RNA–Protein interactions for RNA: ENST00000476884.1

LEMD1-207, Transcript of LEM domain containing 1, humanhuman

TSL 1 (best)

Gene LEMD1, Length 717 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD1-207ENST00000476884 AEBP2Q6ZN18 517 aaPredicted RBP18.47■□□□□ 0.55
LEMD1-207ENST00000476884 CHIC1Q5VXU3 224 aa17.79■□□□□ 0.44
LEMD1-207ENST00000476884 PHF23Q9BUL5 403 aaPredicted RBP15.67■□□□□ 0.1
LEMD1-207ENST00000476884 SENP3Q9H4L4 574 aaPredicted RBP15.64■□□□□ 0.09
LEMD1-207ENST00000476884 FOXD1Q16676 465 aa14.6□□□□□ -0.07
LEMD1-207ENST00000476884 PLPPR3Q6T4P5 718 aa14.33□□□□□ -0.12
LEMD1-207ENST00000476884 PPP6R1Q9UPN7 881 aa13.92□□□□□ -0.18
LEMD1-207ENST00000476884 ADRA2BP18089 450 aa13.87□□□□□ -0.19
LEMD1-207ENST00000476884 PIAS4Q8N2W9 510 aaPredicted RBP13.68□□□□□ -0.22
LEMD1-207ENST00000476884 NISCHQ9Y2I1 1504 aa13.67□□□□□ -0.22
LEMD1-207ENST00000476884 MSH5O43196 834 aa13.49□□□□□ -0.25
LEMD1-207ENST00000476884 POTEDQ86YR6 584 aa12.71□□□□□ -0.37
LEMD1-207ENST00000476884 MAPK8IP2Q13387 824 aaPredicted RBP12.67□□□□□ -0.38
LEMD1-207ENST00000476884 PPP4R3CPQ6ZMV5 832 aa12.63□□□□□ -0.39
LEMD1-207ENST00000476884 SCAF1Q9H7N4 1312 aaKnown RBP12.62□□□□□ -0.39
LEMD1-207ENST00000476884 DMRT2Q9Y5R5 561 aa12.47□□□□□ -0.41
LEMD1-207ENST00000476884 CNKSR2Q8WXI2 1034 aa12.31□□□□□ -0.44
LEMD1-207ENST00000476884 NCBP3Q53F19 620 aaKnown RBP12.2□□□□□ -0.46
LEMD1-207ENST00000476884 CCDC180Q9P1Z9 1646 aa12.17□□□□□ -0.46
LEMD1-207ENST00000476884 HOXD11P31277 338 aaPredicted RBP12.14□□□□□ -0.47
LEMD1-207ENST00000476884 RNF216Q9NWF9 866 aaPredicted RBP12.12□□□□□ -0.47
LEMD1-207ENST00000476884 KCNA4P22459 653 aa12.1□□□□□ -0.47
LEMD1-207ENST00000476884 NPM3O75607 178 aaKnown RBP12.06□□□□□ -0.48
LEMD1-207ENST00000476884 DCAF8L1A6NGE4 600 aa11.94□□□□□ -0.5
LEMD1-207ENST00000476884 ABCC9O60706 1549 aa11.91□□□□□ -0.5
LEMD1-207ENST00000476884 DNAJC5BQ9UF47 199 aa11.71□□□□□ -0.53
LEMD1-207ENST00000476884 RNF39Q9H2S5 420 aa11.57□□□□□ -0.56
LEMD1-207ENST00000476884 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.55□□□□□ -0.56
LEMD1-207ENST00000476884 DCAF8L2P0C7V8 631 aa11.5□□□□□ -0.57
LEMD1-207ENST00000476884 SLC4A2P04920 1241 aa11.46□□□□□ -0.57
LEMD1-207ENST00000476884 SLC4A1APQ9BWU0 796 aaKnown RBP11.46□□□□□ -0.57
LEMD1-207ENST00000476884 RB1CC1Q8TDY2 1594 aa11.44□□□□□ -0.58
LEMD1-207ENST00000476884 CACNB1Q02641 598 aaPredicted RBP11.42□□□□□ -0.58
LEMD1-207ENST00000476884 NACADO15069 1562 aa11.41□□□□□ -0.58
LEMD1-207ENST00000476884 C1QBPQ07021 282 aaKnown RBP11.4□□□□□ -0.58
LEMD1-207ENST00000476884 ZCCHC6Q5VYS8 1495 aaKnown RBP11.38□□□□□ -0.59
LEMD1-207ENST00000476884 U3KPZ7 1027 aaPredicted RBP11.36□□□□□ -0.59
LEMD1-207ENST00000476884 MYO15BQ96JP2 1530 aa11.3□□□□□ -0.6
LEMD1-207ENST00000476884 DCAF1Q9Y4B6 1507 aa11.27□□□□□ -0.61
LEMD1-207ENST00000476884 UNC13AQ9UPW8 1703 aa11.26□□□□□ -0.61
LEMD1-207ENST00000476884 FOXD4L1Q9NU39 408 aa11.16□□□□□ -0.62
LEMD1-207ENST00000476884 ZBTB22O15209 634 aa11.15□□□□□ -0.62
LEMD1-207ENST00000476884 SCRIBQ14160 1630 aa11.15□□□□□ -0.62
LEMD1-207ENST00000476884 PABPN1Q86U42 306 aaKnown RBP eCLIP11.13□□□□□ -0.63
LEMD1-207ENST00000476884 SPINK5Q9NQ38 1064 aaPredicted RBP11.12□□□□□ -0.63
LEMD1-207ENST00000476884 MYCNP04198 464 aaPredicted RBP11.11□□□□□ -0.63
LEMD1-207ENST00000476884 BICRAQ9NZM4 1560 aa11.08□□□□□ -0.64
LEMD1-207ENST00000476884 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.08□□□□□ -0.64
LEMD1-207ENST00000476884 HNRNPUL2Q1KMD3 747 aaKnown RBP11.08□□□□□ -0.64
LEMD1-207ENST00000476884 CAPN15O75808 1086 aa11.06□□□□□ -0.64
LEMD1-207ENST00000476884 SAMD1Q6SPF0 538 aaPredicted RBP11.04□□□□□ -0.64
LEMD1-207ENST00000476884 APLP2Q06481 763 aa11.01□□□□□ -0.65
LEMD1-207ENST00000476884 TRHP20396 242 aaPredicted RBP10.97□□□□□ -0.65
LEMD1-207ENST00000476884 DSG3P32926 999 aa10.94□□□□□ -0.66
LEMD1-207ENST00000476884 ZNF219Q9P2Y4 722 aaPredicted RBP10.92□□□□□ -0.66
LEMD1-207ENST00000476884 SHROOM4Q9ULL8 1493 aa10.91□□□□□ -0.66
LEMD1-207ENST00000476884 CSRNP3Q8WYN3 585 aa10.9□□□□□ -0.66
LEMD1-207ENST00000476884 ATF5Q9Y2D1 282 aaPredicted RBP10.9□□□□□ -0.66
LEMD1-207ENST00000476884 EHMT2Q96KQ7 1210 aa10.89□□□□□ -0.67
LEMD1-207ENST00000476884 ABCB7O75027 752 aa10.85□□□□□ -0.67
LEMD1-207ENST00000476884 EIF4G1Q04637 1599 aaKnown RBP10.8□□□□□ -0.68
LEMD1-207ENST00000476884 ATXN8OSP0DMR3 200 aa10.79□□□□□ -0.68
LEMD1-207ENST00000476884 CC2D2AQ9P2K1 1620 aa10.77□□□□□ -0.68
LEMD1-207ENST00000476884 POLA2Q14181 598 aa10.75□□□□□ -0.69
LEMD1-207ENST00000476884 CECR2Q9BXF3 1484 aa10.68□□□□□ -0.7
LEMD1-207ENST00000476884 SMARCA4P51532 1647 aa10.63□□□□□ -0.71
LEMD1-207ENST00000476884 BAZ1AQ9NRL2 1556 aaPredicted RBP10.6□□□□□ -0.71
LEMD1-207ENST00000476884 MROH2BQ7Z745 1585 aa10.56□□□□□ -0.72
LEMD1-207ENST00000476884 ATAD2BQ9ULI0 1458 aa10.54□□□□□ -0.72
LEMD1-207ENST00000476884 SMARCA2P51531 1590 aa10.53□□□□□ -0.72
LEMD1-207ENST00000476884 NCAPD3P42695 1498 aa10.49□□□□□ -0.73
LEMD1-207ENST00000476884 ZBTB12Q9Y330 459 aaPredicted RBP10.49□□□□□ -0.73
LEMD1-207ENST00000476884 WIZO95785 1651 aa10.48□□□□□ -0.73
LEMD1-207ENST00000476884 BAZ1BQ9UIG0 1483 aaKnown RBP10.48□□□□□ -0.73
LEMD1-207ENST00000476884 PEG3Q9GZU2 1588 aa10.48□□□□□ -0.73
LEMD1-207ENST00000476884 HMGXB3Q12766 1538 aa10.47□□□□□ -0.73
LEMD1-207ENST00000476884 RSF1Q96T23 1441 aaPredicted RBP10.41□□□□□ -0.74
LEMD1-207ENST00000476884 MKRN4PQ13434 485 aaPredicted RBP10.4□□□□□ -0.74
LEMD1-207ENST00000476884 FBLN2P98095 1184 aa10.38□□□□□ -0.75
LEMD1-207ENST00000476884 OSCARQ8IYS5 282 aa10.37□□□□□ -0.75
LEMD1-207ENST00000476884 RBM42Q9BTD8 480 aaKnown RBP10.37□□□□□ -0.75
LEMD1-207ENST00000476884 TOP2AP11388 1531 aaKnown RBP10.33□□□□□ -0.76
LEMD1-207ENST00000476884 NESP48681 1621 aa10.3□□□□□ -0.76
LEMD1-207ENST00000476884 ERCC6Q03468 1493 aa10.27□□□□□ -0.77
LEMD1-207ENST00000476884 LAMC3Q9Y6N6 1575 aa10.26□□□□□ -0.77
LEMD1-207ENST00000476884 SUPT5HO00267 1087 aaKnown RBP10.25□□□□□ -0.77
LEMD1-207ENST00000476884 KIF21AQ7Z4S6 1674 aa10.23□□□□□ -0.77
LEMD1-207ENST00000476884 AKT1S1Q96B36 256 aa10.23□□□□□ -0.77
LEMD1-207ENST00000476884 SPDYE2BA6NHP3 402 aa10.22□□□□□ -0.77
LEMD1-207ENST00000476884 SPDYE6P0CI01 402 aa10.22□□□□□ -0.77
LEMD1-207ENST00000476884 SPDYE2Q495Y8 402 aa10.22□□□□□ -0.77
LEMD1-207ENST00000476884 CADPSQ9ULU8 1353 aa10.21□□□□□ -0.78
LEMD1-207ENST00000476884 CCDC88BA6NC98 1476 aa10.21□□□□□ -0.78
LEMD1-207ENST00000476884 PRDM2Q13029 1718 aa10.18□□□□□ -0.78
LEMD1-207ENST00000476884 PDS5BQ9NTI5 1447 aa10.17□□□□□ -0.78
LEMD1-207ENST00000476884 ZNF692Q9BU19 519 aaPredicted RBP10.17□□□□□ -0.78
LEMD1-207ENST00000476884 REM2Q8IYK8 340 aaPredicted RBP10.16□□□□□ -0.78
LEMD1-207ENST00000476884 CFTRP13569 1480 aa10.15□□□□□ -0.78
LEMD1-207ENST00000476884 THOC2Q8NI27 1593 aaKnown RBP10.14□□□□□ -0.79
LEMD1-207ENST00000476884 SSUH2Q9Y2M2 353 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms