RNA–Protein interactions for RNA: ENST00000475723.5

TTC19-206, Transcript of tetratricopeptide repeat domain 19, humanhuman

TSL 2

Gene TTC19, Length 2,591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC19-206ENST00000475723 DDX10Q13206 875 aaKnown RBP30.1■■■□□ 2.41
TTC19-206ENST00000475723 WDR97A6NE52 1622 aa30.1■■■□□ 2.41
TTC19-206ENST00000475723 RBM19Q9Y4C8 960 aaKnown RBP30.05■■■□□ 2.4
TTC19-206ENST00000475723 PPP1R15AO75807 674 aaPredicted RBP30.01■■■□□ 2.39
TTC19-206ENST00000475723 SETD5Q9C0A6 1442 aa30■■■□□ 2.39
TTC19-206ENST00000475723 NEFLP07196 543 aa30■■■□□ 2.39
TTC19-206ENST00000475723 DNAJC5BQ9UF47 199 aa29.96■■■□□ 2.39
TTC19-206ENST00000475723 SIN3AQ96ST3 1273 aa29.96■■■□□ 2.39
TTC19-206ENST00000475723 NESP48681 1621 aa29.95■■■□□ 2.38
TTC19-206ENST00000475723 FGD5Q6ZNL6 1462 aa29.94■■■□□ 2.38
TTC19-206ENST00000475723 TIAM1Q13009 1591 aa29.94■■■□□ 2.38
TTC19-206ENST00000475723 IGF1RP08069 1367 aa29.92■■■□□ 2.38
TTC19-206ENST00000475723 PRDM2Q13029 1718 aa29.91■■■□□ 2.38
TTC19-206ENST00000475723 CCER2I3L3R5 266 aa29.9■■■□□ 2.38
TTC19-206ENST00000475723 TRIM52Q96A61 297 aa29.9■■■□□ 2.38
TTC19-206ENST00000475723 MAP3K1Q13233 1512 aa29.89■■■□□ 2.38
TTC19-206ENST00000475723 FANCD2Q9BXW9 1451 aa29.88■■■□□ 2.37
TTC19-206ENST00000475723 PHLDB1Q86UU1 1377 aa29.83■■■□□ 2.37
TTC19-206ENST00000475723 HIRIP3Q9BW71 556 aaPredicted RBP29.82■■■□□ 2.36
TTC19-206ENST00000475723 LRRC9Q6ZRR7 1453 aa29.81■■■□□ 2.36
TTC19-206ENST00000475723 TIMELESSQ9UNS1 1208 aa29.81■■■□□ 2.36
TTC19-206ENST00000475723 ANP32CO43423 234 aa29.8■■■□□ 2.36
TTC19-206ENST00000475723 RAD54L2Q9Y4B4 1467 aa29.8■■■□□ 2.36
TTC19-206ENST00000475723 CARMIL1Q5VZK9 1371 aa29.78■■■□□ 2.36
TTC19-206ENST00000475723 MSH5O43196 834 aa29.75■■■□□ 2.35
TTC19-206ENST00000475723 FAM50AQ14320 339 aaKnown RBP29.74■■■□□ 2.35
TTC19-206ENST00000475723 P3H3Q8IVL6 736 aa29.74■■■□□ 2.35
TTC19-206ENST00000475723 CFAP43Q8NDM7 1665 aa29.66■■■□□ 2.34
TTC19-206ENST00000475723 TOPBP1Q92547 1522 aa29.63■■■□□ 2.33
TTC19-206ENST00000475723 POLA1P09884 1462 aaPredicted RBP29.62■■■□□ 2.33
TTC19-206ENST00000475723 FANCIQ9NVI1 1328 aa29.59■■■□□ 2.33
TTC19-206ENST00000475723 ATP1B4Q9UN42 357 aaPredicted RBP29.58■■■□□ 2.33
TTC19-206ENST00000475723 PCF11O94913 1555 aaKnown RBP29.57■■■□□ 2.32
TTC19-206ENST00000475723 DNMBPQ6XZF7 1577 aa29.57■■■□□ 2.32
TTC19-206ENST00000475723 FHAD1B1AJZ9 1412 aa29.55■■■□□ 2.32
TTC19-206ENST00000475723 TONSLQ96HA7 1378 aa29.51■■■□□ 2.31
TTC19-206ENST00000475723 URB2Q14146 1524 aaKnown RBP29.5■■■□□ 2.31
TTC19-206ENST00000475723 TDRD9Q8NDG6 1382 aaKnown RBP29.49■■■□□ 2.31
TTC19-206ENST00000475723 CDK11AQ9UQ88 783 aaPredicted RBP29.48■■■□□ 2.31
TTC19-206ENST00000475723 IRX6P78412 446 aaPredicted RBP29.48■■■□□ 2.31
TTC19-206ENST00000475723 HNRNPUQ00839 825 aaKnown RBP eCLIP29.47■■■□□ 2.31
TTC19-206ENST00000475723 ABCA10Q8WWZ4 1543 aa29.47■■■□□ 2.31
TTC19-206ENST00000475723 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.46■■■□□ 2.31
TTC19-206ENST00000475723 FHOD3Q2V2M9 1422 aa29.42■■■□□ 2.3
TTC19-206ENST00000475723 CCDC18Q5T9S5 1454 aa29.39■■■□□ 2.3
TTC19-206ENST00000475723 ERICH6Q7L0X2 663 aa29.39■■■□□ 2.29
TTC19-206ENST00000475723 FYCO1Q9BQS8 1478 aa29.36■■■□□ 2.29
TTC19-206ENST00000475723 LAMC3Q9Y6N6 1575 aa29.36■■■□□ 2.29
TTC19-206ENST00000475723 UACAQ9BZF9 1416 aa29.34■■■□□ 2.29
TTC19-206ENST00000475723 KDM5BQ9UGL1 1544 aa29.33■■■□□ 2.29
TTC19-206ENST00000475723 FGD6Q6ZV73 1430 aa29.32■■■□□ 2.28
TTC19-206ENST00000475723 ERICH6BQ5W0A0 696 aa29.3■■■□□ 2.28
TTC19-206ENST00000475723 CASKIN1Q8WXD9 1431 aa29.3■■■□□ 2.28
TTC19-206ENST00000475723 HFM1A2PYH4 1435 aa29.29■■■□□ 2.28
TTC19-206ENST00000475723 PTPN23Q9H3S7 1636 aa29.29■■■□□ 2.28
TTC19-206ENST00000475723 PTPRKQ15262 1439 aa29.28■■■□□ 2.28
TTC19-206ENST00000475723 PDS5BQ9NTI5 1447 aa29.28■■■□□ 2.28
TTC19-206ENST00000475723 PPP4R2Q9NY27 417 aa29.27■■■□□ 2.28
TTC19-206ENST00000475723 KIF21AQ7Z4S6 1674 aa29.26■■■□□ 2.27
TTC19-206ENST00000475723 AQRO60306 1485 aaKnown RBP eCLIP29.25■■■□□ 2.279e-7■■■■□ 21.9
TTC19-206ENST00000475723 WASHC2AQ641Q2 1341 aa29.24■■■□□ 2.27
TTC19-206ENST00000475723 EFCAB5A4FU69 1503 aa29.22■■■□□ 2.27
TTC19-206ENST00000475723 GAPVD1Q14C86 1478 aa29.2■■■□□ 2.27
TTC19-206ENST00000475723 NAIPQ13075 1403 aa29.19■■■□□ 2.26
TTC19-206ENST00000475723 HSPA5P11021 654 aaKnown RBP29.17■■■□□ 2.26
TTC19-206ENST00000475723 CCDC184Q52MB2 194 aa29.16■■■□□ 2.26
TTC19-206ENST00000475723 CUL7Q14999 1698 aa29.16■■■□□ 2.26
TTC19-206ENST00000475723 MYT1LQ9UL68 1186 aa29.15■■■□□ 2.26
TTC19-206ENST00000475723 NCOA2Q15596 1464 aa29.15■■■□□ 2.26
TTC19-206ENST00000475723 ABCA5Q8WWZ7 1642 aa29.12■■■□□ 2.25
TTC19-206ENST00000475723 CNTLNQ9NXG0 1405 aa29.11■■■□□ 2.25
TTC19-206ENST00000475723 B4GALNT3Q6L9W6 998 aa29.09■■■□□ 2.25
TTC19-206ENST00000475723 SNAPC4Q5SXM2 1469 aa29.09■■■□□ 2.25
TTC19-206ENST00000475723 MTUS2Q5JR59 1369 aa29.09■■■□□ 2.25
TTC19-206ENST00000475723 CTTNBP2Q8WZ74 1663 aa29.09■■■□□ 2.25
TTC19-206ENST00000475723 DEKP35659 375 aaKnown RBP29.07■■■□□ 2.24
TTC19-206ENST00000475723 FMN1Q68DA7 1419 aa29.06■■■□□ 2.24
TTC19-206ENST00000475723 MYOM3Q5VTT5 1437 aa29.03■■■□□ 2.24
TTC19-206ENST00000475723 EIF4G2P78344 907 aaKnown RBP eCLIP29.03■■■□□ 2.24
TTC19-206ENST00000475723 LRRIQ1Q96JM4 1722 aa29.02■■■□□ 2.24
TTC19-206ENST00000475723 ZBED9Q6R2W3 1325 aa29.02■■■□□ 2.24
TTC19-206ENST00000475723 FAM9BQ8IZU0 186 aa29.01■■■□□ 2.23
TTC19-206ENST00000475723 PRKRIP1Q9H875 184 aaPredicted RBP29.01■■■□□ 2.23
TTC19-206ENST00000475723 TARBP1Q13395 1621 aaKnown RBP29■■■□□ 2.23
TTC19-206ENST00000475723 DENND4BO75064 1496 aaPredicted RBP29■■■□□ 2.23
TTC19-206ENST00000475723 ARID3CA6NKF2 412 aa28.99■■■□□ 2.23
TTC19-206ENST00000475723 MRS2Q9HD23 443 aa28.96■■■□□ 2.23
TTC19-206ENST00000475723 HECW1Q76N89 1606 aa28.96■■■□□ 2.23
TTC19-206ENST00000475723 C11orf95C9JLR9 678 aaPredicted RBP28.96■■■□□ 2.23
TTC19-206ENST00000475723 NCOA1Q15788 1441 aa28.95■■■□□ 2.23
TTC19-206ENST00000475723 NOP58Q9Y2X3 529 aaKnown RBP28.95■■■□□ 2.23
TTC19-206ENST00000475723 CCDC7Q96M83 1385 aa28.94■■■□□ 2.22
TTC19-206ENST00000475723 SUPT6HQ7KZ85 1726 aaKnown RBP28.93■■■□□ 2.22
TTC19-206ENST00000475723 GCC2Q8IWJ2 1684 aa28.91■■■□□ 2.22
TTC19-206ENST00000475723 RRP7BPQ9NSQ0 103 aa28.91■■■□□ 2.22
TTC19-206ENST00000475723 PAK3O75914 559 aaPredicted RBP28.89■■■□□ 2.22
TTC19-206ENST00000475723 ZNF608Q9ULD9 1512 aaPredicted RBP28.88■■■□□ 2.21
TTC19-206ENST00000475723 GRIN2BQ13224 1484 aa28.87■■■□□ 2.21
TTC19-206ENST00000475723 EHBP1L1Q8N3D4 1523 aa28.87■■■□□ 2.21
TTC19-206ENST00000475723 SAMD9Q5K651 1589 aa28.86■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms