RNA–Protein interactions for RNA: ENST00000480612.1

LCA5L-216, Transcript of LCA5L, lebercilin like, humanhuman

TSL 1 (best)

Gene LCA5L, Length 772 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5L-216ENST00000480612 AEBP2Q6ZN18 517 aaPredicted RBP25.81■■□□□ 1.72
LCA5L-216ENST00000480612 CHIC1Q5VXU3 224 aa24.67■■□□□ 1.54
LCA5L-216ENST00000480612 SENP3Q9H4L4 574 aaPredicted RBP21.89■■□□□ 1.09
LCA5L-216ENST00000480612 PHF23Q9BUL5 403 aaPredicted RBP21.69■■□□□ 1.06
LCA5L-216ENST00000480612 FOXD1Q16676 465 aa20.42■□□□□ 0.86
LCA5L-216ENST00000480612 PLPPR3Q6T4P5 718 aa19.76■□□□□ 0.75
LCA5L-216ENST00000480612 PPP6R1Q9UPN7 881 aa19.29■□□□□ 0.68
LCA5L-216ENST00000480612 ADRA2BP18089 450 aa19.22■□□□□ 0.67
LCA5L-216ENST00000480612 PIAS4Q8N2W9 510 aaPredicted RBP19.11■□□□□ 0.65
LCA5L-216ENST00000480612 MSH5O43196 834 aa18.96■□□□□ 0.63
LCA5L-216ENST00000480612 NISCHQ9Y2I1 1504 aa18.54■□□□□ 0.56
LCA5L-216ENST00000480612 POTEDQ86YR6 584 aa18.19■□□□□ 0.5
LCA5L-216ENST00000480612 MAPK8IP2Q13387 824 aaPredicted RBP17.59■□□□□ 0.41
LCA5L-216ENST00000480612 SCAF1Q9H7N4 1312 aaKnown RBP17.46■□□□□ 0.38
LCA5L-216ENST00000480612 DMRT2Q9Y5R5 561 aa17.43■□□□□ 0.38
LCA5L-216ENST00000480612 PPP4R3CPQ6ZMV5 832 aa17.38■□□□□ 0.37
LCA5L-216ENST00000480612 CNKSR2Q8WXI2 1034 aa16.98■□□□□ 0.31
LCA5L-216ENST00000480612 HOXD11P31277 338 aaPredicted RBP16.87■□□□□ 0.29
LCA5L-216ENST00000480612 RNF216Q9NWF9 866 aaPredicted RBP16.78■□□□□ 0.28
LCA5L-216ENST00000480612 NCBP3Q53F19 620 aaKnown RBP16.7■□□□□ 0.26
LCA5L-216ENST00000480612 DCAF8L1A6NGE4 600 aa16.62■□□□□ 0.25
LCA5L-216ENST00000480612 NPM3O75607 178 aaKnown RBP16.56■□□□□ 0.24
LCA5L-216ENST00000480612 CCDC180Q9P1Z9 1646 aa16.52■□□□□ 0.24
LCA5L-216ENST00000480612 KCNA4P22459 653 aa16.46■□□□□ 0.23
LCA5L-216ENST00000480612 ABCC9O60706 1549 aa16.45■□□□□ 0.22
LCA5L-216ENST00000480612 RNF39Q9H2S5 420 aa16.26■□□□□ 0.19
LCA5L-216ENST00000480612 DNAJC5BQ9UF47 199 aa16.22■□□□□ 0.19
LCA5L-216ENST00000480612 CACNB1Q02641 598 aaPredicted RBP16.12■□□□□ 0.17
LCA5L-216ENST00000480612 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.01■□□□□ 0.15
LCA5L-216ENST00000480612 C1QBPQ07021 282 aaKnown RBP15.98■□□□□ 0.15
LCA5L-216ENST00000480612 SLC4A2P04920 1241 aa15.78■□□□□ 0.12
LCA5L-216ENST00000480612 U3KPZ7 1027 aaPredicted RBP15.78■□□□□ 0.12
LCA5L-216ENST00000480612 DCAF8L2P0C7V8 631 aa15.73■□□□□ 0.11
LCA5L-216ENST00000480612 RB1CC1Q8TDY2 1594 aa15.69■□□□□ 0.1
LCA5L-216ENST00000480612 NACADO15069 1562 aa15.6■□□□□ 0.09
LCA5L-216ENST00000480612 SLC4A1APQ9BWU0 796 aaKnown RBP15.53■□□□□ 0.08
LCA5L-216ENST00000480612 SPINK5Q9NQ38 1064 aaPredicted RBP15.49■□□□□ 0.07
LCA5L-216ENST00000480612 ZCCHC6Q5VYS8 1495 aaKnown RBP15.4■□□□□ 0.06
LCA5L-216ENST00000480612 MYO15BQ96JP2 1530 aa15.39■□□□□ 0.05
LCA5L-216ENST00000480612 CAPN15O75808 1086 aa15.38■□□□□ 0.05
LCA5L-216ENST00000480612 PABPN1Q86U42 306 aaKnown RBP eCLIP15.37■□□□□ 0.05
LCA5L-216ENST00000480612 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.3■□□□□ 0.04
LCA5L-216ENST00000480612 HNRNPUL2Q1KMD3 747 aaKnown RBP15.3■□□□□ 0.04
LCA5L-216ENST00000480612 DSG3P32926 999 aa15.29■□□□□ 0.04
LCA5L-216ENST00000480612 UNC13AQ9UPW8 1703 aa15.29■□□□□ 0.04
LCA5L-216ENST00000480612 MYCNP04198 464 aaPredicted RBP15.28■□□□□ 0.04
LCA5L-216ENST00000480612 DCAF1Q9Y4B6 1507 aa15.27■□□□□ 0.04
LCA5L-216ENST00000480612 SAMD1Q6SPF0 538 aaPredicted RBP15.25■□□□□ 0.03
LCA5L-216ENST00000480612 FOXD4L1Q9NU39 408 aa15.25■□□□□ 0.03
LCA5L-216ENST00000480612 APLP2Q06481 763 aa15.23■□□□□ 0.03
LCA5L-216ENST00000480612 ZBTB22O15209 634 aa15.2■□□□□ 0.02
LCA5L-216ENST00000480612 TRHP20396 242 aaPredicted RBP15.19■□□□□ 0.02
LCA5L-216ENST00000480612 BICRAQ9NZM4 1560 aa15.17■□□□□ 0.02
LCA5L-216ENST00000480612 ZNF219Q9P2Y4 722 aaPredicted RBP15.17■□□□□ 0.02
LCA5L-216ENST00000480612 SCRIBQ14160 1630 aa15.16■□□□□ 0.02
LCA5L-216ENST00000480612 ABCB7O75027 752 aa15.09■□□□□ 0.01
LCA5L-216ENST00000480612 SHROOM4Q9ULL8 1493 aa14.99□□□□□ -0.01
LCA5L-216ENST00000480612 ATF5Q9Y2D1 282 aaPredicted RBP14.98□□□□□ -0.01
LCA5L-216ENST00000480612 POLA2Q14181 598 aa14.84□□□□□ -0.03
LCA5L-216ENST00000480612 EIF4G1Q04637 1599 aaKnown RBP14.82□□□□□ -0.04
LCA5L-216ENST00000480612 CC2D2AQ9P2K1 1620 aa14.81□□□□□ -0.04
LCA5L-216ENST00000480612 CECR2Q9BXF3 1484 aa14.78□□□□□ -0.04
LCA5L-216ENST00000480612 ATXN8OSP0DMR3 200 aa14.73□□□□□ -0.05
LCA5L-216ENST00000480612 CSRNP3Q8WYN3 585 aa14.63□□□□□ -0.07
LCA5L-216ENST00000480612 EHMT2Q96KQ7 1210 aa14.54□□□□□ -0.08
LCA5L-216ENST00000480612 ZBTB12Q9Y330 459 aaPredicted RBP14.53□□□□□ -0.08
LCA5L-216ENST00000480612 RBM42Q9BTD8 480 aaKnown RBP14.51□□□□□ -0.09
LCA5L-216ENST00000480612 SMARCA4P51532 1647 aa14.43□□□□□ -0.1
LCA5L-216ENST00000480612 OSCARQ8IYS5 282 aa14.41□□□□□ -0.1
LCA5L-216ENST00000480612 ATAD2BQ9ULI0 1458 aa14.4□□□□□ -0.1
LCA5L-216ENST00000480612 BAZ1AQ9NRL2 1556 aaPredicted RBP14.39□□□□□ -0.11
LCA5L-216ENST00000480612 NCAPD3P42695 1498 aa14.39□□□□□ -0.11
LCA5L-216ENST00000480612 SMARCA2P51531 1590 aa14.38□□□□□ -0.11
LCA5L-216ENST00000480612 BAZ1BQ9UIG0 1483 aaKnown RBP14.31□□□□□ -0.12
LCA5L-216ENST00000480612 HMGXB3Q12766 1538 aa14.31□□□□□ -0.12
LCA5L-216ENST00000480612 MKRN4PQ13434 485 aaPredicted RBP14.3□□□□□ -0.12
LCA5L-216ENST00000480612 MROH2BQ7Z745 1585 aa14.3□□□□□ -0.12
LCA5L-216ENST00000480612 POTEHQ6S545 545 aa14.28□□□□□ -0.12
LCA5L-216ENST00000480612 FBLN2P98095 1184 aa14.25□□□□□ -0.13
LCA5L-216ENST00000480612 AKT1S1Q96B36 256 aa14.25□□□□□ -0.13
LCA5L-216ENST00000480612 PEG3Q9GZU2 1588 aa14.24□□□□□ -0.13
LCA5L-216ENST00000480612 ERCC6Q03468 1493 aa14.22□□□□□ -0.13
LCA5L-216ENST00000480612 CHRDL2Q6WN34 429 aa14.16□□□□□ -0.14
LCA5L-216ENST00000480612 NESP48681 1621 aa14.15□□□□□ -0.14
LCA5L-216ENST00000480612 WIZO95785 1651 aa14.14□□□□□ -0.15
LCA5L-216ENST00000480612 REM2Q8IYK8 340 aaPredicted RBP14.14□□□□□ -0.15
LCA5L-216ENST00000480612 DNAJC5Q9H3Z4 198 aa14.14□□□□□ -0.15
LCA5L-216ENST00000480612 SPDYE2BA6NHP3 402 aa14.13□□□□□ -0.15
LCA5L-216ENST00000480612 SPDYE6P0CI01 402 aa14.13□□□□□ -0.15
LCA5L-216ENST00000480612 SPDYE2Q495Y8 402 aa14.13□□□□□ -0.15
LCA5L-216ENST00000480612 RSF1Q96T23 1441 aaPredicted RBP14.07□□□□□ -0.16
LCA5L-216ENST00000480612 CUX2O14529 1486 aa14.05□□□□□ -0.16
LCA5L-216ENST00000480612 LAMC3Q9Y6N6 1575 aa14.05□□□□□ -0.16
LCA5L-216ENST00000480612 PITPNM1O00562 1244 aa14.02□□□□□ -0.17
LCA5L-216ENST00000480612 SSUH2Q9Y2M2 353 aa14.02□□□□□ -0.17
LCA5L-216ENST00000480612 PDS5BQ9NTI5 1447 aa14□□□□□ -0.17
LCA5L-216ENST00000480612 CADPSQ9ULU8 1353 aa14□□□□□ -0.17
LCA5L-216ENST00000480612 TOP2AP11388 1531 aaKnown RBP13.98□□□□□ -0.17
LCA5L-216ENST00000480612 ZNF692Q9BU19 519 aaPredicted RBP13.97□□□□□ -0.17
LCA5L-216ENST00000480612 KIF21AQ7Z4S6 1674 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms