RNA–Protein interactions for RNA: ENST00000480004.1

CAPN9-204, Transcript of calpain 9, humanhuman

TSL 2

Gene CAPN9, Length 510 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-204ENST00000480004 PRDM2Q13029 1718 aa9.87□□□□□ -0.83
CAPN9-204ENST00000480004 AQRO60306 1485 aaKnown RBP eCLIP9.86□□□□□ -0.83
CAPN9-204ENST00000480004 RTN4Q9NQC3 1192 aaKnown RBP9.86□□□□□ -0.83
CAPN9-204ENST00000480004 TOP2AP11388 1531 aaKnown RBP9.84□□□□□ -0.83
CAPN9-204ENST00000480004 CHMP7Q8WUX9 453 aaPredicted RBP9.82□□□□□ -0.84
CAPN9-204ENST00000480004 DNMBPQ6XZF7 1577 aa9.81□□□□□ -0.84
CAPN9-204ENST00000480004 SYNJ1O43426 1573 aa9.8□□□□□ -0.84
CAPN9-204ENST00000480004 TARBP1Q13395 1621 aaKnown RBP9.8□□□□□ -0.84
CAPN9-204ENST00000480004 CLASP1Q7Z460 1538 aa9.79□□□□□ -0.84
CAPN9-204ENST00000480004 SPINK5Q9NQ38 1064 aaPredicted RBP9.79□□□□□ -0.84
CAPN9-204ENST00000480004 C1QBPQ07021 282 aaKnown RBP9.78□□□□□ -0.84
CAPN9-204ENST00000480004 ILDR1Q86SU0 546 aaPredicted RBP9.78□□□□□ -0.84
CAPN9-204ENST00000480004 MKRN4PQ13434 485 aaPredicted RBP9.76□□□□□ -0.85
CAPN9-204ENST00000480004 GAPVD1Q14C86 1478 aa9.76□□□□□ -0.85
CAPN9-204ENST00000480004 TDRD9Q8NDG6 1382 aaKnown RBP9.75□□□□□ -0.85
CAPN9-204ENST00000480004 WDR97A6NE52 1622 aa9.74□□□□□ -0.85
CAPN9-204ENST00000480004 SOGA1O94964 1423 aa9.74□□□□□ -0.85
CAPN9-204ENST00000480004 CCDC88BA6NC98 1476 aa9.74□□□□□ -0.85
CAPN9-204ENST00000480004 POLA1P09884 1462 aaPredicted RBP9.74□□□□□ -0.85
CAPN9-204ENST00000480004 SNAPC4Q5SXM2 1469 aa9.74□□□□□ -0.85
CAPN9-204ENST00000480004 MAGI1Q96QZ7 1491 aaPredicted RBP9.74□□□□□ -0.85
CAPN9-204ENST00000480004 POTEDQ86YR6 584 aa9.74□□□□□ -0.85
CAPN9-204ENST00000480004 CAPN15O75808 1086 aa9.73□□□□□ -0.85
CAPN9-204ENST00000480004 SPDYE4A6NLX3 237 aa9.72□□□□□ -0.85
CAPN9-204ENST00000480004 POLA2Q14181 598 aa9.71□□□□□ -0.86
CAPN9-204ENST00000480004 SYNJ2O15056 1496 aa9.71□□□□□ -0.86
CAPN9-204ENST00000480004 RAD54L2Q9Y4B4 1467 aa9.71□□□□□ -0.86
CAPN9-204ENST00000480004 GRIN2BQ13224 1484 aa9.7□□□□□ -0.86
CAPN9-204ENST00000480004 PROM2Q8N271 834 aa9.68□□□□□ -0.86
CAPN9-204ENST00000480004 FBXO3Q9UK99 471 aa9.65□□□□□ -0.86
CAPN9-204ENST00000480004 KDM4FA0A1W2PPD8 638 aa9.63□□□□□ -0.87
CAPN9-204ENST00000480004 ZBTB12Q9Y330 459 aaPredicted RBP9.63□□□□□ -0.87
CAPN9-204ENST00000480004 FGD5Q6ZNL6 1462 aa9.62□□□□□ -0.87
CAPN9-204ENST00000480004 NPM1P06748 294 aaKnown RBP eCLIP9.61□□□□□ -0.87
CAPN9-204ENST00000480004 FAM69CQ0P6D2 419 aa9.6□□□□□ -0.87
CAPN9-204ENST00000480004 KIF13AQ9H1H9 1805 aa9.59□□□□□ -0.87
CAPN9-204ENST00000480004 PBRM1Q86U86 1689 aa9.56□□□□□ -0.88
CAPN9-204ENST00000480004 CEP170Q5SW79 1584 aa9.56□□□□□ -0.88
CAPN9-204ENST00000480004 ERCC6L2Q5T890 1561 aa9.56□□□□□ -0.88
CAPN9-204ENST00000480004 ABCC10Q5T3U5 1492 aa9.56□□□□□ -0.88
CAPN9-204ENST00000480004 SLC24A1O60721 1099 aa9.56□□□□□ -0.88
CAPN9-204ENST00000480004 ABCB7O75027 752 aa9.56□□□□□ -0.88
CAPN9-204ENST00000480004 GRIN2AQ12879 1464 aa9.55□□□□□ -0.88
CAPN9-204ENST00000480004 NUP160Q12769 1436 aa9.54□□□□□ -0.88
CAPN9-204ENST00000480004 KDM6BO15054 1643 aa9.53□□□□□ -0.88
CAPN9-204ENST00000480004 CUX1P39880 1505 aa9.52□□□□□ -0.88
CAPN9-204ENST00000480004 ABCA10Q8WWZ4 1543 aa9.51□□□□□ -0.89
CAPN9-204ENST00000480004 DSG3P32926 999 aa9.51□□□□□ -0.89
CAPN9-204ENST00000480004 VASPP50552 380 aaPredicted RBP9.51□□□□□ -0.89
CAPN9-204ENST00000480004 SHROOM2Q13796 1616 aa9.51□□□□□ -0.89
CAPN9-204ENST00000480004 MAPKBP1O60336 1514 aa9.51□□□□□ -0.89
CAPN9-204ENST00000480004 JPH4Q96JJ6 628 aa9.5□□□□□ -0.89
CAPN9-204ENST00000480004 ABCA5Q8WWZ7 1642 aa9.49□□□□□ -0.89
CAPN9-204ENST00000480004 PRG4Q92954 1404 aaPredicted RBP9.49□□□□□ -0.89
CAPN9-204ENST00000480004 FBXO41Q8TF61 875 aa9.48□□□□□ -0.89
CAPN9-204ENST00000480004 DIP2BQ9P265 1576 aa9.48□□□□□ -0.89
CAPN9-204ENST00000480004 FHAD1B1AJZ9 1412 aa9.48□□□□□ -0.89
CAPN9-204ENST00000480004 ADAMTS12P58397 1594 aa9.46□□□□□ -0.9
CAPN9-204ENST00000480004 ADGRL1O94910 1474 aa9.44□□□□□ -0.9
CAPN9-204ENST00000480004 HECW2Q9P2P5 1572 aa9.43□□□□□ -0.9
CAPN9-204ENST00000480004 WRNQ14191 1432 aaPredicted RBP eCLIP9.43□□□□□ -0.9
CAPN9-204ENST00000480004 TSPOAP1O95153 1857 aa9.42□□□□□ -0.9
CAPN9-204ENST00000480004 SPDYE2BA6NHP3 402 aa9.4□□□□□ -0.9
CAPN9-204ENST00000480004 SPDYE6P0CI01 402 aa9.4□□□□□ -0.9
CAPN9-204ENST00000480004 SPDYE2Q495Y8 402 aa9.4□□□□□ -0.9
CAPN9-204ENST00000480004 IFNLR1Q8IU57 520 aaPredicted RBP9.4□□□□□ -0.9
CAPN9-204ENST00000480004 ERICH3Q5RHP9 1530 aa9.4□□□□□ -0.91
CAPN9-204ENST00000480004 ADCY10Q96PN6 1610 aa9.38□□□□□ -0.91
CAPN9-204ENST00000480004 ZNF692Q9BU19 519 aaPredicted RBP9.38□□□□□ -0.91
CAPN9-204ENST00000480004 SSUH2Q9Y2M2 353 aa9.38□□□□□ -0.91
CAPN9-204ENST00000480004 PLB1Q6P1J6 1458 aa9.34□□□□□ -0.91
CAPN9-204ENST00000480004 GLI2P10070 1586 aa9.33□□□□□ -0.92
CAPN9-204ENST00000480004 TOP2BQ02880 1626 aa9.33□□□□□ -0.92
CAPN9-204ENST00000480004 PTPRGP23470 1445 aa9.32□□□□□ -0.92
CAPN9-204ENST00000480004 RUSC2Q8N2Y8 1516 aa9.32□□□□□ -0.92
CAPN9-204ENST00000480004 STAG3Q9UJ98 1225 aa9.32□□□□□ -0.92
CAPN9-204ENST00000480004 TEX14Q8IWB6 1497 aa9.32□□□□□ -0.92
CAPN9-204ENST00000480004 LMTK3Q96Q04 1460 aa9.32□□□□□ -0.92
CAPN9-204ENST00000480004 KIAA0586Q9BVV6 1533 aa9.31□□□□□ -0.92
CAPN9-204ENST00000480004 ASXL2Q76L83 1435 aa9.31□□□□□ -0.92
CAPN9-204ENST00000480004 ABCC2Q92887 1545 aa9.3□□□□□ -0.92
CAPN9-204ENST00000480004 CACNB1Q02641 598 aaPredicted RBP9.28□□□□□ -0.92
CAPN9-204ENST00000480004 PPRC1Q5VV67 1664 aaKnown RBP9.28□□□□□ -0.92
CAPN9-204ENST00000480004 COL17A1Q9UMD9 1497 aaPredicted RBP9.28□□□□□ -0.92
CAPN9-204ENST00000480004 BIVM-ERCC5R4GMW8 1640 aa9.27□□□□□ -0.92
CAPN9-204ENST00000480004 CARMIL2Q6F5E8 1435 aa9.27□□□□□ -0.93
CAPN9-204ENST00000480004 TNIKQ9UKE5 1360 aa9.26□□□□□ -0.93
CAPN9-204ENST00000480004 SOCS7O14512 581 aa9.26□□□□□ -0.93
CAPN9-204ENST00000480004 TTBK1Q5TCY1 1321 aaPredicted RBP9.26□□□□□ -0.93
CAPN9-204ENST00000480004 UHRF1BP1LA0JNW5 1464 aa9.24□□□□□ -0.93
CAPN9-204ENST00000480004 PKD2Q13563 968 aa9.24□□□□□ -0.93
CAPN9-204ENST00000480004 EPRSP07814 1512 aaKnown RBP9.24□□□□□ -0.93
CAPN9-204ENST00000480004 MAP3K4Q9Y6R4 1608 aa9.23□□□□□ -0.93
CAPN9-204ENST00000480004 UACAQ9BZF9 1416 aa9.22□□□□□ -0.93
CAPN9-204ENST00000480004 SPOCK2Q92563 424 aa9.22□□□□□ -0.93
CAPN9-204ENST00000480004 CUL7Q14999 1698 aa9.2□□□□□ -0.94
CAPN9-204ENST00000480004 KLHL34Q8N239 644 aa9.2□□□□□ -0.94
CAPN9-204ENST00000480004 PLCD3Q8N3E9 789 aa9.19□□□□□ -0.94
CAPN9-204ENST00000480004 DISP3Q9P2K9 1392 aa9.19□□□□□ -0.94
CAPN9-204ENST00000480004 KDM5BQ9UGL1 1544 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms