RNA–Protein interactions for RNA: ENST00000470189.2

C1D-205, Transcript of C1D nuclear receptor corepressor, humanhuman

TSL 3

Gene C1D, Length 665 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1D-205ENST00000470189 CUL7Q14999 1698 aa13.34□□□□□ -0.27
C1D-205ENST00000470189 HOXD11P31277 338 aaPredicted RBP13.34□□□□□ -0.27
C1D-205ENST00000470189 CLIP1P30622 1438 aa13.33□□□□□ -0.28
C1D-205ENST00000470189 TARBP1Q13395 1621 aaKnown RBP13.33□□□□□ -0.28
C1D-205ENST00000470189 ABCA5Q8WWZ7 1642 aa13.33□□□□□ -0.28
C1D-205ENST00000470189 TRIM26Q12899 539 aaPredicted RBP13.31□□□□□ -0.28
C1D-205ENST00000470189 IFT140Q96RY7 1462 aa13.3□□□□□ -0.28
C1D-205ENST00000470189 GAPVD1Q14C86 1478 aa13.29□□□□□ -0.28
C1D-205ENST00000470189 ERCC6Q03468 1493 aa13.28□□□□□ -0.28
C1D-205ENST00000470189 THOC2Q8NI27 1593 aaKnown RBP13.25□□□□□ -0.29
C1D-205ENST00000470189 VPS8Q8N3P4 1428 aa13.25□□□□□ -0.29
C1D-205ENST00000470189 TDRD9Q8NDG6 1382 aaKnown RBP13.23□□□□□ -0.29
C1D-205ENST00000470189 GRIN2BQ13224 1484 aa13.21□□□□□ -0.3
C1D-205ENST00000470189 FHAD1B1AJZ9 1412 aa13.2□□□□□ -0.3
C1D-205ENST00000470189 PCGF6Q9BYE7 350 aa13.18□□□□□ -0.3
C1D-205ENST00000470189 PBRM1Q86U86 1689 aa13.17□□□□□ -0.3
C1D-205ENST00000470189 ARHGAP35Q9NRY4 1499 aa13.16□□□□□ -0.3
C1D-205ENST00000470189 EFCAB5A4FU69 1503 aa13.16□□□□□ -0.3
C1D-205ENST00000470189 ARAP1Q96P48 1450 aa13.16□□□□□ -0.3
C1D-205ENST00000470189 CTTNBP2Q8WZ74 1663 aa13.15□□□□□ -0.31
C1D-205ENST00000470189 ADAMTS12P58397 1594 aa13.13□□□□□ -0.31
C1D-205ENST00000470189 AQRO60306 1485 aaKnown RBP eCLIP13.13□□□□□ -0.31
C1D-205ENST00000470189 SLC4A2P04920 1241 aa13.13□□□□□ -0.31
C1D-205ENST00000470189 APLP2Q06481 763 aa13.12□□□□□ -0.31
C1D-205ENST00000470189 MAP3K1Q13233 1512 aa13.12□□□□□ -0.31
C1D-205ENST00000470189 MAGI1Q96QZ7 1491 aaPredicted RBP13.11□□□□□ -0.31
C1D-205ENST00000470189 ZNF608Q9ULD9 1512 aaPredicted RBP13.09□□□□□ -0.31
C1D-205ENST00000470189 EIF4G3O43432 1585 aaKnown RBP13.08□□□□□ -0.32
C1D-205ENST00000470189 SAMD9Q5K651 1589 aa13.05□□□□□ -0.32
C1D-205ENST00000470189 FMN1Q68DA7 1419 aa13.05□□□□□ -0.32
C1D-205ENST00000470189 SYNJ2O15056 1496 aa13.04□□□□□ -0.32
C1D-205ENST00000470189 KIAA0586Q9BVV6 1533 aa13.03□□□□□ -0.32
C1D-205ENST00000470189 SNAPC4Q5SXM2 1469 aa13.03□□□□□ -0.32
C1D-205ENST00000470189 GRIN2AQ12879 1464 aa13.02□□□□□ -0.33
C1D-205ENST00000470189 CASKIN1Q8WXD9 1431 aa13.01□□□□□ -0.33
C1D-205ENST00000470189 UGGT2Q9NYU1 1516 aa13.01□□□□□ -0.33
C1D-205ENST00000470189 IQGAP2Q13576 1575 aa13.01□□□□□ -0.33
C1D-205ENST00000470189 FYCO1Q9BQS8 1478 aa13□□□□□ -0.33
C1D-205ENST00000470189 RANGAP1P46060 587 aaPredicted RBP13□□□□□ -0.33
C1D-205ENST00000470189 NUP160Q12769 1436 aa12.96□□□□□ -0.33
C1D-205ENST00000470189 TIAM1Q13009 1591 aa12.96□□□□□ -0.33
C1D-205ENST00000470189 HRCP23327 699 aa12.96□□□□□ -0.33
C1D-205ENST00000470189 CHMP7Q8WUX9 453 aaPredicted RBP12.95□□□□□ -0.34
C1D-205ENST00000470189 FHOD3Q2V2M9 1422 aa12.95□□□□□ -0.34
C1D-205ENST00000470189 PPARGC1BQ86YN6 1023 aaKnown RBP12.94□□□□□ -0.34
C1D-205ENST00000470189 CFAP43Q8NDM7 1665 aa12.93□□□□□ -0.34
C1D-205ENST00000470189 ZEB1P37275 1124 aaPredicted RBP12.92□□□□□ -0.34
C1D-205ENST00000470189 PCF11O94913 1555 aaKnown RBP12.91□□□□□ -0.34
C1D-205ENST00000470189 LRRC9Q6ZRR7 1453 aa12.91□□□□□ -0.34
C1D-205ENST00000470189 RRBP1Q9P2E9 1410 aaKnown RBP12.9□□□□□ -0.34
C1D-205ENST00000470189 DCAF8L1A6NGE4 600 aa12.9□□□□□ -0.34
C1D-205ENST00000470189 MYCNP04198 464 aaPredicted RBP12.9□□□□□ -0.34
C1D-205ENST00000470189 KANK4Q5T7N3 995 aaPredicted RBP12.89□□□□□ -0.35
C1D-205ENST00000470189 CCDC18Q5T9S5 1454 aa12.88□□□□□ -0.35
C1D-205ENST00000470189 CEP170Q5SW79 1584 aa12.88□□□□□ -0.35
C1D-205ENST00000470189 DISP1Q96F81 1524 aa12.88□□□□□ -0.35
C1D-205ENST00000470189 P3H3Q8IVL6 736 aa12.87□□□□□ -0.35
C1D-205ENST00000470189 KIAA0556O60303 1618 aa12.87□□□□□ -0.35
C1D-205ENST00000470189 CARMIL2Q6F5E8 1435 aa12.87□□□□□ -0.35
C1D-205ENST00000470189 HECW1Q76N89 1606 aa12.84□□□□□ -0.35
C1D-205ENST00000470189 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.84□□□□□ -0.35
C1D-205ENST00000470189 JPH4Q96JJ6 628 aa12.83□□□□□ -0.36
C1D-205ENST00000470189 CCNB3Q8WWL7 1395 aa12.81□□□□□ -0.36
C1D-205ENST00000470189 FBLN2P98095 1184 aa12.8□□□□□ -0.36
C1D-205ENST00000470189 EHBP1L1Q8N3D4 1523 aa12.79□□□□□ -0.36
C1D-205ENST00000470189 TTBK1Q5TCY1 1321 aaPredicted RBP12.79□□□□□ -0.36
C1D-205ENST00000470189 EPRSP07814 1512 aaKnown RBP12.78□□□□□ -0.36
C1D-205ENST00000470189 MTUS2Q5JR59 1369 aa12.78□□□□□ -0.36
C1D-205ENST00000470189 CHD1O14646 1710 aa12.76□□□□□ -0.37
C1D-205ENST00000470189 ATXN8OSP0DMR3 200 aa12.76□□□□□ -0.37
C1D-205ENST00000470189 SHROOM2Q13796 1616 aa12.76□□□□□ -0.37
C1D-205ENST00000470189 RAPGEF6Q8TEU7 1601 aa12.76□□□□□ -0.37
C1D-205ENST00000470189 LRRIQ1Q96JM4 1722 aa12.76□□□□□ -0.37
C1D-205ENST00000470189 ARHGEF11O15085 1522 aa12.75□□□□□ -0.37
C1D-205ENST00000470189 ATP1B4Q9UN42 357 aaPredicted RBP12.75□□□□□ -0.37
C1D-205ENST00000470189 CDK11AQ9UQ88 783 aaPredicted RBP12.75□□□□□ -0.37
C1D-205ENST00000470189 SUPT6HQ7KZ85 1726 aaKnown RBP12.74□□□□□ -0.37
C1D-205ENST00000470189 PHLDB1Q86UU1 1377 aa12.74□□□□□ -0.37
C1D-205ENST00000470189 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.74□□□□□ -0.37
C1D-205ENST00000470189 NUP153P49790 1475 aaKnown RBP12.72□□□□□ -0.37
C1D-205ENST00000470189 NCOA2Q15596 1464 aa12.72□□□□□ -0.37
C1D-205ENST00000470189 CLSPNQ9HAW4 1339 aa12.71□□□□□ -0.37
C1D-205ENST00000470189 ABCA8O94911 1581 aa12.71□□□□□ -0.37
C1D-205ENST00000470189 MYOM3Q5VTT5 1437 aa12.71□□□□□ -0.38
C1D-205ENST00000470189 PRG4Q92954 1404 aaPredicted RBP12.71□□□□□ -0.38
C1D-205ENST00000470189 CLASP1Q7Z460 1538 aa12.7□□□□□ -0.38
C1D-205ENST00000470189 FGD6Q6ZV73 1430 aa12.7□□□□□ -0.38
C1D-205ENST00000470189 MIA2Q96PC5 1412 aa12.7□□□□□ -0.38
C1D-205ENST00000470189 HNRNPUL2Q1KMD3 747 aaKnown RBP12.69□□□□□ -0.38
C1D-205ENST00000470189 CCER1Q8TC90 406 aaPredicted RBP12.68□□□□□ -0.38
C1D-205ENST00000470189 PTPRGP23470 1445 aa12.68□□□□□ -0.38
C1D-205ENST00000470189 MAGI3Q5TCQ9 1506 aa12.67□□□□□ -0.38
C1D-205ENST00000470189 TROQ12816 1431 aaPredicted RBP12.66□□□□□ -0.38
C1D-205ENST00000470189 TCOF1Q13428 1488 aaKnown RBP12.65□□□□□ -0.38
C1D-205ENST00000470189 CDK13Q14004 1512 aaKnown RBP12.65□□□□□ -0.38
C1D-205ENST00000470189 PLB1Q6P1J6 1458 aa12.65□□□□□ -0.38
C1D-205ENST00000470189 ACIN1Q9UKV3 1341 aaKnown RBP12.64□□□□□ -0.39
C1D-205ENST00000470189 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.64□□□□□ -0.39
C1D-205ENST00000470189 ADCY10Q96PN6 1610 aa12.63□□□□□ -0.39
C1D-205ENST00000470189 UACAQ9BZF9 1416 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms