RNA–Protein interactions for RNA: ENST00000469655.5

KCNC4-206, Transcript of potassium voltage-gated channel subfamily C member 4, humanhuman

TSL 1 (best)

Gene KCNC4, Length 3,487 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC4-206ENST00000469655 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.7■■□□□ 1.06
KCNC4-206ENST00000469655 CFTRP13569 1480 aa21.67■■□□□ 1.06
KCNC4-206ENST00000469655 PRXQ9BXM0 1461 aa21.67■■□□□ 1.06
KCNC4-206ENST00000469655 HMGXB3Q12766 1538 aa21.67■■□□□ 1.06
KCNC4-206ENST00000469655 CUX2O14529 1486 aa21.67■■□□□ 1.06
KCNC4-206ENST00000469655 FAM50AQ14320 339 aaKnown RBP21.66■■□□□ 1.06
KCNC4-206ENST00000469655 ARAP1Q96P48 1450 aa21.64■■□□□ 1.05
KCNC4-206ENST00000469655 CADPSQ9ULU8 1353 aa21.6■■□□□ 1.05
KCNC4-206ENST00000469655 BIVM-ERCC5R4GMW8 1640 aa21.6■■□□□ 1.05
KCNC4-206ENST00000469655 ARID3CA6NKF2 412 aa21.57■■□□□ 1.04
KCNC4-206ENST00000469655 TRIM52Q96A61 297 aa21.57■■□□□ 1.04
KCNC4-206ENST00000469655 IRX6P78412 446 aaPredicted RBP21.56■■□□□ 1.04
KCNC4-206ENST00000469655 IGF1RP08069 1367 aa21.55■■□□□ 1.04
KCNC4-206ENST00000469655 DDX10Q13206 875 aaKnown RBP21.54■■□□□ 1.04
KCNC4-206ENST00000469655 CARMIL1Q5VZK9 1371 aa21.53■■□□□ 1.04
KCNC4-206ENST00000469655 SENP3-EIF4A1A0A087X0R7 540 aa21.52■■□□□ 1.04
KCNC4-206ENST00000469655 ERICH3Q5RHP9 1530 aa21.51■■□□□ 1.03
KCNC4-206ENST00000469655 SIN3AQ96ST3 1273 aa21.49■■□□□ 1.03
KCNC4-206ENST00000469655 FGD5Q6ZNL6 1462 aa21.48■■□□□ 1.03
KCNC4-206ENST00000469655 ARHGAP35Q9NRY4 1499 aa21.48■■□□□ 1.03
KCNC4-206ENST00000469655 CDK11AQ9UQ88 783 aaPredicted RBP21.48■■□□□ 1.03
KCNC4-206ENST00000469655 EIF5BO60841 1220 aaKnown RBP21.44■■□□□ 1.02
KCNC4-206ENST00000469655 DNAJC5BQ9UF47 199 aa21.43■■□□□ 1.02
KCNC4-206ENST00000469655 NESP48681 1621 aa21.42■■□□□ 1.02
KCNC4-206ENST00000469655 CC2D2AQ9P2K1 1620 aa21.42■■□□□ 1.02
KCNC4-206ENST00000469655 RAD54L2Q9Y4B4 1467 aa21.42■■□□□ 1.02
KCNC4-206ENST00000469655 IL27Q8NEV9 243 aa21.42■■□□□ 1.02
KCNC4-206ENST00000469655 DHX57Q6P158 1386 aaKnown RBP21.42■■□□□ 1.02
KCNC4-206ENST00000469655 CCNB3Q8WWL7 1395 aa21.41■■□□□ 1.02
KCNC4-206ENST00000469655 FANCD2Q9BXW9 1451 aa21.4■■□□□ 1.02
KCNC4-206ENST00000469655 MYT1LQ9UL68 1186 aa21.35■■□□□ 1.01
KCNC4-206ENST00000469655 FANCIQ9NVI1 1328 aa21.32■■□□□ 1
KCNC4-206ENST00000469655 RTL5Q5HYW3 569 aaPredicted RBP21.31■■□□□ 1
KCNC4-206ENST00000469655 FHOD3Q2V2M9 1422 aa21.3■■□□□ 1
KCNC4-206ENST00000469655 POLR3GLQ9BT43 218 aa21.3■■□□□ 1
KCNC4-206ENST00000469655 TDRD9Q8NDG6 1382 aaKnown RBP21.3■■□□□ 1
KCNC4-206ENST00000469655 RRBP1Q9P2E9 1410 aaKnown RBP21.26■□□□□ 0.99
KCNC4-206ENST00000469655 RAB3GAP2Q9H2M9 1393 aa21.25■□□□□ 0.99
KCNC4-206ENST00000469655 PHLDB1Q86UU1 1377 aa21.24■□□□□ 0.99
KCNC4-206ENST00000469655 UBE2Q2Q8WVN8 375 aa21.22■□□□□ 0.99
KCNC4-206ENST00000469655 POLA1P09884 1462 aaPredicted RBP21.21■□□□□ 0.99
KCNC4-206ENST00000469655 PAK3O75914 559 aaPredicted RBP21.2■□□□□ 0.98
KCNC4-206ENST00000469655 CHIC2Q9UKJ5 165 aa21.19■□□□□ 0.98
KCNC4-206ENST00000469655 NOP58Q9Y2X3 529 aaKnown RBP21.19■□□□□ 0.98
KCNC4-206ENST00000469655 TOPBP1Q92547 1522 aa21.17■□□□□ 0.98
KCNC4-206ENST00000469655 ERICH6BQ5W0A0 696 aa21.15■□□□□ 0.98
KCNC4-206ENST00000469655 LRRC9Q6ZRR7 1453 aa21.14■□□□□ 0.98
KCNC4-206ENST00000469655 FHAD1B1AJZ9 1412 aa21.14■□□□□ 0.97
KCNC4-206ENST00000469655 TIAM1Q13009 1591 aa21.12■□□□□ 0.97
KCNC4-206ENST00000469655 SETD5Q9C0A6 1442 aa21.09■□□□□ 0.97
KCNC4-206ENST00000469655 MTUS2Q5JR59 1369 aa21.08■□□□□ 0.97
KCNC4-206ENST00000469655 B4GALNT3Q6L9W6 998 aa21.07■□□□□ 0.96
KCNC4-206ENST00000469655 DNMBPQ6XZF7 1577 aa21.07■□□□□ 0.96
KCNC4-206ENST00000469655 PRDM2Q13029 1718 aa21.07■□□□□ 0.96
KCNC4-206ENST00000469655 PCF11O94913 1555 aaKnown RBP21.05■□□□□ 0.96
KCNC4-206ENST00000469655 ABCA10Q8WWZ4 1543 aa21.05■□□□□ 0.96
KCNC4-206ENST00000469655 HNRNPUQ00839 825 aaKnown RBP eCLIP21.04■□□□□ 0.96
KCNC4-206ENST00000469655 URB2Q14146 1524 aaKnown RBP21.03■□□□□ 0.96
KCNC4-206ENST00000469655 ZNF326Q5BKZ1 582 aaKnown RBP21.03■□□□□ 0.96
KCNC4-206ENST00000469655 ANP32CO43423 234 aa21.01■□□□□ 0.95
KCNC4-206ENST00000469655 RRP7BPQ9NSQ0 103 aa21.01■□□□□ 0.95
KCNC4-206ENST00000469655 FOXD1Q16676 465 aa20.99■□□□□ 0.95
KCNC4-206ENST00000469655 TIMELESSQ9UNS1 1208 aa20.98■□□□□ 0.95
KCNC4-206ENST00000469655 GAPVD1Q14C86 1478 aa20.96■□□□□ 0.95
KCNC4-206ENST00000469655 PDS5BQ9NTI5 1447 aa20.96■□□□□ 0.95
KCNC4-206ENST00000469655 PKNOX2Q96KN3 472 aa20.95■□□□□ 0.94
KCNC4-206ENST00000469655 NPM2Q86SE8 214 aaKnown RBP20.95■□□□□ 0.94
KCNC4-206ENST00000469655 ZBTB47Q9UFB7 747 aaPredicted RBP20.95■□□□□ 0.94
KCNC4-206ENST00000469655 LAS1LQ9Y4W2 734 aaKnown RBP20.94■□□□□ 0.94
KCNC4-206ENST00000469655 FAM9BQ8IZU0 186 aa20.93■□□□□ 0.94
KCNC4-206ENST00000469655 CASKIN1Q8WXD9 1431 aa20.92■□□□□ 0.94
KCNC4-206ENST00000469655 ANP32AP39687 249 aaKnown RBP20.92■□□□□ 0.94
KCNC4-206ENST00000469655 MAPKBP1O60336 1514 aa20.92■□□□□ 0.94
KCNC4-206ENST00000469655 FMN1Q68DA7 1419 aa20.92■□□□□ 0.94
KCNC4-206ENST00000469655 AQRO60306 1485 aaKnown RBP eCLIP20.9■□□□□ 0.94
KCNC4-206ENST00000469655 FYCO1Q9BQS8 1478 aa20.88■□□□□ 0.93
KCNC4-206ENST00000469655 MAP3K1Q13233 1512 aa20.88■□□□□ 0.93
KCNC4-206ENST00000469655 FBLN2P98095 1184 aa20.87■□□□□ 0.93
KCNC4-206ENST00000469655 BRPF3Q9ULD4 1205 aa20.86■□□□□ 0.93
KCNC4-206ENST00000469655 FGD6Q6ZV73 1430 aa20.86■□□□□ 0.93
KCNC4-206ENST00000469655 NEFMP07197 916 aa20.84■□□□□ 0.93
KCNC4-206ENST00000469655 PPP4R2Q9NY27 417 aa20.84■□□□□ 0.93
KCNC4-206ENST00000469655 TONSLQ96HA7 1378 aa20.84■□□□□ 0.93
KCNC4-206ENST00000469655 WDR97A6NE52 1622 aa20.83■□□□□ 0.92
KCNC4-206ENST00000469655 LAMC3Q9Y6N6 1575 aa20.82■□□□□ 0.92
KCNC4-206ENST00000469655 EFCAB5A4FU69 1503 aa20.81■□□□□ 0.92
KCNC4-206ENST00000469655 PPP1R15AO75807 674 aaPredicted RBP20.81■□□□□ 0.92
KCNC4-206ENST00000469655 PTPRKQ15262 1439 aa20.8■□□□□ 0.92
KCNC4-206ENST00000469655 CUL7Q14999 1698 aa20.79■□□□□ 0.92
KCNC4-206ENST00000469655 NCOA2Q15596 1464 aa20.77■□□□□ 0.92
KCNC4-206ENST00000469655 IPO9Q96P70 1041 aaKnown RBP20.77■□□□□ 0.92
KCNC4-206ENST00000469655 CFAP43Q8NDM7 1665 aa20.76■□□□□ 0.91
KCNC4-206ENST00000469655 SNAPC4Q5SXM2 1469 aa20.76■□□□□ 0.91
KCNC4-206ENST00000469655 CCDC18Q5T9S5 1454 aa20.75■□□□□ 0.91
KCNC4-206ENST00000469655 PLEKHG5O94827 1062 aa20.74■□□□□ 0.91
KCNC4-206ENST00000469655 ZNF777Q9ULD5 760 aaPredicted RBP20.73■□□□□ 0.91
KCNC4-206ENST00000469655 CTTNBP2Q8WZ74 1663 aa20.73■□□□□ 0.91
KCNC4-206ENST00000469655 KIF21AQ7Z4S6 1674 aa20.72■□□□□ 0.91
KCNC4-206ENST00000469655 MYOM3Q5VTT5 1437 aa20.71■□□□□ 0.91
KCNC4-206ENST00000469655 CCDC184Q52MB2 194 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms