa12.9□□□□□ -0.34
LCA5L-216ENST00000480612 PLCD3Q8N3E9 789 aa12.89□□□□□ -0.35
LCA5L-216ENST00000480612 KIAA0586Q9BVV6 1533 aa12.88□□□□□ -0.35
LCA5L-216ENST00000480612 PLEKHG5O94827 1062 aa12.88□□□□□ -0.35
LCA5L-216ENST00000480612 TTBK1Q5TCY1 1321 aaPredicted RBP12.88□□□□□ -0.35
LCA5L-216ENST00000480612 GALR2O43603 387 aaPredicted RBP12.87□□□□□ -0.35
LCA5L-216ENST00000480612 RASEFQ8IZ41 740 aa12.84□□□□□ -0.35
LCA5L-216ENST00000480612 TSPYL2Q9H2G4 693 aaPredicted RBP12.84□□□□□ -0.35
LCA5L-216ENST00000480612 RAPGEF2Q9Y4G8 1499 aa12.83□□□□□ -0.36
LCA5L-216ENST00000480612 FBXO3Q9UK99 471 aa12.82□□□□□ -0.36
LCA5L-216ENST00000480612 CCDC61Q9Y6R9 512 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms