RNA–Protein interactions for RNA: ENST00000476884.1

LEMD1-207, Transcript of LEM domain containing 1, humanhuman

TSL 1 (best)

Gene LEMD1, Length 717 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD1-207ENST00000476884 FANCD2Q9BXW9 1451 aa10.12□□□□□ -0.79
LEMD1-207ENST00000476884 CEP164Q9UPV0 1460 aa10.1□□□□□ -0.79
LEMD1-207ENST00000476884 CUX2O14529 1486 aa10.09□□□□□ -0.79
LEMD1-207ENST00000476884 MRC2Q9UBG0 1479 aa10.08□□□□□ -0.8
LEMD1-207ENST00000476884 CHRDL2Q6WN34 429 aa10.07□□□□□ -0.8
LEMD1-207ENST00000476884 WDR62O43379 1518 aa10.04□□□□□ -0.8
LEMD1-207ENST00000476884 PITPNM1O00562 1244 aa10.04□□□□□ -0.8
LEMD1-207ENST00000476884 SPDYE4A6NLX3 237 aa10.03□□□□□ -0.8
LEMD1-207ENST00000476884 URB2Q14146 1524 aaKnown RBP10.02□□□□□ -0.8
LEMD1-207ENST00000476884 POTEHQ6S545 545 aa10.01□□□□□ -0.81
LEMD1-207ENST00000476884 SPDYE1Q8NFV5 336 aaPredicted RBP9.97□□□□□ -0.81
LEMD1-207ENST00000476884 TOPBP1Q92547 1522 aa9.97□□□□□ -0.81
LEMD1-207ENST00000476884 DNMBPQ6XZF7 1577 aa9.97□□□□□ -0.81
LEMD1-207ENST00000476884 CLEC11AQ9Y240 323 aa9.96□□□□□ -0.82
LEMD1-207ENST00000476884 ABCC8Q09428 1581 aa9.93□□□□□ -0.82
LEMD1-207ENST00000476884 PIP4P2Q8N4L2 257 aa9.91□□□□□ -0.82
LEMD1-207ENST00000476884 FXR2P51116 673 aaKnown RBP eCLIP9.9□□□□□ -0.82
LEMD1-207ENST00000476884 CUX1P39880 1505 aa9.9□□□□□ -0.82
LEMD1-207ENST00000476884 IFT140Q96RY7 1462 aa9.88□□□□□ -0.83
LEMD1-207ENST00000476884 POLA1P09884 1462 aaPredicted RBP9.87□□□□□ -0.83
LEMD1-207ENST00000476884 FGD5Q6ZNL6 1462 aa9.87□□□□□ -0.83
LEMD1-207ENST00000476884 ZNF608Q9ULD9 1512 aaPredicted RBP9.87□□□□□ -0.83
LEMD1-207ENST00000476884 TARBP1Q13395 1621 aaKnown RBP9.85□□□□□ -0.83
LEMD1-207ENST00000476884 RAD54L2Q9Y4B4 1467 aa9.85□□□□□ -0.83
LEMD1-207ENST00000476884 SYNJ1O43426 1573 aa9.84□□□□□ -0.83
LEMD1-207ENST00000476884 FKBP8Q14318 412 aa9.84□□□□□ -0.83
LEMD1-207ENST00000476884 PROM2Q8N271 834 aa9.84□□□□□ -0.83
LEMD1-207ENST00000476884 EIF4G3O43432 1585 aaKnown RBP9.84□□□□□ -0.83
LEMD1-207ENST00000476884 SOGA1O94964 1423 aa9.83□□□□□ -0.84
LEMD1-207ENST00000476884 WRNQ14191 1432 aaPredicted RBP eCLIP9.83□□□□□ -0.84
LEMD1-207ENST00000476884 BIVM-ERCC5R4GMW8 1640 aa9.83□□□□□ -0.84
LEMD1-207ENST00000476884 PRR29P0C7W0 189 aa9.83□□□□□ -0.84
LEMD1-207ENST00000476884 TOP2BQ02880 1626 aa9.82□□□□□ -0.84
LEMD1-207ENST00000476884 AQRO60306 1485 aaKnown RBP eCLIP9.8□□□□□ -0.84
LEMD1-207ENST00000476884 WDR97A6NE52 1622 aa9.8□□□□□ -0.84
LEMD1-207ENST00000476884 TDRD9Q8NDG6 1382 aaKnown RBP9.79□□□□□ -0.84
LEMD1-207ENST00000476884 STAG3Q9UJ98 1225 aa9.79□□□□□ -0.84
LEMD1-207ENST00000476884 PRKAR2AP13861 404 aaKnown RBP9.78□□□□□ -0.84
LEMD1-207ENST00000476884 PBRM1Q86U86 1689 aa9.77□□□□□ -0.85
LEMD1-207ENST00000476884 CHADLQ6NUI6 762 aa9.76□□□□□ -0.85
LEMD1-207ENST00000476884 DNAJC5Q9H3Z4 198 aa9.76□□□□□ -0.85
LEMD1-207ENST00000476884 CHD1O14646 1710 aa9.76□□□□□ -0.85
LEMD1-207ENST00000476884 ABCA10Q8WWZ4 1543 aa9.75□□□□□ -0.85
LEMD1-207ENST00000476884 ABCA5Q8WWZ7 1642 aa9.74□□□□□ -0.85
LEMD1-207ENST00000476884 GAPVD1Q14C86 1478 aa9.72□□□□□ -0.85
LEMD1-207ENST00000476884 GRIN2BQ13224 1484 aa9.72□□□□□ -0.85
LEMD1-207ENST00000476884 SNAPC4Q5SXM2 1469 aa9.72□□□□□ -0.85
LEMD1-207ENST00000476884 MAGI1Q96QZ7 1491 aaPredicted RBP9.68□□□□□ -0.86
LEMD1-207ENST00000476884 CREBZFQ9NS37 354 aa9.68□□□□□ -0.86
LEMD1-207ENST00000476884 CHMP7Q8WUX9 453 aaPredicted RBP9.67□□□□□ -0.86
LEMD1-207ENST00000476884 HAX1O00165 279 aa9.65□□□□□ -0.86
LEMD1-207ENST00000476884 TRIM41Q8WV44 630 aa9.65□□□□□ -0.86
LEMD1-207ENST00000476884 SYNJ2O15056 1496 aa9.65□□□□□ -0.87
LEMD1-207ENST00000476884 ADAMTS12P58397 1594 aa9.64□□□□□ -0.87
LEMD1-207ENST00000476884 ERICH3Q5RHP9 1530 aa9.63□□□□□ -0.87
LEMD1-207ENST00000476884 FARP1Q9Y4F1 1045 aaPredicted RBP9.63□□□□□ -0.87
LEMD1-207ENST00000476884 KIF27Q86VH2 1401 aa9.63□□□□□ -0.87
LEMD1-207ENST00000476884 FHAD1B1AJZ9 1412 aa9.6□□□□□ -0.87
LEMD1-207ENST00000476884 EVX2Q03828 476 aa9.6□□□□□ -0.87
LEMD1-207ENST00000476884 RIMBP3CA6NJZ7 1639 aa9.59□□□□□ -0.87
LEMD1-207ENST00000476884 RIMBP3BA6NNM3 1639 aa9.59□□□□□ -0.87
LEMD1-207ENST00000476884 RIMBP3Q9UFD9 1639 aa9.59□□□□□ -0.87
LEMD1-207ENST00000476884 GRIN2AQ12879 1464 aa9.59□□□□□ -0.87
LEMD1-207ENST00000476884 CUL7Q14999 1698 aa9.58□□□□□ -0.88
LEMD1-207ENST00000476884 RUSC2Q8N2Y8 1516 aa9.58□□□□□ -0.88
LEMD1-207ENST00000476884 CLASP1Q7Z460 1538 aa9.57□□□□□ -0.88
LEMD1-207ENST00000476884 C19orf67A6NJJ6 358 aa9.57□□□□□ -0.88
LEMD1-207ENST00000476884 IGF1RP08069 1367 aa9.57□□□□□ -0.88
LEMD1-207ENST00000476884 CEP170Q5SW79 1584 aa9.56□□□□□ -0.88
LEMD1-207ENST00000476884 MNX1P50219 401 aaPredicted RBP9.56□□□□□ -0.88
LEMD1-207ENST00000476884 MIER1Q8N108 512 aa9.56□□□□□ -0.88
LEMD1-207ENST00000476884 ARHGEF11O15085 1522 aa9.56□□□□□ -0.88
LEMD1-207ENST00000476884 CARMIL1Q5VZK9 1371 aa9.52□□□□□ -0.88
LEMD1-207ENST00000476884 NUP160Q12769 1436 aa9.52□□□□□ -0.89
LEMD1-207ENST00000476884 FBXO3Q9UK99 471 aa9.52□□□□□ -0.89
LEMD1-207ENST00000476884 SP7Q8TDD2 431 aaPredicted RBP9.51□□□□□ -0.89
LEMD1-207ENST00000476884 FAM9AQ8IZU1 332 aaPredicted RBP9.49□□□□□ -0.89
LEMD1-207ENST00000476884 CD44P16070 742 aaKnown RBP9.48□□□□□ -0.89
LEMD1-207ENST00000476884 CYB5RLQ6IPT4 315 aa9.48□□□□□ -0.89
LEMD1-207ENST00000476884 PLCD3Q8N3E9 789 aa9.48□□□□□ -0.89
LEMD1-207ENST00000476884 ERCC6L2Q5T890 1561 aa9.48□□□□□ -0.89
LEMD1-207ENST00000476884 SHROOM2Q13796 1616 aa9.48□□□□□ -0.89
LEMD1-207ENST00000476884 ARAP1Q96P48 1450 aa9.47□□□□□ -0.89
LEMD1-207ENST00000476884 RAPGEF2Q9Y4G8 1499 aa9.47□□□□□ -0.89
LEMD1-207ENST00000476884 NPM1P06748 294 aaKnown RBP eCLIP9.47□□□□□ -0.89
LEMD1-207ENST00000476884 CTTNBP2Q8WZ74 1663 aa9.46□□□□□ -0.89
LEMD1-207ENST00000476884 PLEKHG5O94827 1062 aa9.45□□□□□ -0.9
LEMD1-207ENST00000476884 JPH4Q96JJ6 628 aa9.45□□□□□ -0.9
LEMD1-207ENST00000476884 KIAA0586Q9BVV6 1533 aa9.45□□□□□ -0.9
LEMD1-207ENST00000476884 PRG4Q92954 1404 aaPredicted RBP9.44□□□□□ -0.9
LEMD1-207ENST00000476884 IQGAP2Q13576 1575 aa9.43□□□□□ -0.9
LEMD1-207ENST00000476884 EEA1Q15075 1411 aa9.43□□□□□ -0.9
LEMD1-207ENST00000476884 PRXQ9BXM0 1461 aa9.42□□□□□ -0.9
LEMD1-207ENST00000476884 VASPP50552 380 aaPredicted RBP9.41□□□□□ -0.9
LEMD1-207ENST00000476884 TTBK1Q5TCY1 1321 aaPredicted RBP9.4□□□□□ -0.9
LEMD1-207ENST00000476884 ZRANB1Q9UGI0 708 aa9.4□□□□□ -0.9
LEMD1-207ENST00000476884 RTN4Q9NQC3 1192 aaKnown RBP9.39□□□□□ -0.91
LEMD1-207ENST00000476884 KIF21BO75037 1637 aa9.38□□□□□ -0.91
LEMD1-207ENST00000476884 GABBR2O75899 941 aa9.37□□□□□ -0.91
LEMD1-207ENST00000476884 ZBTB47Q9UFB7 747 aaPredicted RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms