RNA–Protein interactions for RNA: ENST00000472558.6

IFFO1-208, Transcript of intermediate filament family orphan 1, humanhuman

TSL 2

Gene IFFO1, Length 2,571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFFO1-208ENST00000472558 PPP1R15AO75807 674 aaPredicted RBP19.82■□□□□ 0.76
IFFO1-208ENST00000472558 CUX1P39880 1505 aa19.8■□□□□ 0.76
IFFO1-208ENST00000472558 NEFLP07196 543 aa19.8■□□□□ 0.76
IFFO1-208ENST00000472558 PRXQ9BXM0 1461 aa19.8■□□□□ 0.76
IFFO1-208ENST00000472558 SIN3AQ96ST3 1273 aa19.79■□□□□ 0.76
IFFO1-208ENST00000472558 HIRIP3Q9BW71 556 aaPredicted RBP19.79■□□□□ 0.76
IFFO1-208ENST00000472558 FANCD2Q9BXW9 1451 aa19.78■□□□□ 0.76
IFFO1-208ENST00000472558 ERICH3Q5RHP9 1530 aa19.77■□□□□ 0.75
IFFO1-208ENST00000472558 PRKCSHP14314 528 aaPredicted RBP19.76■□□□□ 0.75
IFFO1-208ENST00000472558 TOP2BQ02880 1626 aa19.75■□□□□ 0.75
IFFO1-208ENST00000472558 CCER2I3L3R5 266 aa19.69■□□□□ 0.74
IFFO1-208ENST00000472558 ARHGAP35Q9NRY4 1499 aa19.68■□□□□ 0.74
IFFO1-208ENST00000472558 PRDM2Q13029 1718 aa19.67■□□□□ 0.74
IFFO1-208ENST00000472558 SETD5Q9C0A6 1442 aa19.65■□□□□ 0.74
IFFO1-208ENST00000472558 FANCIQ9NVI1 1328 aa19.65■□□□□ 0.74
IFFO1-208ENST00000472558 BIVM-ERCC5R4GMW8 1640 aa19.64■□□□□ 0.73
IFFO1-208ENST00000472558 ANP32CO43423 234 aa19.64■□□□□ 0.73
IFFO1-208ENST00000472558 IRX6P78412 446 aaPredicted RBP19.62■□□□□ 0.73
IFFO1-208ENST00000472558 LAMC3Q9Y6N6 1575 aa19.62■□□□□ 0.73
IFFO1-208ENST00000472558 FGD5Q6ZNL6 1462 aa19.6■□□□□ 0.73
IFFO1-208ENST00000472558 KIF21AQ7Z4S6 1674 aa19.6■□□□□ 0.73
IFFO1-208ENST00000472558 RAD54L2Q9Y4B4 1467 aa19.59■□□□□ 0.73
IFFO1-208ENST00000472558 URB2Q14146 1524 aaKnown RBP19.56■□□□□ 0.72
IFFO1-208ENST00000472558 PDS5BQ9NTI5 1447 aa19.56■□□□□ 0.72
IFFO1-208ENST00000472558 SLC24A1O60721 1099 aa19.56■□□□□ 0.72
IFFO1-208ENST00000472558 PHLDB1Q86UU1 1377 aa19.55■□□□□ 0.72
IFFO1-208ENST00000472558 TOPBP1Q92547 1522 aa19.54■□□□□ 0.72
IFFO1-208ENST00000472558 CDK11AQ9UQ88 783 aaPredicted RBP19.53■□□□□ 0.72
IFFO1-208ENST00000472558 TIAM1Q13009 1591 aa19.53■□□□□ 0.72
IFFO1-208ENST00000472558 ERICH6Q7L0X2 663 aa19.51■□□□□ 0.71
IFFO1-208ENST00000472558 TIMELESSQ9UNS1 1208 aa19.51■□□□□ 0.71
IFFO1-208ENST00000472558 FAM50AQ14320 339 aaKnown RBP19.5■□□□□ 0.71
IFFO1-208ENST00000472558 HNRNPUQ00839 825 aaKnown RBP eCLIP19.49■□□□□ 0.71
IFFO1-208ENST00000472558 POLA1P09884 1462 aaPredicted RBP19.49■□□□□ 0.71
IFFO1-208ENST00000472558 KIF27Q86VH2 1401 aa19.48■□□□□ 0.71
IFFO1-208ENST00000472558 LRRC9Q6ZRR7 1453 aa19.47■□□□□ 0.71
IFFO1-208ENST00000472558 DNMBPQ6XZF7 1577 aa19.47■□□□□ 0.71
IFFO1-208ENST00000472558 MAP3K1Q13233 1512 aa19.44■□□□□ 0.7
IFFO1-208ENST00000472558 ERCC6Q03468 1493 aa19.44■□□□□ 0.7
IFFO1-208ENST00000472558 TDRD9Q8NDG6 1382 aaKnown RBP19.43■□□□□ 0.7
IFFO1-208ENST00000472558 DEKP35659 375 aaKnown RBP19.43■□□□□ 0.7
IFFO1-208ENST00000472558 IGF1RP08069 1367 aa19.36■□□□□ 0.69
IFFO1-208ENST00000472558 PPP4R2Q9NY27 417 aa19.36■□□□□ 0.69
IFFO1-208ENST00000472558 TONSLQ96HA7 1378 aa19.35■□□□□ 0.69
IFFO1-208ENST00000472558 CCDC184Q52MB2 194 aa19.35■□□□□ 0.69
IFFO1-208ENST00000472558 B4GALNT3Q6L9W6 998 aa19.34■□□□□ 0.69
IFFO1-208ENST00000472558 MRC2Q9UBG0 1479 aa19.33■□□□□ 0.68
IFFO1-208ENST00000472558 MYT1LQ9UL68 1186 aa19.32■□□□□ 0.68
IFFO1-208ENST00000472558 PAK3O75914 559 aaPredicted RBP19.3■□□□□ 0.68
IFFO1-208ENST00000472558 ERICH6BQ5W0A0 696 aa19.3■□□□□ 0.68
IFFO1-208ENST00000472558 CFAP43Q8NDM7 1665 aa19.29■□□□□ 0.68
IFFO1-208ENST00000472558 WASHC2AQ641Q2 1341 aa19.29■□□□□ 0.68
IFFO1-208ENST00000472558 P3H3Q8IVL6 736 aa19.29■□□□□ 0.68
IFFO1-208ENST00000472558 KDM5BQ9UGL1 1544 aa19.28■□□□□ 0.68
IFFO1-208ENST00000472558 PCF11O94913 1555 aaKnown RBP19.28■□□□□ 0.68
IFFO1-208ENST00000472558 ABCA10Q8WWZ4 1543 aa19.27■□□□□ 0.68
IFFO1-208ENST00000472558 AQRO60306 1485 aaKnown RBP eCLIP19.27■□□□□ 0.684e-8■■■■□ 24.3
IFFO1-208ENST00000472558 NBR1Q14596 966 aa19.27■□□□□ 0.68
IFFO1-208ENST00000472558 ATP1B4Q9UN42 357 aaPredicted RBP19.27■□□□□ 0.67
IFFO1-208ENST00000472558 CARMIL1Q5VZK9 1371 aa19.26■□□□□ 0.67
IFFO1-208ENST00000472558 FHAD1B1AJZ9 1412 aa19.25■□□□□ 0.67
IFFO1-208ENST00000472558 NOP58Q9Y2X3 529 aaKnown RBP19.24■□□□□ 0.67
IFFO1-208ENST00000472558 ZNF608Q9ULD9 1512 aaPredicted RBP19.24■□□□□ 0.67
IFFO1-208ENST00000472558 CCDC18Q5T9S5 1454 aa19.23■□□□□ 0.67
IFFO1-208ENST00000472558 PTPRKQ15262 1439 aa19.22■□□□□ 0.67
IFFO1-208ENST00000472558 HSPA5P11021 654 aaKnown RBP19.21■□□□□ 0.67
IFFO1-208ENST00000472558 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.2■□□□□ 0.66
IFFO1-208ENST00000472558 UACAQ9BZF9 1416 aa19.2■□□□□ 0.66
IFFO1-208ENST00000472558 TARBP1Q13395 1621 aaKnown RBP19.19■□□□□ 0.66
IFFO1-208ENST00000472558 GAPVD1Q14C86 1478 aa19.19■□□□□ 0.66
IFFO1-208ENST00000472558 FAM9BQ8IZU0 186 aa19.19■□□□□ 0.66
IFFO1-208ENST00000472558 WDR62O43379 1518 aa19.17■□□□□ 0.66
IFFO1-208ENST00000472558 THOC2Q8NI27 1593 aaKnown RBP19.17■□□□□ 0.66
IFFO1-208ENST00000472558 ANO8Q9HCE9 1232 aaPredicted RBP19.17■□□□□ 0.66
IFFO1-208ENST00000472558 FHOD3Q2V2M9 1422 aa19.16■□□□□ 0.66
IFFO1-208ENST00000472558 C11orf95C9JLR9 678 aaPredicted RBP19.15■□□□□ 0.66
IFFO1-208ENST00000472558 FGD6Q6ZV73 1430 aa19.15■□□□□ 0.66
IFFO1-208ENST00000472558 PTPN23Q9H3S7 1636 aa19.15■□□□□ 0.66
IFFO1-208ENST00000472558 HFM1A2PYH4 1435 aa19.14■□□□□ 0.66
IFFO1-208ENST00000472558 NCOA2Q15596 1464 aa19.14■□□□□ 0.65
IFFO1-208ENST00000472558 PRKRIP1Q9H875 184 aaPredicted RBP19.13■□□□□ 0.65
IFFO1-208ENST00000472558 CNTLNQ9NXG0 1405 aa19.13■□□□□ 0.65
IFFO1-208ENST00000472558 ZBED9Q6R2W3 1325 aa19.13■□□□□ 0.65
IFFO1-208ENST00000472558 ABCA5Q8WWZ7 1642 aa19.11■□□□□ 0.65
IFFO1-208ENST00000472558 NAIPQ13075 1403 aa19.11■□□□□ 0.65
IFFO1-208ENST00000472558 MRS2Q9HD23 443 aa19.1■□□□□ 0.65
IFFO1-208ENST00000472558 FYCO1Q9BQS8 1478 aa19.08■□□□□ 0.65
IFFO1-208ENST00000472558 FBLN2P98095 1184 aa19.07■□□□□ 0.64
IFFO1-208ENST00000472558 AKNAQ7Z591 1439 aa19.07■□□□□ 0.64
IFFO1-208ENST00000472558 CASKIN1Q8WXD9 1431 aa19.06■□□□□ 0.64
IFFO1-208ENST00000472558 EIF4G2P78344 907 aaKnown RBP eCLIP19.06■□□□□ 0.64
IFFO1-208ENST00000472558 DENND4BO75064 1496 aaPredicted RBP19.06■□□□□ 0.64
IFFO1-208ENST00000472558 IFT140Q96RY7 1462 aa19.05■□□□□ 0.64
IFFO1-208ENST00000472558 IPO9Q96P70 1041 aaKnown RBP19.04■□□□□ 0.64
IFFO1-208ENST00000472558 SALL2Q9Y467 1007 aaPredicted RBP19.04■□□□□ 0.64
IFFO1-208ENST00000472558 CCDC7Q96M83 1385 aa19.02■□□□□ 0.64
IFFO1-208ENST00000472558 NCOA1Q15788 1441 aa19.01■□□□□ 0.63
IFFO1-208ENST00000472558 IL27Q8NEV9 243 aa19.01■□□□□ 0.63
IFFO1-208ENST00000472558 PBRM1Q86U86 1689 aa19■□□□□ 0.63
IFFO1-208ENST00000472558 EIF4G3O43432 1585 aaKnown RBP19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms