RNA–Protein interactions for RNA: ENST00000480004.1

CAPN9-204, Transcript of calpain 9, humanhuman

TSL 2

Gene CAPN9, Length 510 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-204ENST00000480004 CHIC1Q5VXU3 224 aa16.13■□□□□ 0.17
CAPN9-204ENST00000480004 AEBP2Q6ZN18 517 aaPredicted RBP16.11■□□□□ 0.17
CAPN9-204ENST00000480004 PHF23Q9BUL5 403 aaPredicted RBP14.21□□□□□ -0.13
CAPN9-204ENST00000480004 SENP3Q9H4L4 574 aaPredicted RBP13.63□□□□□ -0.23
CAPN9-204ENST00000480004 PLPPR3Q6T4P5 718 aa13.27□□□□□ -0.29
CAPN9-204ENST00000480004 NISCHQ9Y2I1 1504 aa13.18□□□□□ -0.3
CAPN9-204ENST00000480004 FOXD1Q16676 465 aa12.58□□□□□ -0.4
CAPN9-204ENST00000480004 ABCC9O60706 1549 aa12.39□□□□□ -0.43
CAPN9-204ENST00000480004 ADRA2BP18089 450 aa12.39□□□□□ -0.43
CAPN9-204ENST00000480004 PPP6R1Q9UPN7 881 aa12.39□□□□□ -0.43
CAPN9-204ENST00000480004 CCDC180Q9P1Z9 1646 aa12□□□□□ -0.49
CAPN9-204ENST00000480004 DNAJC5BQ9UF47 199 aa11.98□□□□□ -0.49
CAPN9-204ENST00000480004 PIAS4Q8N2W9 510 aaPredicted RBP11.95□□□□□ -0.5
CAPN9-204ENST00000480004 KCNA4P22459 653 aa11.88□□□□□ -0.51
CAPN9-204ENST00000480004 PPP4R3CPQ6ZMV5 832 aa11.72□□□□□ -0.53
CAPN9-204ENST00000480004 RB1CC1Q8TDY2 1594 aa11.67□□□□□ -0.54
CAPN9-204ENST00000480004 NCBP3Q53F19 620 aaKnown RBP11.54□□□□□ -0.56
CAPN9-204ENST00000480004 NACADO15069 1562 aa11.5□□□□□ -0.57
CAPN9-204ENST00000480004 PABPN1Q86U42 306 aaKnown RBP eCLIP11.49□□□□□ -0.57
CAPN9-204ENST00000480004 MSH5O43196 834 aa11.48□□□□□ -0.57
CAPN9-204ENST00000480004 EHMT2Q96KQ7 1210 aa11.46□□□□□ -0.57
CAPN9-204ENST00000480004 DNAJC5Q9H3Z4 198 aa11.4□□□□□ -0.58
CAPN9-204ENST00000480004 SLC4A1APQ9BWU0 796 aaKnown RBP11.39□□□□□ -0.59
CAPN9-204ENST00000480004 SCAF1Q9H7N4 1312 aaKnown RBP11.37□□□□□ -0.59
CAPN9-204ENST00000480004 DCAF8L2P0C7V8 631 aa11.37□□□□□ -0.59
CAPN9-204ENST00000480004 NPM3O75607 178 aaKnown RBP11.36□□□□□ -0.59
CAPN9-204ENST00000480004 CNKSR2Q8WXI2 1034 aa11.33□□□□□ -0.6
CAPN9-204ENST00000480004 UNC13AQ9UPW8 1703 aa11.29□□□□□ -0.6
CAPN9-204ENST00000480004 BICRAQ9NZM4 1560 aa11.25□□□□□ -0.61
CAPN9-204ENST00000480004 CECR2Q9BXF3 1484 aa11.24□□□□□ -0.61
CAPN9-204ENST00000480004 MYO15BQ96JP2 1530 aa11.21□□□□□ -0.61
CAPN9-204ENST00000480004 CSRNP3Q8WYN3 585 aa11.2□□□□□ -0.62
CAPN9-204ENST00000480004 SHROOM4Q9ULL8 1493 aa11.18□□□□□ -0.62
CAPN9-204ENST00000480004 CC2D2AQ9P2K1 1620 aa11.17□□□□□ -0.62
CAPN9-204ENST00000480004 MAPK8IP2Q13387 824 aaPredicted RBP11.12□□□□□ -0.63
CAPN9-204ENST00000480004 EIF4G1Q04637 1599 aaKnown RBP11.05□□□□□ -0.64
CAPN9-204ENST00000480004 RNF216Q9NWF9 866 aaPredicted RBP11.03□□□□□ -0.64
CAPN9-204ENST00000480004 ZBTB22O15209 634 aa10.95□□□□□ -0.66
CAPN9-204ENST00000480004 DMRT2Q9Y5R5 561 aa10.94□□□□□ -0.66
CAPN9-204ENST00000480004 CUX2O14529 1486 aa10.92□□□□□ -0.66
CAPN9-204ENST00000480004 DCAF1Q9Y4B6 1507 aa10.89□□□□□ -0.67
CAPN9-204ENST00000480004 HOXD11P31277 338 aaPredicted RBP10.89□□□□□ -0.67
CAPN9-204ENST00000480004 SCRIBQ14160 1630 aa10.87□□□□□ -0.67
CAPN9-204ENST00000480004 FOXD4L1Q9NU39 408 aa10.85□□□□□ -0.67
CAPN9-204ENST00000480004 ZCCHC6Q5VYS8 1495 aaKnown RBP10.81□□□□□ -0.68
CAPN9-204ENST00000480004 ERCC6Q03468 1493 aa10.79□□□□□ -0.68
CAPN9-204ENST00000480004 TRIM41Q8WV44 630 aa10.7□□□□□ -0.7
CAPN9-204ENST00000480004 SLC4A2P04920 1241 aa10.64□□□□□ -0.71
CAPN9-204ENST00000480004 NCAPD3P42695 1498 aa10.61□□□□□ -0.71
CAPN9-204ENST00000480004 MYCNP04198 464 aaPredicted RBP10.51□□□□□ -0.73
CAPN9-204ENST00000480004 NESP48681 1621 aa10.5□□□□□ -0.73
CAPN9-204ENST00000480004 ATAD2BQ9ULI0 1458 aa10.49□□□□□ -0.73
CAPN9-204ENST00000480004 THOC2Q8NI27 1593 aaKnown RBP10.48□□□□□ -0.73
CAPN9-204ENST00000480004 ATXN8OSP0DMR3 200 aa10.47□□□□□ -0.73
CAPN9-204ENST00000480004 HMGXB3Q12766 1538 aa10.47□□□□□ -0.73
CAPN9-204ENST00000480004 SMARCA2P51531 1590 aa10.47□□□□□ -0.73
CAPN9-204ENST00000480004 LAMC3Q9Y6N6 1575 aa10.43□□□□□ -0.74
CAPN9-204ENST00000480004 PDS5BQ9NTI5 1447 aa10.42□□□□□ -0.74
CAPN9-204ENST00000480004 OSCARQ8IYS5 282 aa10.4□□□□□ -0.74
CAPN9-204ENST00000480004 BAZ1BQ9UIG0 1483 aaKnown RBP10.38□□□□□ -0.75
CAPN9-204ENST00000480004 DCAF8L1A6NGE4 600 aa10.36□□□□□ -0.75
CAPN9-204ENST00000480004 SMARCA4P51532 1647 aa10.35□□□□□ -0.75
CAPN9-204ENST00000480004 KIF21AQ7Z4S6 1674 aa10.34□□□□□ -0.75
CAPN9-204ENST00000480004 BAZ1AQ9NRL2 1556 aaPredicted RBP10.31□□□□□ -0.76
CAPN9-204ENST00000480004 MRC2Q9UBG0 1479 aa10.31□□□□□ -0.76
CAPN9-204ENST00000480004 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.31□□□□□ -0.76
CAPN9-204ENST00000480004 WDR62O43379 1518 aa10.28□□□□□ -0.76
CAPN9-204ENST00000480004 CADPSQ9ULU8 1353 aa10.27□□□□□ -0.76
CAPN9-204ENST00000480004 PEG3Q9GZU2 1588 aa10.27□□□□□ -0.76
CAPN9-204ENST00000480004 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.25□□□□□ -0.77
CAPN9-204ENST00000480004 HNRNPUL2Q1KMD3 747 aaKnown RBP10.25□□□□□ -0.77
CAPN9-204ENST00000480004 SAMD1Q6SPF0 538 aaPredicted RBP10.23□□□□□ -0.77
CAPN9-204ENST00000480004 U3KPZ7 1027 aaPredicted RBP10.23□□□□□ -0.77
CAPN9-204ENST00000480004 RIMBP3CA6NJZ7 1639 aa10.19□□□□□ -0.78
CAPN9-204ENST00000480004 RIMBP3BA6NNM3 1639 aa10.19□□□□□ -0.78
CAPN9-204ENST00000480004 RIMBP3Q9UFD9 1639 aa10.19□□□□□ -0.78
CAPN9-204ENST00000480004 CEP164Q9UPV0 1460 aa10.19□□□□□ -0.78
CAPN9-204ENST00000480004 TRHP20396 242 aaPredicted RBP10.19□□□□□ -0.78
CAPN9-204ENST00000480004 ATF5Q9Y2D1 282 aaPredicted RBP10.16□□□□□ -0.78
CAPN9-204ENST00000480004 CYB5RLQ6IPT4 315 aa10.15□□□□□ -0.78
CAPN9-204ENST00000480004 ARHGEF11O15085 1522 aa10.13□□□□□ -0.79
CAPN9-204ENST00000480004 FANCD2Q9BXW9 1451 aa10.13□□□□□ -0.79
CAPN9-204ENST00000480004 MROH2BQ7Z745 1585 aa10.11□□□□□ -0.79
CAPN9-204ENST00000480004 FKBP8Q14318 412 aa10.08□□□□□ -0.8
CAPN9-204ENST00000480004 CFTRP13569 1480 aa10.05□□□□□ -0.8
CAPN9-204ENST00000480004 APLP2Q06481 763 aa10.05□□□□□ -0.8
CAPN9-204ENST00000480004 URB2Q14146 1524 aaKnown RBP10.03□□□□□ -0.8
CAPN9-204ENST00000480004 IFT140Q96RY7 1462 aa10.02□□□□□ -0.81
CAPN9-204ENST00000480004 RSF1Q96T23 1441 aaPredicted RBP9.99□□□□□ -0.81
CAPN9-204ENST00000480004 ARAP1Q96P48 1450 aa9.98□□□□□ -0.81
CAPN9-204ENST00000480004 ZNF219Q9P2Y4 722 aaPredicted RBP9.98□□□□□ -0.81
CAPN9-204ENST00000480004 ZNF608Q9ULD9 1512 aaPredicted RBP9.97□□□□□ -0.81
CAPN9-204ENST00000480004 WIZO95785 1651 aa9.96□□□□□ -0.82
CAPN9-204ENST00000480004 FBLN2P98095 1184 aa9.94□□□□□ -0.82
CAPN9-204ENST00000480004 ABCC8Q09428 1581 aa9.92□□□□□ -0.82
CAPN9-204ENST00000480004 AMER1Q5JTC6 1135 aaPredicted RBP9.91□□□□□ -0.82
CAPN9-204ENST00000480004 EIF4G3O43432 1585 aaKnown RBP9.89□□□□□ -0.83
CAPN9-204ENST00000480004 CHD1O14646 1710 aa9.89□□□□□ -0.83
CAPN9-204ENST00000480004 TOPBP1Q92547 1522 aa9.88□□□□□ -0.83
CAPN9-204ENST00000480004 RNF39Q9H2S5 420 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms