RNA–Protein interactions for RNA: ENST00000479239.1

LRRC47-203, Transcript of leucine rich repeat containing 47, humanhuman

TSL 3

Gene LRRC47, Length 434 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC47-203ENST00000479239 RUSC2Q8N2Y8 1516 aa9.9□□□□□ -0.82
LRRC47-203ENST00000479239 TOPBP1Q92547 1522 aa9.89□□□□□ -0.83
LRRC47-203ENST00000479239 AQRO60306 1485 aaKnown RBP eCLIP9.87□□□□□ -0.835e-6■■□□□ 14.3
LRRC47-203ENST00000479239 TARBP1Q13395 1621 aaKnown RBP9.87□□□□□ -0.83
LRRC47-203ENST00000479239 FGD5Q6ZNL6 1462 aa9.85□□□□□ -0.83
LRRC47-203ENST00000479239 DNMBPQ6XZF7 1577 aa9.85□□□□□ -0.83
LRRC47-203ENST00000479239 FBLN2P98095 1184 aa9.84□□□□□ -0.83
LRRC47-203ENST00000479239 KIF27Q86VH2 1401 aa9.83□□□□□ -0.84
LRRC47-203ENST00000479239 MYCNP04198 464 aaPredicted RBP9.83□□□□□ -0.84
LRRC47-203ENST00000479239 UBTFP17480 764 aaKnown RBP9.81□□□□□ -0.84
LRRC47-203ENST00000479239 POLA1P09884 1462 aaPredicted RBP9.8□□□□□ -0.84
LRRC47-203ENST00000479239 GAPVD1Q14C86 1478 aa9.8□□□□□ -0.84
LRRC47-203ENST00000479239 ATXN8OSP0DMR3 200 aa9.8□□□□□ -0.84
LRRC47-203ENST00000479239 RAD54L2Q9Y4B4 1467 aa9.79□□□□□ -0.84
LRRC47-203ENST00000479239 KIF13AQ9H1H9 1805 aa9.79□□□□□ -0.84
LRRC47-203ENST00000479239 KDM4FA0A1W2PPD8 638 aa9.78□□□□□ -0.84
LRRC47-203ENST00000479239 GOLGA3Q08378 1498 aa9.78□□□□□ -0.84
LRRC47-203ENST00000479239 SNAPC4Q5SXM2 1469 aa9.78□□□□□ -0.84
LRRC47-203ENST00000479239 IGF1RP08069 1367 aa9.76□□□□□ -0.85
LRRC47-203ENST00000479239 TNIKQ9UKE5 1360 aa9.76□□□□□ -0.85
LRRC47-203ENST00000479239 ABCA10Q8WWZ4 1543 aa9.76□□□□□ -0.85
LRRC47-203ENST00000479239 KIF21BO75037 1637 aa9.74□□□□□ -0.85
LRRC47-203ENST00000479239 PRXQ9BXM0 1461 aa9.73□□□□□ -0.85
LRRC47-203ENST00000479239 RAPGEF2Q9Y4G8 1499 aa9.73□□□□□ -0.85
LRRC47-203ENST00000479239 TDRD9Q8NDG6 1382 aaKnown RBP9.73□□□□□ -0.85
LRRC47-203ENST00000479239 MAGI1Q96QZ7 1491 aaPredicted RBP9.72□□□□□ -0.85
LRRC47-203ENST00000479239 ERCC6L2Q5T890 1561 aa9.71□□□□□ -0.85
LRRC47-203ENST00000479239 WDR97A6NE52 1622 aa9.71□□□□□ -0.85
LRRC47-203ENST00000479239 CARMIL1Q5VZK9 1371 aa9.71□□□□□ -0.86
LRRC47-203ENST00000479239 RTN4Q9NQC3 1192 aaKnown RBP9.7□□□□□ -0.86
LRRC47-203ENST00000479239 CEP162Q5TB80 1403 aa9.7□□□□□ -0.86
LRRC47-203ENST00000479239 SYNJ2O15056 1496 aa9.7□□□□□ -0.86
LRRC47-203ENST00000479239 ERICH3Q5RHP9 1530 aa9.7□□□□□ -0.86
LRRC47-203ENST00000479239 FKBP8Q14318 412 aa9.69□□□□□ -0.86
LRRC47-203ENST00000479239 CHMP7Q8WUX9 453 aaPredicted RBP9.69□□□□□ -0.86
LRRC47-203ENST00000479239 AMER1Q5JTC6 1135 aaPredicted RBP9.68□□□□□ -0.86
LRRC47-203ENST00000479239 RANGAP1P46060 587 aaPredicted RBP9.66□□□□□ -0.86
LRRC47-203ENST00000479239 GRIN2BQ13224 1484 aa9.66□□□□□ -0.86
LRRC47-203ENST00000479239 ABCA5Q8WWZ7 1642 aa9.64□□□□□ -0.87
LRRC47-203ENST00000479239 HECW2Q9P2P5 1572 aa9.64□□□□□ -0.87
LRRC47-203ENST00000479239 CLIP1P30622 1438 aa9.64□□□□□ -0.87
LRRC47-203ENST00000479239 KDM6BO15054 1643 aa9.64□□□□□ -0.87
LRRC47-203ENST00000479239 CEP170Q5SW79 1584 aa9.63□□□□□ -0.87
LRRC47-203ENST00000479239 PBRM1Q86U86 1689 aa9.62□□□□□ -0.87
LRRC47-203ENST00000479239 ABCC10Q5T3U5 1492 aa9.62□□□□□ -0.87
LRRC47-203ENST00000479239 DCAF8L1A6NGE4 600 aa9.61□□□□□ -0.87
LRRC47-203ENST00000479239 CUL7Q14999 1698 aa9.61□□□□□ -0.87
LRRC47-203ENST00000479239 DIP2BQ9P265 1576 aa9.6□□□□□ -0.87
LRRC47-203ENST00000479239 SHROOM2Q13796 1616 aa9.6□□□□□ -0.87
LRRC47-203ENST00000479239 FHAD1B1AJZ9 1412 aa9.58□□□□□ -0.88
LRRC47-203ENST00000479239 ADGRL1O94910 1474 aa9.58□□□□□ -0.88
LRRC47-203ENST00000479239 SLC24A1O60721 1099 aa9.57□□□□□ -0.88
LRRC47-203ENST00000479239 FAM69CQ0P6D2 419 aa9.57□□□□□ -0.88
LRRC47-203ENST00000479239 FBXO41Q8TF61 875 aa9.57□□□□□ -0.88
LRRC47-203ENST00000479239 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.57□□□□□ -0.881e-6■■□□□ 13.9
LRRC47-203ENST00000479239 MAPKBP1O60336 1514 aa9.56□□□□□ -0.88
LRRC47-203ENST00000479239 ATF5Q9Y2D1 282 aaPredicted RBP9.56□□□□□ -0.88
LRRC47-203ENST00000479239 NUP160Q12769 1436 aa9.56□□□□□ -0.88
LRRC47-203ENST00000479239 GRIN2AQ12879 1464 aa9.54□□□□□ -0.88
LRRC47-203ENST00000479239 VPS8Q8N3P4 1428 aa9.54□□□□□ -0.88
LRRC47-203ENST00000479239 TSPOAP1O95153 1857 aa9.53□□□□□ -0.88
LRRC47-203ENST00000479239 PPARGC1BQ86YN6 1023 aaKnown RBP9.53□□□□□ -0.88
LRRC47-203ENST00000479239 ADAMTS12P58397 1594 aa9.53□□□□□ -0.88
LRRC47-203ENST00000479239 APLP2Q06481 763 aa9.52□□□□□ -0.89
LRRC47-203ENST00000479239 TRIM26Q12899 539 aaPredicted RBP9.52□□□□□ -0.89
LRRC47-203ENST00000479239 PCGF6Q9BYE7 350 aa9.52□□□□□ -0.89
LRRC47-203ENST00000479239 ARHGAP35Q9NRY4 1499 aa9.52□□□□□ -0.89
LRRC47-203ENST00000479239 P3H3Q8IVL6 736 aa9.5□□□□□ -0.89
LRRC47-203ENST00000479239 LMTK3Q96Q04 1460 aa9.5□□□□□ -0.89
LRRC47-203ENST00000479239 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.49□□□□□ -0.89
LRRC47-203ENST00000479239 HNRNPUL2Q1KMD3 747 aaKnown RBP9.49□□□□□ -0.89
LRRC47-203ENST00000479239 ADCY10Q96PN6 1610 aa9.49□□□□□ -0.89
LRRC47-203ENST00000479239 SAMD1Q6SPF0 538 aaPredicted RBP9.48□□□□□ -0.89
LRRC47-203ENST00000479239 U3KPZ7 1027 aaPredicted RBP9.47□□□□□ -0.89
LRRC47-203ENST00000479239 TTBK1Q5TCY1 1321 aaPredicted RBP9.47□□□□□ -0.89
LRRC47-203ENST00000479239 EFCAB5A4FU69 1503 aa9.46□□□□□ -0.89
LRRC47-203ENST00000479239 PPRC1Q5VV67 1664 aaKnown RBP9.46□□□□□ -0.89
LRRC47-203ENST00000479239 PRG4Q92954 1404 aaPredicted RBP9.46□□□□□ -0.9
LRRC47-203ENST00000479239 FHOD3Q2V2M9 1422 aa9.45□□□□□ -0.9
LRRC47-203ENST00000479239 KIAA0586Q9BVV6 1533 aa9.45□□□□□ -0.9
LRRC47-203ENST00000479239 CTTNBP2Q8WZ74 1663 aa9.45□□□□□ -0.9
LRRC47-203ENST00000479239 IQGAP2Q13576 1575 aa9.43□□□□□ -0.9
LRRC47-203ENST00000479239 ATP1B4Q9UN42 357 aaPredicted RBP9.43□□□□□ -0.9
LRRC47-203ENST00000479239 SOCS7O14512 581 aa9.42□□□□□ -0.9
LRRC47-203ENST00000479239 COL17A1Q9UMD9 1497 aaPredicted RBP9.41□□□□□ -0.9
LRRC47-203ENST00000479239 FMN1Q68DA7 1419 aa9.41□□□□□ -0.9
LRRC47-203ENST00000479239 NPM1P06748 294 aaKnown RBP eCLIP9.41□□□□□ -0.9
LRRC47-203ENST00000479239 ILDR2Q71H61 639 aa9.41□□□□□ -0.9
LRRC47-203ENST00000479239 SAMD9Q5K651 1589 aa9.4□□□□□ -0.9
LRRC47-203ENST00000479239 UGGT2Q9NYU1 1516 aa9.4□□□□□ -0.91
LRRC47-203ENST00000479239 JPH4Q96JJ6 628 aa9.39□□□□□ -0.91
LRRC47-203ENST00000479239 CASKIN1Q8WXD9 1431 aa9.39□□□□□ -0.91
LRRC47-203ENST00000479239 KANK4Q5T7N3 995 aaPredicted RBP9.38□□□□□ -0.91
LRRC47-203ENST00000479239 GLI2P10070 1586 aa9.37□□□□□ -0.91
LRRC47-203ENST00000479239 FYCO1Q9BQS8 1478 aa9.36□□□□□ -0.91
LRRC47-203ENST00000479239 CARMIL2Q6F5E8 1435 aa9.36□□□□□ -0.91
LRRC47-203ENST00000479239 MAP3K1Q13233 1512 aa9.36□□□□□ -0.91
LRRC47-203ENST00000479239 DISP1Q96F81 1524 aa9.36□□□□□ -0.91
LRRC47-203ENST00000479239 PCF11O94913 1555 aaKnown RBP9.34□□□□□ -0.91
LRRC47-203ENST00000479239 CACNB1Q02641 598 aaPredicted RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms