RNA–Protein interactions for RNA: ENST00000470880.6

CHL1-211, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 3

Gene CHL1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-211ENST00000470880 DNMBPQ6XZF7 1577 aa11.11□□□□□ -0.63
CHL1-211ENST00000470880 SRCAPQ6ZRS2 3230 aa11.11□□□□□ -0.63
CHL1-211ENST00000470880 URB2Q14146 1524 aaKnown RBP11.11□□□□□ -0.63
CHL1-211ENST00000470880 WRNQ14191 1432 aaPredicted RBP eCLIP11.09□□□□□ -0.63
CHL1-211ENST00000470880 TOPBP1Q92547 1522 aa11.09□□□□□ -0.63
CHL1-211ENST00000470880 ZBTB22O15209 634 aa11.07□□□□□ -0.64
CHL1-211ENST00000470880 CUX1P39880 1505 aa11.04□□□□□ -0.64
CHL1-211ENST00000470880 GAPVD1Q14C86 1478 aa11.04□□□□□ -0.64
CHL1-211ENST00000470880 ZNF608Q9ULD9 1512 aaPredicted RBP11.04□□□□□ -0.64
CHL1-211ENST00000470880 FGD5Q6ZNL6 1462 aa11.03□□□□□ -0.64
CHL1-211ENST00000470880 IFT140Q96RY7 1462 aa11.02□□□□□ -0.65
CHL1-211ENST00000470880 FAM69CQ0P6D2 419 aa11.02□□□□□ -0.65
CHL1-211ENST00000470880 POLA1P09884 1462 aaPredicted RBP11.01□□□□□ -0.65
CHL1-211ENST00000470880 FBLN2P98095 1184 aa11.01□□□□□ -0.65
CHL1-211ENST00000470880 SYNJ1O43426 1573 aa11.01□□□□□ -0.65
CHL1-211ENST00000470880 TOP2BQ02880 1626 aa11.01□□□□□ -0.65
CHL1-211ENST00000470880 SOGA1O94964 1423 aa11□□□□□ -0.65
CHL1-211ENST00000470880 BIVM-ERCC5R4GMW8 1640 aa10.99□□□□□ -0.65
CHL1-211ENST00000470880 CLASP1Q7Z460 1538 aa10.98□□□□□ -0.65
CHL1-211ENST00000470880 TSPOAP1O95153 1857 aa10.98□□□□□ -0.65
CHL1-211ENST00000470880 RAD54L2Q9Y4B4 1467 aa10.97□□□□□ -0.65
CHL1-211ENST00000470880 PCF11O94913 1555 aaKnown RBP10.97□□□□□ -0.65
CHL1-211ENST00000470880 SNAPC4Q5SXM2 1469 aa10.93□□□□□ -0.66
CHL1-211ENST00000470880 ABCC10Q5T3U5 1492 aa10.92□□□□□ -0.66
CHL1-211ENST00000470880 TARBP1Q13395 1621 aaKnown RBP10.91□□□□□ -0.66
CHL1-211ENST00000470880 TDRD9Q8NDG6 1382 aaKnown RBP10.91□□□□□ -0.66
CHL1-211ENST00000470880 ABCA10Q8WWZ4 1543 aa10.91□□□□□ -0.66
CHL1-211ENST00000470880 SLC34A2O95436 690 aa10.91□□□□□ -0.66
CHL1-211ENST00000470880 WDR97A6NE52 1622 aa10.91□□□□□ -0.66
CHL1-211ENST00000470880 EIF4G3O43432 1585 aaKnown RBP10.9□□□□□ -0.66
CHL1-211ENST00000470880 AQRO60306 1485 aaKnown RBP eCLIP10.89□□□□□ -0.67
CHL1-211ENST00000470880 DIP2BQ9P265 1576 aa10.87□□□□□ -0.67
CHL1-211ENST00000470880 KIF27Q86VH2 1401 aa10.87□□□□□ -0.67
CHL1-211ENST00000470880 GRIN2BQ13224 1484 aa10.86□□□□□ -0.67
CHL1-211ENST00000470880 HSPA2P54652 639 aa10.85□□□□□ -0.67
CHL1-211ENST00000470880 ABCA5Q8WWZ7 1642 aa10.84□□□□□ -0.67
CHL1-211ENST00000470880 FOXD4L1Q9NU39 408 aa10.83□□□□□ -0.68
CHL1-211ENST00000470880 PBRM1Q86U86 1689 aa10.82□□□□□ -0.68
CHL1-211ENST00000470880 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.81□□□□□ -0.68
CHL1-211ENST00000470880 MAGI1Q96QZ7 1491 aaPredicted RBP10.81□□□□□ -0.68
CHL1-211ENST00000470880 CHMP7Q8WUX9 453 aaPredicted RBP10.8□□□□□ -0.68
CHL1-211ENST00000470880 ERICH3Q5RHP9 1530 aa10.79□□□□□ -0.68
CHL1-211ENST00000470880 LTBP4Q8N2S1 1624 aa10.79□□□□□ -0.68
CHL1-211ENST00000470880 PCDH10Q9P2E7 1040 aa10.78□□□□□ -0.68
CHL1-211ENST00000470880 EEA1Q15075 1411 aa10.77□□□□□ -0.68
CHL1-211ENST00000470880 FAM9AQ8IZU1 332 aaPredicted RBP10.77□□□□□ -0.69
CHL1-211ENST00000470880 PTPRMP28827 1452 aa10.76□□□□□ -0.69
CHL1-211ENST00000470880 ADAMTS12P58397 1594 aa10.76□□□□□ -0.69
CHL1-211ENST00000470880 FHAD1B1AJZ9 1412 aa10.75□□□□□ -0.69
CHL1-211ENST00000470880 CUL7Q14999 1698 aa10.75□□□□□ -0.69
CHL1-211ENST00000470880 SETD1AO15047 1707 aaKnown RBP10.73□□□□□ -0.69
CHL1-211ENST00000470880 RUSC2Q8N2Y8 1516 aa10.73□□□□□ -0.69
CHL1-211ENST00000470880 IGF1RP08069 1367 aa10.72□□□□□ -0.69
CHL1-211ENST00000470880 CARMIL1Q5VZK9 1371 aa10.72□□□□□ -0.69
CHL1-211ENST00000470880 GRIN2AQ12879 1464 aa10.71□□□□□ -0.69
CHL1-211ENST00000470880 RAPGEF2Q9Y4G8 1499 aa10.68□□□□□ -0.7
CHL1-211ENST00000470880 COL17A1Q9UMD9 1497 aaPredicted RBP10.68□□□□□ -0.7
CHL1-211ENST00000470880 RGS17Q9UGC6 210 aaPredicted RBP10.66□□□□□ -0.7
CHL1-211ENST00000470880 HSPA1LP34931 641 aa10.65□□□□□ -0.7
CHL1-211ENST00000470880 IQSEC2Q5JU85 1478 aa10.65□□□□□ -0.7
CHL1-211ENST00000470880 SLC4A2P04920 1241 aa10.64□□□□□ -0.71
CHL1-211ENST00000470880 MAPKBP1O60336 1514 aa10.63□□□□□ -0.71
CHL1-211ENST00000470880 UBAP1LF5GYI3 381 aa10.63□□□□□ -0.71
CHL1-211ENST00000470880 PRXQ9BXM0 1461 aa10.62□□□□□ -0.71
CHL1-211ENST00000470880 NUP160Q12769 1436 aa10.62□□□□□ -0.71
CHL1-211ENST00000470880 CEP170Q5SW79 1584 aa10.61□□□□□ -0.71
CHL1-211ENST00000470880 PPRC1Q5VV67 1664 aaKnown RBP10.61□□□□□ -0.71
CHL1-211ENST00000470880 UBTFP17480 764 aaKnown RBP10.61□□□□□ -0.71
CHL1-211ENST00000470880 RNF39Q9H2S5 420 aa10.61□□□□□ -0.71
CHL1-211ENST00000470880 GOLGA3Q08378 1498 aa10.61□□□□□ -0.71
CHL1-211ENST00000470880 KIF21BO75037 1637 aa10.6□□□□□ -0.71
CHL1-211ENST00000470880 UPF1Q92900 1129 aaKnown RBP eCLIP10.6□□□□□ -0.71
CHL1-211ENST00000470880 PTPRTO14522 1441 aa10.59□□□□□ -0.71
CHL1-211ENST00000470880 RBM33Q96EV2 1170 aaKnown RBP10.59□□□□□ -0.71
CHL1-211ENST00000470880 KIAA0586Q9BVV6 1533 aa10.58□□□□□ -0.72
CHL1-211ENST00000470880 SENP3-EIF4A1A0A087X0R7 540 aa10.58□□□□□ -0.72
CHL1-211ENST00000470880 ADAMTSL3P82987 1691 aa10.57□□□□□ -0.72
CHL1-211ENST00000470880 IQGAP2Q13576 1575 aa10.56□□□□□ -0.72
CHL1-211ENST00000470880 RANGAP1P46060 587 aaPredicted RBP10.55□□□□□ -0.72
CHL1-211ENST00000470880 CTTNBP2Q8WZ74 1663 aa10.54□□□□□ -0.72
CHL1-211ENST00000470880 CARMIL2Q6F5E8 1435 aa10.54□□□□□ -0.72
CHL1-211ENST00000470880 JPH4Q96JJ6 628 aa10.54□□□□□ -0.72
CHL1-211ENST00000470880 PRG4Q92954 1404 aaPredicted RBP10.53□□□□□ -0.72
CHL1-211ENST00000470880 POTEAQ6S8J7 498 aa10.53□□□□□ -0.72
CHL1-211ENST00000470880 RTN4Q9NQC3 1192 aaKnown RBP10.53□□□□□ -0.72
CHL1-211ENST00000470880 U3KPZ7 1027 aaPredicted RBP10.53□□□□□ -0.72
CHL1-211ENST00000470880 C1QBPQ07021 282 aaKnown RBP10.52□□□□□ -0.73
CHL1-211ENST00000470880 TTBK1Q5TCY1 1321 aaPredicted RBP10.52□□□□□ -0.73
CHL1-211ENST00000470880 NPM1P06748 294 aaKnown RBP eCLIP10.5□□□□□ -0.73
CHL1-211ENST00000470880 SHROOM2Q13796 1616 aa10.49□□□□□ -0.73
CHL1-211ENST00000470880 SLC24A1O60721 1099 aa10.49□□□□□ -0.73
CHL1-211ENST00000470880 STRCQ7RTU9 1775 aa10.49□□□□□ -0.73
CHL1-211ENST00000470880 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.48□□□□□ -0.73
CHL1-211ENST00000470880 MYCNP04198 464 aaPredicted RBP10.48□□□□□ -0.73
CHL1-211ENST00000470880 CACNB1Q02641 598 aaPredicted RBP10.48□□□□□ -0.73
CHL1-211ENST00000470880 HNRNPUL2Q1KMD3 747 aaKnown RBP10.48□□□□□ -0.73
CHL1-211ENST00000470880 UGGT2Q9NYU1 1516 aa10.48□□□□□ -0.73
CHL1-211ENST00000470880 AMER1Q5JTC6 1135 aaPredicted RBP10.47□□□□□ -0.73
CHL1-211ENST00000470880 KIAA0556O60303 1618 aa10.45□□□□□ -0.74
CHL1-211ENST00000470880 MADDQ8WXG6 1647 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms