RNA–Protein interactions for RNA: ENST00000478752.5

CLDN12-209, Transcript of claudin 12, humanhuman

TSL 3

Gene CLDN12, Length 693 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12-209ENST00000478752 PITPNM1O00562 1244 aa11.91□□□□□ -0.5
CLDN12-209ENST00000478752 FBLN2P98095 1184 aa11.91□□□□□ -0.5
CLDN12-209ENST00000478752 EVX2Q03828 476 aa11.9□□□□□ -0.5
CLDN12-209ENST00000478752 CEP164Q9UPV0 1460 aa11.89□□□□□ -0.51
CLDN12-209ENST00000478752 THOC2Q8NI27 1593 aaKnown RBP11.89□□□□□ -0.51
CLDN12-209ENST00000478752 SPDYE2BA6NHP3 402 aa11.85□□□□□ -0.51
CLDN12-209ENST00000478752 SUPT5HO00267 1087 aaKnown RBP11.85□□□□□ -0.51
CLDN12-209ENST00000478752 SPDYE6P0CI01 402 aa11.85□□□□□ -0.51
CLDN12-209ENST00000478752 SPDYE2Q495Y8 402 aa11.85□□□□□ -0.51
CLDN12-209ENST00000478752 KIF21AQ7Z4S6 1674 aa11.84□□□□□ -0.51
CLDN12-209ENST00000478752 WDR62O43379 1518 aa11.83□□□□□ -0.52
CLDN12-209ENST00000478752 EHMT2Q96KQ7 1210 aa11.82□□□□□ -0.52
CLDN12-209ENST00000478752 FXR2P51116 673 aaKnown RBP eCLIP11.79□□□□□ -0.52
CLDN12-209ENST00000478752 URB2Q14146 1524 aaKnown RBP11.79□□□□□ -0.52
CLDN12-209ENST00000478752 SSUH2Q9Y2M2 353 aa11.76□□□□□ -0.53
CLDN12-209ENST00000478752 ZNF692Q9BU19 519 aaPredicted RBP11.73□□□□□ -0.53
CLDN12-209ENST00000478752 ABCC8Q09428 1581 aa11.72□□□□□ -0.53
CLDN12-209ENST00000478752 TOPBP1Q92547 1522 aa11.7□□□□□ -0.54
CLDN12-209ENST00000478752 IFT140Q96RY7 1462 aa11.69□□□□□ -0.54
CLDN12-209ENST00000478752 CLEC11AQ9Y240 323 aa11.65□□□□□ -0.54
CLDN12-209ENST00000478752 SPDYE1Q8NFV5 336 aaPredicted RBP11.63□□□□□ -0.55
CLDN12-209ENST00000478752 ZNF608Q9ULD9 1512 aaPredicted RBP11.63□□□□□ -0.55
CLDN12-209ENST00000478752 SOGA1O94964 1423 aa11.62□□□□□ -0.55
CLDN12-209ENST00000478752 DNMBPQ6XZF7 1577 aa11.62□□□□□ -0.55
CLDN12-209ENST00000478752 AQRO60306 1485 aaKnown RBP eCLIP11.6□□□□□ -0.55
CLDN12-209ENST00000478752 TDRD9Q8NDG6 1382 aaKnown RBP11.59□□□□□ -0.55
CLDN12-209ENST00000478752 POLA1P09884 1462 aaPredicted RBP11.58□□□□□ -0.56
CLDN12-209ENST00000478752 RAD54L2Q9Y4B4 1467 aa11.58□□□□□ -0.56
CLDN12-209ENST00000478752 GABBR2O75899 941 aa11.58□□□□□ -0.56
CLDN12-209ENST00000478752 TRIM41Q8WV44 630 aa11.58□□□□□ -0.56
CLDN12-209ENST00000478752 PRDM2Q13029 1718 aa11.57□□□□□ -0.56
CLDN12-209ENST00000478752 PRKAR2AP13861 404 aaKnown RBP11.56□□□□□ -0.56
CLDN12-209ENST00000478752 FGD5Q6ZNL6 1462 aa11.53□□□□□ -0.56
CLDN12-209ENST00000478752 CUX1P39880 1505 aa11.53□□□□□ -0.56
CLDN12-209ENST00000478752 CHMP7Q8WUX9 453 aaPredicted RBP11.52□□□□□ -0.57
CLDN12-209ENST00000478752 TARBP1Q13395 1621 aaKnown RBP11.51□□□□□ -0.57
CLDN12-209ENST00000478752 CHADLQ6NUI6 762 aa11.5□□□□□ -0.57
CLDN12-209ENST00000478752 WRNQ14191 1432 aaPredicted RBP eCLIP11.47□□□□□ -0.57
CLDN12-209ENST00000478752 EIF4G3O43432 1585 aaKnown RBP11.46□□□□□ -0.57
CLDN12-209ENST00000478752 C19orf67A6NJJ6 358 aa11.46□□□□□ -0.57
CLDN12-209ENST00000478752 GRIN2BQ13224 1484 aa11.44□□□□□ -0.58
CLDN12-209ENST00000478752 CYB5RLQ6IPT4 315 aa11.44□□□□□ -0.58
CLDN12-209ENST00000478752 GAPVD1Q14C86 1478 aa11.44□□□□□ -0.58
CLDN12-209ENST00000478752 PRR29P0C7W0 189 aa11.43□□□□□ -0.58
CLDN12-209ENST00000478752 SNAPC4Q5SXM2 1469 aa11.43□□□□□ -0.58
CLDN12-209ENST00000478752 ABCA10Q8WWZ4 1543 aa11.42□□□□□ -0.58
CLDN12-209ENST00000478752 MAGI1Q96QZ7 1491 aaPredicted RBP11.4□□□□□ -0.58
CLDN12-209ENST00000478752 WDR97A6NE52 1622 aa11.39□□□□□ -0.59
CLDN12-209ENST00000478752 SYNJ2O15056 1496 aa11.38□□□□□ -0.59
CLDN12-209ENST00000478752 ARHGEF11O15085 1522 aa11.36□□□□□ -0.59
CLDN12-209ENST00000478752 TOP2BQ02880 1626 aa11.35□□□□□ -0.59
CLDN12-209ENST00000478752 SPDYE4A6NLX3 237 aa11.35□□□□□ -0.59
CLDN12-209ENST00000478752 SYNJ1O43426 1573 aa11.33□□□□□ -0.6
CLDN12-209ENST00000478752 FHAD1B1AJZ9 1412 aa11.32□□□□□ -0.6
CLDN12-209ENST00000478752 RIMBP3CA6NJZ7 1639 aa11.31□□□□□ -0.6
CLDN12-209ENST00000478752 RIMBP3BA6NNM3 1639 aa11.31□□□□□ -0.6
CLDN12-209ENST00000478752 RIMBP3Q9UFD9 1639 aa11.31□□□□□ -0.6
CLDN12-209ENST00000478752 POTEMA6NI47 508 aa11.3□□□□□ -0.6
CLDN12-209ENST00000478752 POTEIP0CG38 1075 aa11.3□□□□□ -0.6
CLDN12-209ENST00000478752 BIVM-ERCC5R4GMW8 1640 aa11.3□□□□□ -0.6
CLDN12-209ENST00000478752 IGF1RP08069 1367 aa11.28□□□□□ -0.6
CLDN12-209ENST00000478752 ABCA5Q8WWZ7 1642 aa11.28□□□□□ -0.6
CLDN12-209ENST00000478752 GRIN2AQ12879 1464 aa11.28□□□□□ -0.6
CLDN12-209ENST00000478752 FARP1Q9Y4F1 1045 aaPredicted RBP11.28□□□□□ -0.6
CLDN12-209ENST00000478752 CHD1O14646 1710 aa11.28□□□□□ -0.6
CLDN12-209ENST00000478752 CLASP1Q7Z460 1538 aa11.27□□□□□ -0.61
CLDN12-209ENST00000478752 JPH4Q96JJ6 628 aa11.27□□□□□ -0.61
CLDN12-209ENST00000478752 ARAP1Q96P48 1450 aa11.26□□□□□ -0.61
CLDN12-209ENST00000478752 ERICH3Q5RHP9 1530 aa11.26□□□□□ -0.61
CLDN12-209ENST00000478752 NUP160Q12769 1436 aa11.26□□□□□ -0.61
CLDN12-209ENST00000478752 KIF27Q86VH2 1401 aa11.26□□□□□ -0.61
CLDN12-209ENST00000478752 CREBZFQ9NS37 354 aa11.25□□□□□ -0.61
CLDN12-209ENST00000478752 POTEGQ6S5H5 508 aa11.24□□□□□ -0.61
CLDN12-209ENST00000478752 PBRM1Q86U86 1689 aa11.2□□□□□ -0.62
CLDN12-209ENST00000478752 CARMIL1Q5VZK9 1371 aa11.2□□□□□ -0.62
CLDN12-209ENST00000478752 ADAMTS12P58397 1594 aa11.2□□□□□ -0.62
CLDN12-209ENST00000478752 CD44P16070 742 aaKnown RBP11.19□□□□□ -0.62
CLDN12-209ENST00000478752 PRG4Q92954 1404 aaPredicted RBP11.18□□□□□ -0.62
CLDN12-209ENST00000478752 CEP170Q5SW79 1584 aa11.17□□□□□ -0.62
CLDN12-209ENST00000478752 STAG3Q9UJ98 1225 aa11.16□□□□□ -0.62
CLDN12-209ENST00000478752 KIAA0586Q9BVV6 1533 aa11.13□□□□□ -0.63
CLDN12-209ENST00000478752 PROM2Q8N271 834 aa11.12□□□□□ -0.63
CLDN12-209ENST00000478752 PCDH10Q9P2E7 1040 aa11.12□□□□□ -0.63
CLDN12-209ENST00000478752 ERCC6L2Q5T890 1561 aa11.11□□□□□ -0.63
CLDN12-209ENST00000478752 NPM1P06748 294 aaKnown RBP eCLIP11.11□□□□□ -0.63
CLDN12-209ENST00000478752 OTUD5Q96G74 571 aa11.1□□□□□ -0.63
CLDN12-209ENST00000478752 MNX1P50219 401 aaPredicted RBP11.09□□□□□ -0.63
CLDN12-209ENST00000478752 DCBLD2Q96PD2 775 aa11.09□□□□□ -0.63
CLDN12-209ENST00000478752 RUSC2Q8N2Y8 1516 aa11.09□□□□□ -0.63
CLDN12-209ENST00000478752 TTBK1Q5TCY1 1321 aaPredicted RBP11.07□□□□□ -0.64
CLDN12-209ENST00000478752 RAPGEF2Q9Y4G8 1499 aa11.06□□□□□ -0.64
CLDN12-209ENST00000478752 SHROOM2Q13796 1616 aa11.06□□□□□ -0.64
CLDN12-209ENST00000478752 PTPRGP23470 1445 aa11.06□□□□□ -0.64
CLDN12-209ENST00000478752 CUL7Q14999 1698 aa11.04□□□□□ -0.64
CLDN12-209ENST00000478752 CARMIL2Q6F5E8 1435 aa11.04□□□□□ -0.64
CLDN12-209ENST00000478752 ZRANB1Q9UGI0 708 aa11.04□□□□□ -0.64
CLDN12-209ENST00000478752 TNIKQ9UKE5 1360 aa11.03□□□□□ -0.64
CLDN12-209ENST00000478752 ZNF579Q8NAF0 562 aaKnown RBP11.02□□□□□ -0.65
CLDN12-209ENST00000478752 FAM69CQ0P6D2 419 aa11.01□□□□□ -0.65
CLDN12-209ENST00000478752 PRXQ9BXM0 1461 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms