RNA–Protein interactions for RNA: ENST00000473311.5

ABCF3-210, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 5

Gene ABCF3, Length 2,844 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-210ENST00000473311 MAP3K1Q13233 1512 aa20.15■□□□□ 0.82
ABCF3-210ENST00000473311 LRRC9Q6ZRR7 1453 aa20.12■□□□□ 0.81
ABCF3-210ENST00000473311 MAPKBP1O60336 1514 aa20.1■□□□□ 0.81
ABCF3-210ENST00000473311 SETD5Q9C0A6 1442 aa20.09■□□□□ 0.81
ABCF3-210ENST00000473311 FAM50AQ14320 339 aaKnown RBP20.08■□□□□ 0.81
ABCF3-210ENST00000473311 PHLDB1Q86UU1 1377 aa20.08■□□□□ 0.81
ABCF3-210ENST00000473311 FHAD1B1AJZ9 1412 aa20.08■□□□□ 0.81
ABCF3-210ENST00000473311 P3H3Q8IVL6 736 aa20.08■□□□□ 0.8
ABCF3-210ENST00000473311 ATP1B4Q9UN42 357 aaPredicted RBP20.07■□□□□ 0.8
ABCF3-210ENST00000473311 PCF11O94913 1555 aaKnown RBP20.04■□□□□ 0.8
ABCF3-210ENST00000473311 CFAP43Q8NDM7 1665 aa20.03■□□□□ 0.8
ABCF3-210ENST00000473311 SUPT16HQ9Y5B9 1047 aaKnown RBP20.01■□□□□ 0.79
ABCF3-210ENST00000473311 FANCD2Q9BXW9 1451 aa20■□□□□ 0.79
ABCF3-210ENST00000473311 SIN3AQ96ST3 1273 aa19.98■□□□□ 0.79
ABCF3-210ENST00000473311 FHOD3Q2V2M9 1422 aa19.98■□□□□ 0.79
ABCF3-210ENST00000473311 RAD54L2Q9Y4B4 1467 aa19.96■□□□□ 0.79
ABCF3-210ENST00000473311 WDR97A6NE52 1622 aa19.95■□□□□ 0.78
ABCF3-210ENST00000473311 CC2D2AQ9P2K1 1620 aa19.94■□□□□ 0.78
ABCF3-210ENST00000473311 KCNH8Q96L42 1107 aa19.94■□□□□ 0.78
ABCF3-210ENST00000473311 DNMBPQ6XZF7 1577 aa19.93■□□□□ 0.78
ABCF3-210ENST00000473311 FYCO1Q9BQS8 1478 aa19.92■□□□□ 0.78
ABCF3-210ENST00000473311 ABCA10Q8WWZ4 1543 aa19.91■□□□□ 0.78
ABCF3-210ENST00000473311 EFCAB5A4FU69 1503 aa19.9■□□□□ 0.78
ABCF3-210ENST00000473311 DDX10Q13206 875 aaKnown RBP19.9■□□□□ 0.78
ABCF3-210ENST00000473311 POLA1P09884 1462 aaPredicted RBP19.9■□□□□ 0.78
ABCF3-210ENST00000473311 CASKIN1Q8WXD9 1431 aa19.89■□□□□ 0.77
ABCF3-210ENST00000473311 TOPBP1Q92547 1522 aa19.88■□□□□ 0.77
ABCF3-210ENST00000473311 CTTNBP2Q8WZ74 1663 aa19.86■□□□□ 0.77
ABCF3-210ENST00000473311 CUL7Q14999 1698 aa19.86■□□□□ 0.77
ABCF3-210ENST00000473311 TIMELESSQ9UNS1 1208 aa19.85■□□□□ 0.77
ABCF3-210ENST00000473311 AQRO60306 1485 aaKnown RBP eCLIP19.85■□□□□ 0.777e-7■■■■■ 27.7
ABCF3-210ENST00000473311 TSHZ2Q9NRE2 1034 aa19.84■□□□□ 0.77
ABCF3-210ENST00000473311 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.83■□□□□ 0.77
ABCF3-210ENST00000473311 NESP48681 1621 aa19.82■□□□□ 0.76
ABCF3-210ENST00000473311 FMN1Q68DA7 1419 aa19.82■□□□□ 0.76
ABCF3-210ENST00000473311 HIRIP3Q9BW71 556 aaPredicted RBP19.81■□□□□ 0.76
ABCF3-210ENST00000473311 FGD6Q6ZV73 1430 aa19.8■□□□□ 0.76
ABCF3-210ENST00000473311 PPP1R15AO75807 674 aaPredicted RBP19.8■□□□□ 0.76
ABCF3-210ENST00000473311 MTUS2Q5JR59 1369 aa19.79■□□□□ 0.76
ABCF3-210ENST00000473311 SNAPC4Q5SXM2 1469 aa19.76■□□□□ 0.75
ABCF3-210ENST00000473311 TONSLQ96HA7 1378 aa19.75■□□□□ 0.75
ABCF3-210ENST00000473311 CCDC18Q5T9S5 1454 aa19.74■□□□□ 0.75
ABCF3-210ENST00000473311 ANP32CO43423 234 aa19.71■□□□□ 0.74
ABCF3-210ENST00000473311 TDRD9Q8NDG6 1382 aaKnown RBP19.69■□□□□ 0.74
ABCF3-210ENST00000473311 HFM1A2PYH4 1435 aa19.69■□□□□ 0.74
ABCF3-210ENST00000473311 PTPRKQ15262 1439 aa19.69■□□□□ 0.74
ABCF3-210ENST00000473311 BCANQ96GW7 911 aa19.69■□□□□ 0.74
ABCF3-210ENST00000473311 URB2Q14146 1524 aaKnown RBP19.69■□□□□ 0.74
ABCF3-210ENST00000473311 UACAQ9BZF9 1416 aa19.69■□□□□ 0.74
ABCF3-210ENST00000473311 PTPN23Q9H3S7 1636 aa19.68■□□□□ 0.74
ABCF3-210ENST00000473311 LRRIQ1Q96JM4 1722 aa19.68■□□□□ 0.74
ABCF3-210ENST00000473311 SAMD9Q5K651 1589 aa19.67■□□□□ 0.74
ABCF3-210ENST00000473311 FKBP8Q14318 412 aa19.67■□□□□ 0.74
ABCF3-210ENST00000473311 NCOA2Q15596 1464 aa19.67■□□□□ 0.74
ABCF3-210ENST00000473311 CCER2I3L3R5 266 aa19.66■□□□□ 0.74
ABCF3-210ENST00000473311 MYOM3Q5VTT5 1437 aa19.65■□□□□ 0.74
ABCF3-210ENST00000473311 GAPVD1Q14C86 1478 aa19.65■□□□□ 0.74
ABCF3-210ENST00000473311 ABCA5Q8WWZ7 1642 aa19.65■□□□□ 0.74
ABCF3-210ENST00000473311 LAMC3Q9Y6N6 1575 aa19.64■□□□□ 0.73
ABCF3-210ENST00000473311 GRIN2BQ13224 1484 aa19.64■□□□□ 0.73
ABCF3-210ENST00000473311 NAIPQ13075 1403 aa19.63■□□□□ 0.73
ABCF3-210ENST00000473311 TRIM52Q96A61 297 aa19.63■□□□□ 0.73
ABCF3-210ENST00000473311 SUPT6HQ7KZ85 1726 aaKnown RBP19.63■□□□□ 0.73
ABCF3-210ENST00000473311 EHBP1L1Q8N3D4 1523 aa19.61■□□□□ 0.73
ABCF3-210ENST00000473311 MYT1LQ9UL68 1186 aa19.61■□□□□ 0.73
ABCF3-210ENST00000473311 THOC2Q8NI27 1593 aaKnown RBP19.6■□□□□ 0.73
ABCF3-210ENST00000473311 NEFLP07196 543 aa19.6■□□□□ 0.73
ABCF3-210ENST00000473311 UGGT2Q9NYU1 1516 aa19.55■□□□□ 0.72
ABCF3-210ENST00000473311 RRP7BPQ9NSQ0 103 aa19.55■□□□□ 0.72
ABCF3-210ENST00000473311 CHIC2Q9UKJ5 165 aa19.53■□□□□ 0.72
ABCF3-210ENST00000473311 PDS5BQ9NTI5 1447 aa19.53■□□□□ 0.72
ABCF3-210ENST00000473311 KIF21AQ7Z4S6 1674 aa19.52■□□□□ 0.72
ABCF3-210ENST00000473311 MAGI3Q5TCQ9 1506 aa19.52■□□□□ 0.72
ABCF3-210ENST00000473311 ARHGEF11O15085 1522 aa19.5■□□□□ 0.71
ABCF3-210ENST00000473311 KDM5BQ9UGL1 1544 aa19.49■□□□□ 0.71
ABCF3-210ENST00000473311 HECW1Q76N89 1606 aa19.47■□□□□ 0.71
ABCF3-210ENST00000473311 GCC2Q8IWJ2 1684 aa19.46■□□□□ 0.71
ABCF3-210ENST00000473311 TCOF1Q13428 1488 aaKnown RBP19.46■□□□□ 0.71
ABCF3-210ENST00000473311 TARBP1Q13395 1621 aaKnown RBP19.44■□□□□ 0.7
ABCF3-210ENST00000473311 HSPA5P11021 654 aaKnown RBP19.43■□□□□ 0.7
ABCF3-210ENST00000473311 EPRSP07814 1512 aaKnown RBP19.42■□□□□ 0.7
ABCF3-210ENST00000473311 ARID3CA6NKF2 412 aa19.42■□□□□ 0.7
ABCF3-210ENST00000473311 IQGAP2Q13576 1575 aa19.42■□□□□ 0.7
ABCF3-210ENST00000473311 DENND4BO75064 1496 aaPredicted RBP19.41■□□□□ 0.7
ABCF3-210ENST00000473311 HNRNPUQ00839 825 aaKnown RBP eCLIP19.41■□□□□ 0.7
ABCF3-210ENST00000473311 KDM6BO15054 1643 aa19.41■□□□□ 0.7
ABCF3-210ENST00000473311 WASHC2AQ641Q2 1341 aa19.41■□□□□ 0.7
ABCF3-210ENST00000473311 PBRM1Q86U86 1689 aa19.41■□□□□ 0.7
ABCF3-210ENST00000473311 CDK13Q14004 1512 aaKnown RBP19.41■□□□□ 0.7
ABCF3-210ENST00000473311 DNAJC5BQ9UF47 199 aa19.4■□□□□ 0.7
ABCF3-210ENST00000473311 AKNAQ7Z591 1439 aa19.4■□□□□ 0.7
ABCF3-210ENST00000473311 EIF4G2P78344 907 aaKnown RBP eCLIP19.39■□□□□ 0.69
ABCF3-210ENST00000473311 MPHOSPH9Q99550 1183 aa19.38■□□□□ 0.69
ABCF3-210ENST00000473311 MIA2Q96PC5 1412 aa19.37■□□□□ 0.69
ABCF3-210ENST00000473311 ANO8Q9HCE9 1232 aaPredicted RBP19.37■□□□□ 0.69
ABCF3-210ENST00000473311 FOXD1Q16676 465 aa19.35■□□□□ 0.69
ABCF3-210ENST00000473311 L3MBTL2Q969R5 705 aa19.34■□□□□ 0.69
ABCF3-210ENST00000473311 RBM19Q9Y4C8 960 aaKnown RBP19.34■□□□□ 0.69
ABCF3-210ENST00000473311 WDR62O43379 1518 aa19.34■□□□□ 0.69
ABCF3-210ENST00000473311 ADAMTS12P58397 1594 aa19.33■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms