RNA–Protein interactions for RNA: ENST00000478979.5

CCDC78-210, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,054 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-210ENST00000478979 DNAJC5BQ9UF47 199 aa20.49■□□□□ 0.87
CCDC78-210ENST00000478979 CCNB3Q8WWL7 1395 aa20.48■□□□□ 0.87
CCDC78-210ENST00000478979 CLSPNQ9HAW4 1339 aa20.46■□□□□ 0.87
CCDC78-210ENST00000478979 PRDM2Q13029 1718 aa20.46■□□□□ 0.87
CCDC78-210ENST00000478979 TSHZ2Q9NRE2 1034 aa20.45■□□□□ 0.86
CCDC78-210ENST00000478979 FHOD3Q2V2M9 1422 aa20.4■□□□□ 0.86
CCDC78-210ENST00000478979 RRBP1Q9P2E9 1410 aaKnown RBP20.39■□□□□ 0.86
CCDC78-210ENST00000478979 POLA1P09884 1462 aaPredicted RBP20.35■□□□□ 0.85
CCDC78-210ENST00000478979 TDRD9Q8NDG6 1382 aaKnown RBP20.35■□□□□ 0.85
CCDC78-210ENST00000478979 PHLDB1Q86UU1 1377 aa20.34■□□□□ 0.85
CCDC78-210ENST00000478979 RAB3GAP2Q9H2M9 1393 aa20.34■□□□□ 0.85
CCDC78-210ENST00000478979 TOPBP1Q92547 1522 aa20.33■□□□□ 0.84
CCDC78-210ENST00000478979 TIAM1Q13009 1591 aa20.31■□□□□ 0.84
CCDC78-210ENST00000478979 SIN3AQ96ST3 1273 aa20.29■□□□□ 0.84
CCDC78-210ENST00000478979 LRRC9Q6ZRR7 1453 aa20.28■□□□□ 0.84
CCDC78-210ENST00000478979 PCF11O94913 1555 aaKnown RBP20.27■□□□□ 0.83
CCDC78-210ENST00000478979 DNMBPQ6XZF7 1577 aa20.27■□□□□ 0.83
CCDC78-210ENST00000478979 ARID3CA6NKF2 412 aa20.26■□□□□ 0.83
CCDC78-210ENST00000478979 FHAD1B1AJZ9 1412 aa20.23■□□□□ 0.83
CCDC78-210ENST00000478979 HIRIP3Q9BW71 556 aaPredicted RBP20.22■□□□□ 0.83
CCDC78-210ENST00000478979 ABCA10Q8WWZ4 1543 aa20.21■□□□□ 0.83
CCDC78-210ENST00000478979 URB2Q14146 1524 aaKnown RBP20.2■□□□□ 0.82
CCDC78-210ENST00000478979 SETD5Q9C0A6 1442 aa20.18■□□□□ 0.82
CCDC78-210ENST00000478979 MTUS2Q5JR59 1369 aa20.12■□□□□ 0.81
CCDC78-210ENST00000478979 MAPKBP1O60336 1514 aa20.11■□□□□ 0.81
CCDC78-210ENST00000478979 KCNH8Q96L42 1107 aa20.11■□□□□ 0.81
CCDC78-210ENST00000478979 GAPVD1Q14C86 1478 aa20.09■□□□□ 0.81
CCDC78-210ENST00000478979 BCANQ96GW7 911 aa20.09■□□□□ 0.81
CCDC78-210ENST00000478979 DDX10Q13206 875 aaKnown RBP20.07■□□□□ 0.8
CCDC78-210ENST00000478979 CHIC2Q9UKJ5 165 aa20.06■□□□□ 0.8
CCDC78-210ENST00000478979 CASKIN1Q8WXD9 1431 aa20.06■□□□□ 0.8
CCDC78-210ENST00000478979 MAP3K1Q13233 1512 aa20.06■□□□□ 0.8
CCDC78-210ENST00000478979 CFAP43Q8NDM7 1665 aa20.06■□□□□ 0.8
CCDC78-210ENST00000478979 FYCO1Q9BQS8 1478 aa20.05■□□□□ 0.8
CCDC78-210ENST00000478979 PDS5BQ9NTI5 1447 aa20.05■□□□□ 0.8
CCDC78-210ENST00000478979 CTTNBP2Q8WZ74 1663 aa20.05■□□□□ 0.8
CCDC78-210ENST00000478979 CUL7Q14999 1698 aa20.04■□□□□ 0.8
CCDC78-210ENST00000478979 LAMC3Q9Y6N6 1575 aa20.04■□□□□ 0.8
CCDC78-210ENST00000478979 KIF21AQ7Z4S6 1674 aa20.03■□□□□ 0.8
CCDC78-210ENST00000478979 FMN1Q68DA7 1419 aa20.02■□□□□ 0.8
CCDC78-210ENST00000478979 WDR97A6NE52 1622 aa20.01■□□□□ 0.79
CCDC78-210ENST00000478979 EFCAB5A4FU69 1503 aa20.01■□□□□ 0.79
CCDC78-210ENST00000478979 AQRO60306 1485 aaKnown RBP eCLIP20■□□□□ 0.79
CCDC78-210ENST00000478979 RRP7BPQ9NSQ0 103 aa19.99■□□□□ 0.79
CCDC78-210ENST00000478979 FGD6Q6ZV73 1430 aa19.98■□□□□ 0.79
CCDC78-210ENST00000478979 FKBP8Q14318 412 aa19.97■□□□□ 0.79
CCDC78-210ENST00000478979 RBM19Q9Y4C8 960 aaKnown RBP19.96■□□□□ 0.79
CCDC78-210ENST00000478979 SNAPC4Q5SXM2 1469 aa19.96■□□□□ 0.79
CCDC78-210ENST00000478979 PTPRKQ15262 1439 aa19.95■□□□□ 0.78
CCDC78-210ENST00000478979 ABCA5Q8WWZ7 1642 aa19.94■□□□□ 0.78
CCDC78-210ENST00000478979 TRIM52Q96A61 297 aa19.91■□□□□ 0.78
CCDC78-210ENST00000478979 NCOA2Q15596 1464 aa19.91■□□□□ 0.78
CCDC78-210ENST00000478979 LRRIQ1Q96JM4 1722 aa19.9■□□□□ 0.78
CCDC78-210ENST00000478979 TONSLQ96HA7 1378 aa19.89■□□□□ 0.77
CCDC78-210ENST00000478979 CCDC18Q5T9S5 1454 aa19.89■□□□□ 0.77
CCDC78-210ENST00000478979 PPP1R15AO75807 674 aaPredicted RBP19.87■□□□□ 0.77
CCDC78-210ENST00000478979 FBLN2P98095 1184 aa19.86■□□□□ 0.77
CCDC78-210ENST00000478979 MYOM3Q5VTT5 1437 aa19.84■□□□□ 0.77
CCDC78-210ENST00000478979 FOXD1Q16676 465 aa19.84■□□□□ 0.77
CCDC78-210ENST00000478979 GRIN2BQ13224 1484 aa19.84■□□□□ 0.77
CCDC78-210ENST00000478979 SAMD9Q5K651 1589 aa19.84■□□□□ 0.77
CCDC78-210ENST00000478979 TARBP1Q13395 1621 aaKnown RBP19.82■□□□□ 0.76
CCDC78-210ENST00000478979 CDK13Q14004 1512 aaKnown RBP19.82■□□□□ 0.76
CCDC78-210ENST00000478979 MAGI3Q5TCQ9 1506 aa19.82■□□□□ 0.76
CCDC78-210ENST00000478979 ZNF608Q9ULD9 1512 aaPredicted RBP19.81■□□□□ 0.76
CCDC78-210ENST00000478979 MSH5O43196 834 aa19.79■□□□□ 0.76
CCDC78-210ENST00000478979 NEFLP07196 543 aa19.79■□□□□ 0.76
CCDC78-210ENST00000478979 NAIPQ13075 1403 aa19.78■□□□□ 0.76
CCDC78-210ENST00000478979 SUPT6HQ7KZ85 1726 aaKnown RBP19.77■□□□□ 0.76
CCDC78-210ENST00000478979 HFM1A2PYH4 1435 aa19.77■□□□□ 0.75
CCDC78-210ENST00000478979 PTPN23Q9H3S7 1636 aa19.76■□□□□ 0.75
CCDC78-210ENST00000478979 PBRM1Q86U86 1689 aa19.76■□□□□ 0.75
CCDC78-210ENST00000478979 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.75■□□□□ 0.75
CCDC78-210ENST00000478979 ZNF644Q9H582 1327 aaPredicted RBP19.74■□□□□ 0.75
CCDC78-210ENST00000478979 IQGAP2Q13576 1575 aa19.74■□□□□ 0.75
CCDC78-210ENST00000478979 UACAQ9BZF9 1416 aa19.74■□□□□ 0.75
CCDC78-210ENST00000478979 EHBP1L1Q8N3D4 1523 aa19.73■□□□□ 0.75
CCDC78-210ENST00000478979 MRC2Q9UBG0 1479 aa19.72■□□□□ 0.75
CCDC78-210ENST00000478979 ANP32CO43423 234 aa19.72■□□□□ 0.75
CCDC78-210ENST00000478979 EPRSP07814 1512 aaKnown RBP19.71■□□□□ 0.75
CCDC78-210ENST00000478979 ZNF777Q9ULD5 760 aaPredicted RBP19.71■□□□□ 0.75
CCDC78-210ENST00000478979 UGGT2Q9NYU1 1516 aa19.69■□□□□ 0.74
CCDC78-210ENST00000478979 TIMELESSQ9UNS1 1208 aa19.69■□□□□ 0.74
CCDC78-210ENST00000478979 THOC2Q8NI27 1593 aaKnown RBP19.68■□□□□ 0.74
CCDC78-210ENST00000478979 ADAMTS12P58397 1594 aa19.68■□□□□ 0.74
CCDC78-210ENST00000478979 CNGB1Q14028 1251 aaPredicted RBP19.67■□□□□ 0.74
CCDC78-210ENST00000478979 CHMP7Q8WUX9 453 aaPredicted RBP19.66■□□□□ 0.74
CCDC78-210ENST00000478979 HECW1Q76N89 1606 aa19.66■□□□□ 0.74
CCDC78-210ENST00000478979 PRKCSHP14314 528 aaPredicted RBP19.65■□□□□ 0.74
CCDC78-210ENST00000478979 KDM6BO15054 1643 aa19.65■□□□□ 0.74
CCDC78-210ENST00000478979 MPHOSPH9Q99550 1183 aa19.64■□□□□ 0.73
CCDC78-210ENST00000478979 ERCC6Q03468 1493 aa19.63■□□□□ 0.73
CCDC78-210ENST00000478979 ERICH6Q7L0X2 663 aa19.62■□□□□ 0.73
CCDC78-210ENST00000478979 FANCIQ9NVI1 1328 aa19.61■□□□□ 0.73
CCDC78-210ENST00000478979 HSPA5P11021 654 aaKnown RBP19.6■□□□□ 0.73
CCDC78-210ENST00000478979 L3MBTL2Q969R5 705 aa19.59■□□□□ 0.73
CCDC78-210ENST00000478979 WDR62O43379 1518 aa19.58■□□□□ 0.73
CCDC78-210ENST00000478979 ZNF326Q5BKZ1 582 aaKnown RBP19.57■□□□□ 0.72
CCDC78-210ENST00000478979 SLC4A1APQ9BWU0 796 aaKnown RBP19.57■□□□□ 0.72
CCDC78-210ENST00000478979 ARHGEF11O15085 1522 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 112.1 ms