RNA–Protein interactions for RNA: ENST00000475302.1

ITGA6-210, Transcript of integrin subunit alpha 6, humanhuman

TSL 3

Gene ITGA6, Length 577 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-210ENST00000475302 EEA1Q15075 1411 aa15.86■□□□□ 0.13
ITGA6-210ENST00000475302 FAM9AQ8IZU1 332 aaPredicted RBP15.85■□□□□ 0.13
ITGA6-210ENST00000475302 PDS5BQ9NTI5 1447 aa15.79■□□□□ 0.12
ITGA6-210ENST00000475302 DNMBPQ6XZF7 1577 aa15.78■□□□□ 0.12
ITGA6-210ENST00000475302 CEP164Q9UPV0 1460 aa15.77■□□□□ 0.11
ITGA6-210ENST00000475302 TOPBP1Q92547 1522 aa15.76■□□□□ 0.11
ITGA6-210ENST00000475302 URB2Q14146 1524 aaKnown RBP15.74■□□□□ 0.11
ITGA6-210ENST00000475302 FGD5Q6ZNL6 1462 aa15.74■□□□□ 0.11
ITGA6-210ENST00000475302 KIF21AQ7Z4S6 1674 aa15.73■□□□□ 0.11
ITGA6-210ENST00000475302 SPDYE2BA6NHP3 402 aa15.69■□□□□ 0.1
ITGA6-210ENST00000475302 SPDYE6P0CI01 402 aa15.69■□□□□ 0.1
ITGA6-210ENST00000475302 SPDYE2Q495Y8 402 aa15.69■□□□□ 0.1
ITGA6-210ENST00000475302 AKT1S1Q96B36 256 aa15.68■□□□□ 0.1
ITGA6-210ENST00000475302 KIF21BO75037 1637 aa15.68■□□□□ 0.1
ITGA6-210ENST00000475302 POLA1P09884 1462 aaPredicted RBP15.67■□□□□ 0.1
ITGA6-210ENST00000475302 KIF27Q86VH2 1401 aa15.66■□□□□ 0.1
ITGA6-210ENST00000475302 PRXQ9BXM0 1461 aa15.65■□□□□ 0.1
ITGA6-210ENST00000475302 ABCA10Q8WWZ4 1543 aa15.63■□□□□ 0.09
ITGA6-210ENST00000475302 TNIKQ9UKE5 1360 aa15.62■□□□□ 0.09
ITGA6-210ENST00000475302 GOLGA3Q08378 1498 aa15.62■□□□□ 0.09
ITGA6-210ENST00000475302 RAD54L2Q9Y4B4 1467 aa15.62■□□□□ 0.09
ITGA6-210ENST00000475302 CUX2O14529 1486 aa15.61■□□□□ 0.09
ITGA6-210ENST00000475302 MRC2Q9UBG0 1479 aa15.61■□□□□ 0.09
ITGA6-210ENST00000475302 ZNF692Q9BU19 519 aaPredicted RBP15.61■□□□□ 0.09
ITGA6-210ENST00000475302 IGF1RP08069 1367 aa15.6■□□□□ 0.09
ITGA6-210ENST00000475302 WDR97A6NE52 1622 aa15.59■□□□□ 0.09
ITGA6-210ENST00000475302 REM2Q8IYK8 340 aaPredicted RBP15.58■□□□□ 0.08
ITGA6-210ENST00000475302 RAPGEF2Q9Y4G8 1499 aa15.58■□□□□ 0.08
ITGA6-210ENST00000475302 WDR62O43379 1518 aa15.58■□□□□ 0.08
ITGA6-210ENST00000475302 ERICH3Q5RHP9 1530 aa15.58■□□□□ 0.08
ITGA6-210ENST00000475302 SSUH2Q9Y2M2 353 aa15.57■□□□□ 0.08
ITGA6-210ENST00000475302 TARBP1Q13395 1621 aaKnown RBP15.55■□□□□ 0.08
ITGA6-210ENST00000475302 THOC2Q8NI27 1593 aaKnown RBP15.51■□□□□ 0.07
ITGA6-210ENST00000475302 ABCA5Q8WWZ7 1642 aa15.5■□□□□ 0.07
ITGA6-210ENST00000475302 CEP162Q5TB80 1403 aa15.49■□□□□ 0.07
ITGA6-210ENST00000475302 UBTFP17480 764 aaKnown RBP15.46■□□□□ 0.07
ITGA6-210ENST00000475302 CARMIL1Q5VZK9 1371 aa15.46■□□□□ 0.07
ITGA6-210ENST00000475302 SPDYE4A6NLX3 237 aa15.45■□□□□ 0.06
ITGA6-210ENST00000475302 ERCC6Q03468 1493 aa15.45■□□□□ 0.06
ITGA6-210ENST00000475302 CHRDL2Q6WN34 429 aa15.44■□□□□ 0.06
ITGA6-210ENST00000475302 TDRD9Q8NDG6 1382 aaKnown RBP15.44■□□□□ 0.06
ITGA6-210ENST00000475302 PITPNM1O00562 1244 aa15.43■□□□□ 0.06
ITGA6-210ENST00000475302 GAPVD1Q14C86 1478 aa15.43■□□□□ 0.06
ITGA6-210ENST00000475302 IFT140Q96RY7 1462 aa15.43■□□□□ 0.06
ITGA6-210ENST00000475302 CUL7Q14999 1698 aa15.4■□□□□ 0.06
ITGA6-210ENST00000475302 CLIP1P30622 1438 aa15.36■□□□□ 0.05
ITGA6-210ENST00000475302 ZNF608Q9ULD9 1512 aaPredicted RBP15.36■□□□□ 0.05
ITGA6-210ENST00000475302 AQRO60306 1485 aaKnown RBP eCLIP15.35■□□□□ 0.05
ITGA6-210ENST00000475302 PBRM1Q86U86 1689 aa15.32■□□□□ 0.04
ITGA6-210ENST00000475302 GRIN2BQ13224 1484 aa15.31■□□□□ 0.04
ITGA6-210ENST00000475302 POTEHQ6S545 545 aa15.3■□□□□ 0.04
ITGA6-210ENST00000475302 SPDYE1Q8NFV5 336 aaPredicted RBP15.3■□□□□ 0.04
ITGA6-210ENST00000475302 CLEC11AQ9Y240 323 aa15.3■□□□□ 0.04
ITGA6-210ENST00000475302 ADAMTS12P58397 1594 aa15.28■□□□□ 0.04
ITGA6-210ENST00000475302 ARAP1Q96P48 1450 aa15.27■□□□□ 0.04
ITGA6-210ENST00000475302 ARHGAP35Q9NRY4 1499 aa15.27■□□□□ 0.04
ITGA6-210ENST00000475302 FHAD1B1AJZ9 1412 aa15.27■□□□□ 0.04
ITGA6-210ENST00000475302 EIF4G3O43432 1585 aaKnown RBP15.27■□□□□ 0.03
ITGA6-210ENST00000475302 VPS8Q8N3P4 1428 aa15.26■□□□□ 0.03
ITGA6-210ENST00000475302 CTTNBP2Q8WZ74 1663 aa15.21■□□□□ 0.03
ITGA6-210ENST00000475302 FKBP8Q14318 412 aa15.2■□□□□ 0.02
ITGA6-210ENST00000475302 PIP4P2Q8N4L2 257 aa15.2■□□□□ 0.02
ITGA6-210ENST00000475302 SNAPC4Q5SXM2 1469 aa15.19■□□□□ 0.02
ITGA6-210ENST00000475302 MAGI1Q96QZ7 1491 aaPredicted RBP15.19■□□□□ 0.02
ITGA6-210ENST00000475302 FXR2P51116 673 aaKnown RBP eCLIP15.17■□□□□ 0.02
ITGA6-210ENST00000475302 TRIM26Q12899 539 aaPredicted RBP15.17■□□□□ 0.02
ITGA6-210ENST00000475302 EFCAB5A4FU69 1503 aa15.15■□□□□ 0.02
ITGA6-210ENST00000475302 RANGAP1P46060 587 aaPredicted RBP15.14■□□□□ 0.01
ITGA6-210ENST00000475302 PROM2Q8N271 834 aa15.14■□□□□ 0.01
ITGA6-210ENST00000475302 SAMD9Q5K651 1589 aa15.14■□□□□ 0.01
ITGA6-210ENST00000475302 GRIN2AQ12879 1464 aa15.14■□□□□ 0.01
ITGA6-210ENST00000475302 SYNJ2O15056 1496 aa15.13■□□□□ 0.01
ITGA6-210ENST00000475302 PCGF6Q9BYE7 350 aa15.12■□□□□ 0.01
ITGA6-210ENST00000475302 KIAA0586Q9BVV6 1533 aa15.09■□□□□ 0.01
ITGA6-210ENST00000475302 PRR29P0C7W0 189 aa15.09■□□□□ 0.01
ITGA6-210ENST00000475302 PPARGC1BQ86YN6 1023 aaKnown RBP15.08■□□□□ 0
ITGA6-210ENST00000475302 NUP160Q12769 1436 aa15.08■□□□□ 0
ITGA6-210ENST00000475302 UGGT2Q9NYU1 1516 aa15.07■□□□□ 0
ITGA6-210ENST00000475302 IQGAP2Q13576 1575 aa15.07■□□□□ 0
ITGA6-210ENST00000475302 MAP3K1Q13233 1512 aa15.06■□□□□ 0
ITGA6-210ENST00000475302 FHOD3Q2V2M9 1422 aa15.05■□□□□ -0
ITGA6-210ENST00000475302 CEP170Q5SW79 1584 aa15.05■□□□□ -0
ITGA6-210ENST00000475302 PRKAR2AP13861 404 aaKnown RBP15.02■□□□□ -0
ITGA6-210ENST00000475302 CASKIN1Q8WXD9 1431 aa15.01□□□□□ -0.01
ITGA6-210ENST00000475302 CHADLQ6NUI6 762 aa15.01□□□□□ -0.01
ITGA6-210ENST00000475302 CHMP7Q8WUX9 453 aaPredicted RBP15.01□□□□□ -0.01
ITGA6-210ENST00000475302 STAG3Q9UJ98 1225 aa15.01□□□□□ -0.01
ITGA6-210ENST00000475302 P3H3Q8IVL6 736 aa15□□□□□ -0.01
ITGA6-210ENST00000475302 DISP1Q96F81 1524 aa15□□□□□ -0.01
ITGA6-210ENST00000475302 PCF11O94913 1555 aaKnown RBP14.99□□□□□ -0.01
ITGA6-210ENST00000475302 KANK4Q5T7N3 995 aaPredicted RBP14.99□□□□□ -0.01
ITGA6-210ENST00000475302 FMN1Q68DA7 1419 aa14.99□□□□□ -0.01
ITGA6-210ENST00000475302 FYCO1Q9BQS8 1478 aa14.97□□□□□ -0.01
ITGA6-210ENST00000475302 TIAM1Q13009 1591 aa14.97□□□□□ -0.01
ITGA6-210ENST00000475302 KIAA0556O60303 1618 aa14.95□□□□□ -0.02
ITGA6-210ENST00000475302 CFAP43Q8NDM7 1665 aa14.93□□□□□ -0.02
ITGA6-210ENST00000475302 CHD1O14646 1710 aa14.92□□□□□ -0.02
ITGA6-210ENST00000475302 LRRC9Q6ZRR7 1453 aa14.9□□□□□ -0.02
ITGA6-210ENST00000475302 LRRIQ1Q96JM4 1722 aa14.9□□□□□ -0.02
ITGA6-210ENST00000475302 JPH4Q96JJ6 628 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms