RNA–Protein interactions for RNA: ENST00000479365.5

SSR1-206, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-206ENST00000479365 ABCC8Q09428 1581 aa13.22□□□□□ -0.29
SSR1-206ENST00000479365 RTN4Q9NQC3 1192 aaKnown RBP13.2□□□□□ -0.3
SSR1-206ENST00000479365 SUPT5HO00267 1087 aaKnown RBP13.18□□□□□ -0.3
SSR1-206ENST00000479365 OSCARQ8IYS5 282 aa13.18□□□□□ -0.3
SSR1-206ENST00000479365 TARBP1Q13395 1621 aaKnown RBP13.17□□□□□ -0.3
SSR1-206ENST00000479365 POLA1P09884 1462 aaPredicted RBP13.17□□□□□ -0.3
SSR1-206ENST00000479365 FBLN2P98095 1184 aa13.17□□□□□ -0.3
SSR1-206ENST00000479365 AMER1Q5JTC6 1135 aaPredicted RBP13.17□□□□□ -0.3
SSR1-206ENST00000479365 EIF4G3O43432 1585 aaKnown RBP13.16□□□□□ -0.3
SSR1-206ENST00000479365 ZBTB12Q9Y330 459 aaPredicted RBP13.16□□□□□ -0.3
SSR1-206ENST00000479365 AQRO60306 1485 aaKnown RBP eCLIP13.14□□□□□ -0.317e-15■■■■□ 23.4
SSR1-206ENST00000479365 RAD54L2Q9Y4B4 1467 aa13.14□□□□□ -0.31
SSR1-206ENST00000479365 CUX1P39880 1505 aa13.13□□□□□ -0.31
SSR1-206ENST00000479365 TRIM41Q8WV44 630 aa13.12□□□□□ -0.31
SSR1-206ENST00000479365 FGD5Q6ZNL6 1462 aa13.1□□□□□ -0.31
SSR1-206ENST00000479365 SOGA1O94964 1423 aa13.09□□□□□ -0.31
SSR1-206ENST00000479365 TDRD9Q8NDG6 1382 aaKnown RBP13.07□□□□□ -0.32
SSR1-206ENST00000479365 CHD1O14646 1710 aa13.02□□□□□ -0.32
SSR1-206ENST00000479365 FKBP8Q14318 412 aa13.02□□□□□ -0.33
SSR1-206ENST00000479365 RIMBP3CA6NJZ7 1639 aa13.02□□□□□ -0.33
SSR1-206ENST00000479365 RIMBP3BA6NNM3 1639 aa13.02□□□□□ -0.33
SSR1-206ENST00000479365 RIMBP3Q9UFD9 1639 aa13.02□□□□□ -0.33
SSR1-206ENST00000479365 ARHGEF11O15085 1522 aa13□□□□□ -0.33
SSR1-206ENST00000479365 SNAPC4Q5SXM2 1469 aa13□□□□□ -0.33
SSR1-206ENST00000479365 WDR97A6NE52 1622 aa12.99□□□□□ -0.33
SSR1-206ENST00000479365 GRIN2BQ13224 1484 aa12.97□□□□□ -0.33
SSR1-206ENST00000479365 ABCA10Q8WWZ4 1543 aa12.95□□□□□ -0.34
SSR1-206ENST00000479365 MAGI1Q96QZ7 1491 aaPredicted RBP12.94□□□□□ -0.34
SSR1-206ENST00000479365 SYNJ1O43426 1573 aa12.94□□□□□ -0.34
SSR1-206ENST00000479365 GAPVD1Q14C86 1478 aa12.93□□□□□ -0.34
SSR1-206ENST00000479365 ABCA5Q8WWZ7 1642 aa12.93□□□□□ -0.34
SSR1-206ENST00000479365 SPDYE4A6NLX3 237 aa12.92□□□□□ -0.34
SSR1-206ENST00000479365 WRNQ14191 1432 aaPredicted RBP eCLIP12.92□□□□□ -0.34
SSR1-206ENST00000479365 TOP2BQ02880 1626 aa12.91□□□□□ -0.34
SSR1-206ENST00000479365 BIVM-ERCC5R4GMW8 1640 aa12.91□□□□□ -0.34
SSR1-206ENST00000479365 SYNJ2O15056 1496 aa12.91□□□□□ -0.34
SSR1-206ENST00000479365 PBRM1Q86U86 1689 aa12.91□□□□□ -0.34
SSR1-206ENST00000479365 CLASP1Q7Z460 1538 aa12.91□□□□□ -0.34
SSR1-206ENST00000479365 CHMP7Q8WUX9 453 aaPredicted RBP12.9□□□□□ -0.34
SSR1-206ENST00000479365 ARAP1Q96P48 1450 aa12.9□□□□□ -0.34
SSR1-206ENST00000479365 CYB5RLQ6IPT4 315 aa12.87□□□□□ -0.35
SSR1-206ENST00000479365 SPDYE2BA6NHP3 402 aa12.84□□□□□ -0.35
SSR1-206ENST00000479365 SPDYE6P0CI01 402 aa12.84□□□□□ -0.35
SSR1-206ENST00000479365 SPDYE2Q495Y8 402 aa12.84□□□□□ -0.35
SSR1-206ENST00000479365 ZNF692Q9BU19 519 aaPredicted RBP12.83□□□□□ -0.36
SSR1-206ENST00000479365 ADAMTS12P58397 1594 aa12.82□□□□□ -0.36
SSR1-206ENST00000479365 GRIN2AQ12879 1464 aa12.81□□□□□ -0.36
SSR1-206ENST00000479365 FHAD1B1AJZ9 1412 aa12.78□□□□□ -0.36
SSR1-206ENST00000479365 ERICH3Q5RHP9 1530 aa12.78□□□□□ -0.36
SSR1-206ENST00000479365 CEP170Q5SW79 1584 aa12.77□□□□□ -0.36
SSR1-206ENST00000479365 RBM42Q9BTD8 480 aaKnown RBP12.77□□□□□ -0.37
SSR1-206ENST00000479365 SSUH2Q9Y2M2 353 aa12.77□□□□□ -0.37
SSR1-206ENST00000479365 NUP160Q12769 1436 aa12.77□□□□□ -0.37
SSR1-206ENST00000479365 ERCC6L2Q5T890 1561 aa12.74□□□□□ -0.37
SSR1-206ENST00000479365 SHROOM2Q13796 1616 aa12.7□□□□□ -0.38
SSR1-206ENST00000479365 PROM2Q8N271 834 aa12.69□□□□□ -0.38
SSR1-206ENST00000479365 IGF1RP08069 1367 aa12.67□□□□□ -0.38
SSR1-206ENST00000479365 KIF27Q86VH2 1401 aa12.65□□□□□ -0.38
SSR1-206ENST00000479365 AKT1S1Q96B36 256 aa12.65□□□□□ -0.38
SSR1-206ENST00000479365 RUSC2Q8N2Y8 1516 aa12.64□□□□□ -0.39
SSR1-206ENST00000479365 PRG4Q92954 1404 aaPredicted RBP12.62□□□□□ -0.39
SSR1-206ENST00000479365 JPH4Q96JJ6 628 aa12.61□□□□□ -0.39
SSR1-206ENST00000479365 CUL7Q14999 1698 aa12.6□□□□□ -0.39
SSR1-206ENST00000479365 KIAA0586Q9BVV6 1533 aa12.57□□□□□ -0.4
SSR1-206ENST00000479365 CARMIL1Q5VZK9 1371 aa12.56□□□□□ -0.4
SSR1-206ENST00000479365 REM2Q8IYK8 340 aaPredicted RBP12.56□□□□□ -0.4
SSR1-206ENST00000479365 ADCY10Q96PN6 1610 aa12.48□□□□□ -0.41
SSR1-206ENST00000479365 SPDYE1Q8NFV5 336 aaPredicted RBP12.46□□□□□ -0.41
SSR1-206ENST00000479365 IQGAP2Q13576 1575 aa12.46□□□□□ -0.42
SSR1-206ENST00000479365 RAPGEF2Q9Y4G8 1499 aa12.46□□□□□ -0.42
SSR1-206ENST00000479365 FBXO3Q9UK99 471 aa12.45□□□□□ -0.42
SSR1-206ENST00000479365 CLEC11AQ9Y240 323 aa12.45□□□□□ -0.42
SSR1-206ENST00000479365 PITPNM1O00562 1244 aa12.44□□□□□ -0.42
SSR1-206ENST00000479365 MAPKBP1O60336 1514 aa12.43□□□□□ -0.42
SSR1-206ENST00000479365 KIF13AQ9H1H9 1805 aa12.43□□□□□ -0.42
SSR1-206ENST00000479365 PTPRGP23470 1445 aa12.43□□□□□ -0.42
SSR1-206ENST00000479365 DISP1Q96F81 1524 aa12.42□□□□□ -0.42
SSR1-206ENST00000479365 TNIKQ9UKE5 1360 aa12.42□□□□□ -0.42
SSR1-206ENST00000479365 TTBK1Q5TCY1 1321 aaPredicted RBP12.41□□□□□ -0.42
SSR1-206ENST00000479365 CARMIL2Q6F5E8 1435 aa12.41□□□□□ -0.42
SSR1-206ENST00000479365 ABCC10Q5T3U5 1492 aa12.4□□□□□ -0.42
SSR1-206ENST00000479365 NPM1P06748 294 aaKnown RBP eCLIP12.4□□□□□ -0.42
SSR1-206ENST00000479365 STAG3Q9UJ98 1225 aa12.4□□□□□ -0.42
SSR1-206ENST00000479365 UGGT2Q9NYU1 1516 aa12.4□□□□□ -0.42
SSR1-206ENST00000479365 PRXQ9BXM0 1461 aa12.39□□□□□ -0.43
SSR1-206ENST00000479365 DIP2BQ9P265 1576 aa12.39□□□□□ -0.43
SSR1-206ENST00000479365 FAM69CQ0P6D2 419 aa12.38□□□□□ -0.43
SSR1-206ENST00000479365 ABCC2Q92887 1545 aa12.37□□□□□ -0.43
SSR1-206ENST00000479365 KIAA0556O60303 1618 aa12.36□□□□□ -0.43
SSR1-206ENST00000479365 UHRF1BP1LA0JNW5 1464 aa12.35□□□□□ -0.43
SSR1-206ENST00000479365 VASPP50552 380 aaPredicted RBP12.35□□□□□ -0.43
SSR1-206ENST00000479365 UACAQ9BZF9 1416 aa12.34□□□□□ -0.43
SSR1-206ENST00000479365 CTTNBP2Q8WZ74 1663 aa12.32□□□□□ -0.44
SSR1-206ENST00000479365 ASXL2Q76L83 1435 aa12.31□□□□□ -0.44
SSR1-206ENST00000479365 PRR29P0C7W0 189 aa12.31□□□□□ -0.44
SSR1-206ENST00000479365 KDM5BQ9UGL1 1544 aa12.3□□□□□ -0.44
SSR1-206ENST00000479365 PLB1Q6P1J6 1458 aa12.28□□□□□ -0.44
SSR1-206ENST00000479365 GOLGA3Q08378 1498 aa12.27□□□□□ -0.44
SSR1-206ENST00000479365 CHRDL2Q6WN34 429 aa12.27□□□□□ -0.45
SSR1-206ENST00000479365 ZCCHC11Q5TAX3 1644 aaKnown RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms