RNA–Protein interactions for RNA: ENST00000480237.1

LINC00173-203, long intergenic non-protein coding RNA 173, humanhuman

TSL 2 BASIC

Gene LINC00173, Length 1,597 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-203ENST00000480237 GOLGA3Q08378 1498 aa16.94■□□□□ 0.3
LINC00173-203ENST00000480237 CSRNP3Q8WYN3 585 aa16.94■□□□□ 0.3
LINC00173-203ENST00000480237 ERICH3Q5RHP9 1530 aa16.93■□□□□ 0.3
LINC00173-203ENST00000480237 CTTNBP2Q8WZ74 1663 aa16.9■□□□□ 0.3
LINC00173-203ENST00000480237 EIF4G3O43432 1585 aaKnown RBP16.87■□□□□ 0.29
LINC00173-203ENST00000480237 IFT140Q96RY7 1462 aa16.85■□□□□ 0.29
LINC00173-203ENST00000480237 RAPGEF2Q9Y4G8 1499 aa16.85■□□□□ 0.29
LINC00173-203ENST00000480237 PRXQ9BXM0 1461 aa16.84■□□□□ 0.29
LINC00173-203ENST00000480237 GAPVD1Q14C86 1478 aa16.82■□□□□ 0.28
LINC00173-203ENST00000480237 U3KPZ7 1027 aaPredicted RBP16.78■□□□□ 0.28
LINC00173-203ENST00000480237 ADAMTS12P58397 1594 aa16.78■□□□□ 0.28
LINC00173-203ENST00000480237 TNIKQ9UKE5 1360 aa16.77■□□□□ 0.28
LINC00173-203ENST00000480237 RNF39Q9H2S5 420 aa16.76■□□□□ 0.27
LINC00173-203ENST00000480237 TDRD9Q8NDG6 1382 aaKnown RBP16.75■□□□□ 0.27
LINC00173-203ENST00000480237 UBTFP17480 764 aaKnown RBP16.75■□□□□ 0.27
LINC00173-203ENST00000480237 IGF1RP08069 1367 aa16.75■□□□□ 0.27
LINC00173-203ENST00000480237 ZNF608Q9ULD9 1512 aaPredicted RBP16.74■□□□□ 0.27
LINC00173-203ENST00000480237 CEP162Q5TB80 1403 aa16.74■□□□□ 0.27
LINC00173-203ENST00000480237 CARMIL1Q5VZK9 1371 aa16.72■□□□□ 0.27
LINC00173-203ENST00000480237 MYCNP04198 464 aaPredicted RBP16.71■□□□□ 0.27
LINC00173-203ENST00000480237 AQRO60306 1485 aaKnown RBP eCLIP16.7■□□□□ 0.26
LINC00173-203ENST00000480237 GRIN2BQ13224 1484 aa16.7■□□□□ 0.26
LINC00173-203ENST00000480237 CHD1O14646 1710 aa16.66■□□□□ 0.26
LINC00173-203ENST00000480237 SNAPC4Q5SXM2 1469 aa16.63■□□□□ 0.25
LINC00173-203ENST00000480237 CLIP1P30622 1438 aa16.62■□□□□ 0.25
LINC00173-203ENST00000480237 MAGI1Q96QZ7 1491 aaPredicted RBP16.61■□□□□ 0.25
LINC00173-203ENST00000480237 FHAD1B1AJZ9 1412 aa16.61■□□□□ 0.25
LINC00173-203ENST00000480237 IQGAP2Q13576 1575 aa16.55■□□□□ 0.24
LINC00173-203ENST00000480237 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.55■□□□□ 0.24
LINC00173-203ENST00000480237 C1QBPQ07021 282 aaKnown RBP16.55■□□□□ 0.24
LINC00173-203ENST00000480237 HNRNPUL2Q1KMD3 747 aaKnown RBP16.55■□□□□ 0.24
LINC00173-203ENST00000480237 EFCAB5A4FU69 1503 aa16.53■□□□□ 0.24
LINC00173-203ENST00000480237 GRIN2AQ12879 1464 aa16.53■□□□□ 0.24
LINC00173-203ENST00000480237 SYNJ2O15056 1496 aa16.52■□□□□ 0.24
LINC00173-203ENST00000480237 RANGAP1P46060 587 aaPredicted RBP16.51■□□□□ 0.23
LINC00173-203ENST00000480237 SAMD9Q5K651 1589 aa16.51■□□□□ 0.23
LINC00173-203ENST00000480237 ARAP1Q96P48 1450 aa16.5■□□□□ 0.23
LINC00173-203ENST00000480237 ARHGAP35Q9NRY4 1499 aa16.49■□□□□ 0.23
LINC00173-203ENST00000480237 SAMD1Q6SPF0 538 aaPredicted RBP16.49■□□□□ 0.23
LINC00173-203ENST00000480237 CEP170Q5SW79 1584 aa16.49■□□□□ 0.23
LINC00173-203ENST00000480237 VPS8Q8N3P4 1428 aa16.47■□□□□ 0.23
LINC00173-203ENST00000480237 CFAP43Q8NDM7 1665 aa16.42■□□□□ 0.22
LINC00173-203ENST00000480237 LRRIQ1Q96JM4 1722 aa16.42■□□□□ 0.22
LINC00173-203ENST00000480237 PCF11O94913 1555 aaKnown RBP16.42■□□□□ 0.22
LINC00173-203ENST00000480237 KIAA0556O60303 1618 aa16.39■□□□□ 0.21
LINC00173-203ENST00000480237 UGGT2Q9NYU1 1516 aa16.39■□□□□ 0.21
LINC00173-203ENST00000480237 KIAA0586Q9BVV6 1533 aa16.38■□□□□ 0.21
LINC00173-203ENST00000480237 CACNB1Q02641 598 aaPredicted RBP16.38■□□□□ 0.21
LINC00173-203ENST00000480237 CHMP7Q8WUX9 453 aaPredicted RBP16.38■□□□□ 0.21
LINC00173-203ENST00000480237 APLP2Q06481 763 aa16.37■□□□□ 0.21
LINC00173-203ENST00000480237 NUP160Q12769 1436 aa16.36■□□□□ 0.21
LINC00173-203ENST00000480237 FHOD3Q2V2M9 1422 aa16.35■□□□□ 0.21
LINC00173-203ENST00000480237 FBLN2P98095 1184 aa16.35■□□□□ 0.21
LINC00173-203ENST00000480237 SPINK5Q9NQ38 1064 aaPredicted RBP16.34■□□□□ 0.21
LINC00173-203ENST00000480237 ATXN8OSP0DMR3 200 aa16.32■□□□□ 0.2
LINC00173-203ENST00000480237 SHROOM2Q13796 1616 aa16.32■□□□□ 0.2
LINC00173-203ENST00000480237 ATF5Q9Y2D1 282 aaPredicted RBP16.3■□□□□ 0.2
LINC00173-203ENST00000480237 TIAM1Q13009 1591 aa16.3■□□□□ 0.2
LINC00173-203ENST00000480237 FYCO1Q9BQS8 1478 aa16.3■□□□□ 0.2
LINC00173-203ENST00000480237 CAPN15O75808 1086 aa16.3■□□□□ 0.2
LINC00173-203ENST00000480237 HECW1Q76N89 1606 aa16.29■□□□□ 0.2
LINC00173-203ENST00000480237 FMN1Q68DA7 1419 aa16.28■□□□□ 0.2
LINC00173-203ENST00000480237 P3H3Q8IVL6 736 aa16.28■□□□□ 0.2
LINC00173-203ENST00000480237 DISP1Q96F81 1524 aa16.26■□□□□ 0.19
LINC00173-203ENST00000480237 CLASP1Q7Z460 1538 aa16.25■□□□□ 0.19
LINC00173-203ENST00000480237 RAPGEF6Q8TEU7 1601 aa16.25■□□□□ 0.19
LINC00173-203ENST00000480237 PPARGC1BQ86YN6 1023 aaKnown RBP16.25■□□□□ 0.19
LINC00173-203ENST00000480237 TRHP20396 242 aaPredicted RBP16.23■□□□□ 0.19
LINC00173-203ENST00000480237 MAP3K1Q13233 1512 aa16.23■□□□□ 0.19
LINC00173-203ENST00000480237 CASKIN1Q8WXD9 1431 aa16.22■□□□□ 0.19
LINC00173-203ENST00000480237 CARMIL2Q6F5E8 1435 aa16.2■□□□□ 0.18
LINC00173-203ENST00000480237 TTBK1Q5TCY1 1321 aaPredicted RBP16.19■□□□□ 0.18
LINC00173-203ENST00000480237 TRIM26Q12899 539 aaPredicted RBP16.17■□□□□ 0.18
LINC00173-203ENST00000480237 SUPT6HQ7KZ85 1726 aaKnown RBP16.16■□□□□ 0.18
LINC00173-203ENST00000480237 ZNF219Q9P2Y4 722 aaPredicted RBP16.16■□□□□ 0.18
LINC00173-203ENST00000480237 CCDC18Q5T9S5 1454 aa16.15■□□□□ 0.18
LINC00173-203ENST00000480237 PCGF6Q9BYE7 350 aa16.14■□□□□ 0.17
LINC00173-203ENST00000480237 JPH4Q96JJ6 628 aa16.13■□□□□ 0.17
LINC00173-203ENST00000480237 PRG4Q92954 1404 aaPredicted RBP16.12■□□□□ 0.17
LINC00173-203ENST00000480237 ERCC6L2Q5T890 1561 aa16.12■□□□□ 0.17
LINC00173-203ENST00000480237 ATP1B4Q9UN42 357 aaPredicted RBP16.12■□□□□ 0.17
LINC00173-203ENST00000480237 LRRC9Q6ZRR7 1453 aa16.12■□□□□ 0.17
LINC00173-203ENST00000480237 EHBP1L1Q8N3D4 1523 aa16.11■□□□□ 0.17
LINC00173-203ENST00000480237 ABCA8O94911 1581 aa16.1■□□□□ 0.17
LINC00173-203ENST00000480237 EPRSP07814 1512 aaKnown RBP16.09■□□□□ 0.17
LINC00173-203ENST00000480237 CDK13Q14004 1512 aaKnown RBP16.09■□□□□ 0.17
LINC00173-203ENST00000480237 NUP153P49790 1475 aaKnown RBP16.05■□□□□ 0.16
LINC00173-203ENST00000480237 PLB1Q6P1J6 1458 aa16.05■□□□□ 0.16
LINC00173-203ENST00000480237 ADCY10Q96PN6 1610 aa16.04■□□□□ 0.16
LINC00173-203ENST00000480237 KANK4Q5T7N3 995 aaPredicted RBP16.04■□□□□ 0.16
LINC00173-203ENST00000480237 MAGI3Q5TCQ9 1506 aa16.03■□□□□ 0.16
LINC00173-203ENST00000480237 ITSN2Q9NZM3 1697 aa16.02■□□□□ 0.16
LINC00173-203ENST00000480237 MTUS2Q5JR59 1369 aa16■□□□□ 0.15
LINC00173-203ENST00000480237 ABCB7O75027 752 aa16■□□□□ 0.15
LINC00173-203ENST00000480237 ZCCHC11Q5TAX3 1644 aaKnown RBP15.99■□□□□ 0.15
LINC00173-203ENST00000480237 PTPRGP23470 1445 aa15.98■□□□□ 0.15
LINC00173-203ENST00000480237 ABCC2Q92887 1545 aa15.97■□□□□ 0.15
LINC00173-203ENST00000480237 DSG3P32926 999 aa15.97■□□□□ 0.15
LINC00173-203ENST00000480237 CDC42BPAQ5VT25 1732 aa15.97■□□□□ 0.15
LINC00173-203ENST00000480237 KIF14Q15058 1648 aa15.96■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms