RNA–Protein interactions for RNA: ENST00000469655.5

KCNC4-206, Transcript of potassium voltage-gated channel subfamily C member 4, humanhuman

TSL 1 (best)

Gene KCNC4, Length 3,487 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC4-206ENST00000469655 NISCHQ9Y2I1 1504 aa29.96■■■□□ 2.39
KCNC4-206ENST00000469655 SHROOM4Q9ULL8 1493 aa26.42■■□□□ 1.82
KCNC4-206ENST00000469655 SUPT5HO00267 1087 aaKnown RBP26.13■■□□□ 1.77
KCNC4-206ENST00000469655 DCAF8L2P0C7V8 631 aa25.99■■□□□ 1.75
KCNC4-206ENST00000469655 HRCP23327 699 aa25.68■■□□□ 1.7
KCNC4-206ENST00000469655 PPARGC1BQ86YN6 1023 aaKnown RBP25.61■■□□□ 1.69
KCNC4-206ENST00000469655 PELP1Q8IZL8 1130 aaKnown RBP25.58■■□□□ 1.69
KCNC4-206ENST00000469655 PCGF6Q9BYE7 350 aa25.32■■□□□ 1.64
KCNC4-206ENST00000469655 ZCCHC6Q5VYS8 1495 aaKnown RBP25.24■■□□□ 1.63
KCNC4-206ENST00000469655 CCDC180Q9P1Z9 1646 aa25.14■■□□□ 1.61
KCNC4-206ENST00000469655 EHMT2Q96KQ7 1210 aa25.06■■□□□ 1.6
KCNC4-206ENST00000469655 SCAF1Q9H7N4 1312 aaKnown RBP24.82■■□□□ 1.56
KCNC4-206ENST00000469655 MYT1Q01538 1121 aa24.67■■□□□ 1.54
KCNC4-206ENST00000469655 CHIC1Q5VXU3 224 aa24.63■■□□□ 1.53
KCNC4-206ENST00000469655 LOC105371045A0A1W2PR82 267 aa24.62■■□□□ 1.53
KCNC4-206ENST00000469655 FAM9AQ8IZU1 332 aaPredicted RBP24.49■■□□□ 1.51
KCNC4-206ENST00000469655 MYO15BQ96JP2 1530 aa24.41■■□□□ 1.5
KCNC4-206ENST00000469655 DCAF1Q9Y4B6 1507 aa24.24■■□□□ 1.47
KCNC4-206ENST00000469655 TTBK1Q5TCY1 1321 aaPredicted RBP24.17■■□□□ 1.46
KCNC4-206ENST00000469655 ABCC9O60706 1549 aa24.14■■□□□ 1.46
KCNC4-206ENST00000469655 SCRIBQ14160 1630 aa24.11■■□□□ 1.45
KCNC4-206ENST00000469655 GTF3C3Q9Y5Q9 886 aa24.03■■□□□ 1.44
KCNC4-206ENST00000469655 NEUROD1Q13562 356 aa23.98■■□□□ 1.43
KCNC4-206ENST00000469655 ACIN1Q9UKV3 1341 aaKnown RBP23.93■■□□□ 1.42
KCNC4-206ENST00000469655 TRIM26Q12899 539 aaPredicted RBP23.89■■□□□ 1.41
KCNC4-206ENST00000469655 RSF1Q96T23 1441 aaPredicted RBP23.83■■□□□ 1.4
KCNC4-206ENST00000469655 TRIM41Q8WV44 630 aa23.8■■□□□ 1.4
KCNC4-206ENST00000469655 ZEB1P37275 1124 aaPredicted RBP23.78■■□□□ 1.4
KCNC4-206ENST00000469655 CENPBP07199 599 aaPredicted RBP23.66■■□□□ 1.38
KCNC4-206ENST00000469655 CECR2Q9BXF3 1484 aa23.63■■□□□ 1.37
KCNC4-206ENST00000469655 RB1CC1Q8TDY2 1594 aa23.55■■□□□ 1.36
KCNC4-206ENST00000469655 YTHDC1Q96MU7 727 aaKnown RBP23.53■■□□□ 1.36
KCNC4-206ENST00000469655 NACADO15069 1562 aa23.46■■□□□ 1.35
KCNC4-206ENST00000469655 BCL11AQ9H165 835 aa23.46■■□□□ 1.35
KCNC4-206ENST00000469655 MROH2BQ7Z745 1585 aa23.43■■□□□ 1.34
KCNC4-206ENST00000469655 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.39■■□□□ 1.33
KCNC4-206ENST00000469655 RANGAP1P46060 587 aaPredicted RBP23.38■■□□□ 1.33
KCNC4-206ENST00000469655 DIEXFQ68CQ4 756 aaKnown RBP23.34■■□□□ 1.33
KCNC4-206ENST00000469655 PABPN1Q86U42 306 aaKnown RBP eCLIP23.33■■□□□ 1.32
KCNC4-206ENST00000469655 WIZO95785 1651 aa23.26■■□□□ 1.31
KCNC4-206ENST00000469655 CCER1Q8TC90 406 aaPredicted RBP23.21■■□□□ 1.31
KCNC4-206ENST00000469655 BAZ1AQ9NRL2 1556 aaPredicted RBP22.99■■□□□ 1.27
KCNC4-206ENST00000469655 PRKCSHP14314 528 aaPredicted RBP22.94■■□□□ 1.26
KCNC4-206ENST00000469655 ANP32EQ9BTT0 268 aa22.92■■□□□ 1.26
KCNC4-206ENST00000469655 UBTFP17480 764 aaKnown RBP22.9■■□□□ 1.26
KCNC4-206ENST00000469655 ABCC8Q09428 1581 aa22.88■■□□□ 1.25
KCNC4-206ENST00000469655 CSRNP3Q8WYN3 585 aa22.87■■□□□ 1.25
KCNC4-206ENST00000469655 CCDC88BA6NC98 1476 aa22.85■■□□□ 1.25
KCNC4-206ENST00000469655 HNRNPUL2Q1KMD3 747 aaKnown RBP22.8■■□□□ 1.24
KCNC4-206ENST00000469655 SMARCA4P51532 1647 aa22.78■■□□□ 1.24
KCNC4-206ENST00000469655 TOP2AP11388 1531 aaKnown RBP22.73■■□□□ 1.23
KCNC4-206ENST00000469655 SOGA1O94964 1423 aa22.71■■□□□ 1.23
KCNC4-206ENST00000469655 UNC13AQ9UPW8 1703 aa22.69■■□□□ 1.22
KCNC4-206ENST00000469655 MIER1Q8N108 512 aa22.68■■□□□ 1.22
KCNC4-206ENST00000469655 SMARCA2P51531 1590 aa22.65■■□□□ 1.22
KCNC4-206ENST00000469655 RUSC2Q8N2Y8 1516 aa22.6■■□□□ 1.21
KCNC4-206ENST00000469655 ZNF316A6NFI3 1004 aaPredicted RBP22.57■■□□□ 1.2
KCNC4-206ENST00000469655 TSHZ2Q9NRE2 1034 aa22.56■■□□□ 1.2
KCNC4-206ENST00000469655 EIF4G1Q04637 1599 aaKnown RBP22.56■■□□□ 1.2
KCNC4-206ENST00000469655 BICRAQ9NZM4 1560 aa22.53■■□□□ 1.2
KCNC4-206ENST00000469655 BCANQ96GW7 911 aa22.5■■□□□ 1.19
KCNC4-206ENST00000469655 SUPT16HQ9Y5B9 1047 aaKnown RBP22.5■■□□□ 1.19
KCNC4-206ENST00000469655 CEP162Q5TB80 1403 aa22.5■■□□□ 1.19
KCNC4-206ENST00000469655 WRNQ14191 1432 aaPredicted RBP eCLIP22.45■■□□□ 1.18
KCNC4-206ENST00000469655 ITGAEP38570 1179 aa22.45■■□□□ 1.18
KCNC4-206ENST00000469655 BAZ1BQ9UIG0 1483 aaKnown RBP22.38■■□□□ 1.17
KCNC4-206ENST00000469655 ATAD2BQ9ULI0 1458 aa22.36■■□□□ 1.17
KCNC4-206ENST00000469655 TNIKQ9UKE5 1360 aa22.34■■□□□ 1.17
KCNC4-206ENST00000469655 APLP2Q06481 763 aa22.32■■□□□ 1.16
KCNC4-206ENST00000469655 GOLGA3Q08378 1498 aa22.24■■□□□ 1.15
KCNC4-206ENST00000469655 ERICH6Q7L0X2 663 aa22.23■■□□□ 1.15
KCNC4-206ENST00000469655 EEA1Q15075 1411 aa22.23■■□□□ 1.15
KCNC4-206ENST00000469655 SYNJ1O43426 1573 aa22.21■■□□□ 1.15
KCNC4-206ENST00000469655 ATP1B4Q9UN42 357 aaPredicted RBP22.18■■□□□ 1.14
KCNC4-206ENST00000469655 CLIP1P30622 1438 aa22.13■■□□□ 1.13
KCNC4-206ENST00000469655 PEG3Q9GZU2 1588 aa22.11■■□□□ 1.13
KCNC4-206ENST00000469655 ANO8Q9HCE9 1232 aaPredicted RBP22.1■■□□□ 1.13
KCNC4-206ENST00000469655 CEP164Q9UPV0 1460 aa22.1■■□□□ 1.13
KCNC4-206ENST00000469655 RAPGEF2Q9Y4G8 1499 aa22.09■■□□□ 1.13
KCNC4-206ENST00000469655 RBM19Q9Y4C8 960 aaKnown RBP22.05■■□□□ 1.12
KCNC4-206ENST00000469655 FKBP8Q14318 412 aa22.02■■□□□ 1.12
KCNC4-206ENST00000469655 CCDC136Q96JN2 1154 aa21.92■■□□□ 1.1
KCNC4-206ENST00000469655 CLSPNQ9HAW4 1339 aa21.92■■□□□ 1.1
KCNC4-206ENST00000469655 HIRIP3Q9BW71 556 aaPredicted RBP21.91■■□□□ 1.1
KCNC4-206ENST00000469655 VPS8Q8N3P4 1428 aa21.89■■□□□ 1.09
KCNC4-206ENST00000469655 P3H3Q8IVL6 736 aa21.86■■□□□ 1.09
KCNC4-206ENST00000469655 MSH5O43196 834 aa21.85■■□□□ 1.09
KCNC4-206ENST00000469655 KANK4Q5T7N3 995 aaPredicted RBP21.84■■□□□ 1.09
KCNC4-206ENST00000469655 KIF21BO75037 1637 aa21.84■■□□□ 1.09
KCNC4-206ENST00000469655 NCAPD3P42695 1498 aa21.83■■□□□ 1.08
KCNC4-206ENST00000469655 NEFLP07196 543 aa21.81■■□□□ 1.08
KCNC4-206ENST00000469655 DEKP35659 375 aaKnown RBP21.8■■□□□ 1.08
KCNC4-206ENST00000469655 CNGB1Q14028 1251 aaPredicted RBP21.8■■□□□ 1.08
KCNC4-206ENST00000469655 TOP2BQ02880 1626 aa21.8■■□□□ 1.08
KCNC4-206ENST00000469655 KCNH8Q96L42 1107 aa21.8■■□□□ 1.08
KCNC4-206ENST00000469655 SALL2Q9Y467 1007 aaPredicted RBP21.77■■□□□ 1.08
KCNC4-206ENST00000469655 CUX1P39880 1505 aa21.76■■□□□ 1.07
KCNC4-206ENST00000469655 KIF27Q86VH2 1401 aa21.76■■□□□ 1.07
KCNC4-206ENST00000469655 RTN4Q9NQC3 1192 aaKnown RBP21.72■■□□□ 1.07
KCNC4-206ENST00000469655 NBR1Q14596 966 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 126.3 ms