RNA–Protein interactions for RNA: ENST00000466045.1

CDHR3-203, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 2,358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-203ENST00000466045 EHMT2Q96KQ7 1210 aa13.26□□□□□ -0.29
CDHR3-203ENST00000466045 THOC2Q8NI27 1593 aaKnown RBP13.25□□□□□ -0.29
CDHR3-203ENST00000466045 PRDM2Q13029 1718 aa13.25□□□□□ -0.29
CDHR3-203ENST00000466045 CUX2O14529 1486 aa13.25□□□□□ -0.29
CDHR3-203ENST00000466045 WRNQ14191 1432 aaPredicted RBP eCLIP13.24□□□□□ -0.29
CDHR3-203ENST00000466045 RSPH6AQ9H0K4 717 aa13.24□□□□□ -0.29
CDHR3-203ENST00000466045 RTN4Q9NQC3 1192 aaKnown RBP13.22□□□□□ -0.29
CDHR3-203ENST00000466045 SOGA1O94964 1423 aa13.22□□□□□ -0.29
CDHR3-203ENST00000466045 WDR62O43379 1518 aa13.22□□□□□ -0.29
CDHR3-203ENST00000466045 URB2Q14146 1524 aaKnown RBP13.21□□□□□ -0.29
CDHR3-203ENST00000466045 TNIKQ9UKE5 1360 aa13.21□□□□□ -0.3
CDHR3-203ENST00000466045 FGD1P98174 961 aa13.21□□□□□ -0.3
CDHR3-203ENST00000466045 PDE4CQ08493 712 aa13.2□□□□□ -0.3
CDHR3-203ENST00000466045 NOP58Q9Y2X3 529 aaKnown RBP13.2□□□□□ -0.3
CDHR3-203ENST00000466045 WASHC2AQ641Q2 1341 aa13.18□□□□□ -0.3
CDHR3-203ENST00000466045 WASHC2CQ9Y4E1 1318 aa13.17□□□□□ -0.3
CDHR3-203ENST00000466045 CEP162Q5TB80 1403 aa13.17□□□□□ -0.3
CDHR3-203ENST00000466045 TOPBP1Q92547 1522 aa13.16□□□□□ -0.3
CDHR3-203ENST00000466045 PDIA4P13667 645 aaKnown RBP13.16□□□□□ -0.3
CDHR3-203ENST00000466045 CDK11AQ9UQ88 783 aaPredicted RBP13.16□□□□□ -0.3
CDHR3-203ENST00000466045 RUSC2Q8N2Y8 1516 aa13.16□□□□□ -0.3
CDHR3-203ENST00000466045 SYNJ1O43426 1573 aa13.15□□□□□ -0.3
CDHR3-203ENST00000466045 AAMPQ13685 434 aa13.15□□□□□ -0.3
CDHR3-203ENST00000466045 RTL5Q5HYW3 569 aaPredicted RBP13.15□□□□□ -0.3
CDHR3-203ENST00000466045 GOLGA3Q08378 1498 aa13.14□□□□□ -0.31
CDHR3-203ENST00000466045 DNMBPQ6XZF7 1577 aa13.14□□□□□ -0.31
CDHR3-203ENST00000466045 VSIG10Q8N0Z9 540 aa13.13□□□□□ -0.31
CDHR3-203ENST00000466045 KIF21BO75037 1637 aa13.12□□□□□ -0.31
CDHR3-203ENST00000466045 NBR1Q14596 966 aa13.12□□□□□ -0.31
CDHR3-203ENST00000466045 CUX1P39880 1505 aa13.1□□□□□ -0.31
CDHR3-203ENST00000466045 ITGAEP38570 1179 aa13.09□□□□□ -0.31
CDHR3-203ENST00000466045 POLA1P09884 1462 aaPredicted RBP13.07□□□□□ -0.32
CDHR3-203ENST00000466045 IFT140Q96RY7 1462 aa13.06□□□□□ -0.32
CDHR3-203ENST00000466045 TOP2BQ02880 1626 aa13.06□□□□□ -0.32
CDHR3-203ENST00000466045 RBM10P98175 930 aaKnown RBP13.06□□□□□ -0.32
CDHR3-203ENST00000466045 USP35Q9P2H5 1018 aa13.06□□□□□ -0.32
CDHR3-203ENST00000466045 FGD5Q6ZNL6 1462 aa13.05□□□□□ -0.32
CDHR3-203ENST00000466045 BIVM-ERCC5R4GMW8 1640 aa13.05□□□□□ -0.32
CDHR3-203ENST00000466045 UBTFP17480 764 aaKnown RBP13.05□□□□□ -0.32
CDHR3-203ENST00000466045 PAK3O75914 559 aaPredicted RBP13.04□□□□□ -0.32
CDHR3-203ENST00000466045 RAD54L2Q9Y4B4 1467 aa13.03□□□□□ -0.32
CDHR3-203ENST00000466045 NCBP3Q53F19 620 aaKnown RBP13.02□□□□□ -0.32
CDHR3-203ENST00000466045 TIMELESSQ9UNS1 1208 aa13.02□□□□□ -0.32
CDHR3-203ENST00000466045 ZNF608Q9ULD9 1512 aaPredicted RBP12.99□□□□□ -0.33
CDHR3-203ENST00000466045 FAM43AQ8N2R8 423 aa12.99□□□□□ -0.33
CDHR3-203ENST00000466045 A0A0U1RQG5 324 aaPredicted RBP12.98□□□□□ -0.33
CDHR3-203ENST00000466045 TDRD9Q8NDG6 1382 aaKnown RBP12.97□□□□□ -0.33
CDHR3-203ENST00000466045 RANGAP1P46060 587 aaPredicted RBP12.97□□□□□ -0.33
CDHR3-203ENST00000466045 TARBP1Q13395 1621 aaKnown RBP12.97□□□□□ -0.33
CDHR3-203ENST00000466045 RRP9O43818 475 aaKnown RBP12.96□□□□□ -0.33
CDHR3-203ENST00000466045 ARXQ96QS3 562 aa12.96□□□□□ -0.33
CDHR3-203ENST00000466045 AQRO60306 1485 aaKnown RBP eCLIP12.96□□□□□ -0.33
CDHR3-203ENST00000466045 TAF7LQ5H9L4 462 aa12.96□□□□□ -0.33
CDHR3-203ENST00000466045 BCL11BQ9C0K0 894 aaPredicted RBP12.96□□□□□ -0.33
CDHR3-203ENST00000466045 CLIP1P30622 1438 aa12.95□□□□□ -0.34
CDHR3-203ENST00000466045 IPO9Q96P70 1041 aaKnown RBP12.94□□□□□ -0.34
CDHR3-203ENST00000466045 ABCA10Q8WWZ4 1543 aa12.94□□□□□ -0.34
CDHR3-203ENST00000466045 RAPGEF2Q9Y4G8 1499 aa12.93□□□□□ -0.34
CDHR3-203ENST00000466045 ERICH3Q5RHP9 1530 aa12.93□□□□□ -0.34
CDHR3-203ENST00000466045 BRPF3Q9ULD4 1205 aa12.92□□□□□ -0.34
CDHR3-203ENST00000466045 VPS8Q8N3P4 1428 aa12.91□□□□□ -0.34
CDHR3-203ENST00000466045 KLHL34Q8N239 644 aa12.9□□□□□ -0.34
CDHR3-203ENST00000466045 EIF4G3O43432 1585 aaKnown RBP12.89□□□□□ -0.35
CDHR3-203ENST00000466045 GAPVD1Q14C86 1478 aa12.89□□□□□ -0.35
CDHR3-203ENST00000466045 PRXQ9BXM0 1461 aa12.88□□□□□ -0.35
CDHR3-203ENST00000466045 KCNH8Q96L42 1107 aa12.87□□□□□ -0.35
CDHR3-203ENST00000466045 WDR97A6NE52 1622 aa12.87□□□□□ -0.35
CDHR3-203ENST00000466045 ZBTB47Q9UFB7 747 aaPredicted RBP12.87□□□□□ -0.35
CDHR3-203ENST00000466045 HSP90AA2PQ14568 343 aaPredicted RBP12.86□□□□□ -0.35
CDHR3-203ENST00000466045 GRIN2BQ13224 1484 aa12.86□□□□□ -0.35
CDHR3-203ENST00000466045 NEFMP07197 916 aa12.86□□□□□ -0.35
CDHR3-203ENST00000466045 PPP4R2Q9NY27 417 aa12.85□□□□□ -0.35
CDHR3-203ENST00000466045 ANP32AP39687 249 aaKnown RBP12.85□□□□□ -0.35
CDHR3-203ENST00000466045 FBLN2P98095 1184 aa12.84□□□□□ -0.35
CDHR3-203ENST00000466045 KIF27Q86VH2 1401 aa12.83□□□□□ -0.35
CDHR3-203ENST00000466045 ABCA5Q8WWZ7 1642 aa12.82□□□□□ -0.36
CDHR3-203ENST00000466045 SNAPC4Q5SXM2 1469 aa12.82□□□□□ -0.36
CDHR3-203ENST00000466045 CENPJQ9HC77 1338 aaPredicted RBP12.82□□□□□ -0.36
CDHR3-203ENST00000466045 GSE1Q14687 1217 aa12.81□□□□□ -0.36
CDHR3-203ENST00000466045 CHMP7Q8WUX9 453 aaPredicted RBP12.81□□□□□ -0.36
CDHR3-203ENST00000466045 CCER2I3L3R5 266 aa12.81□□□□□ -0.36
CDHR3-203ENST00000466045 OSCARQ8IYS5 282 aa12.8□□□□□ -0.36
CDHR3-203ENST00000466045 MAGI1Q96QZ7 1491 aaPredicted RBP12.8□□□□□ -0.36
CDHR3-203ENST00000466045 PPM1GO15355 546 aaPredicted RBP12.79□□□□□ -0.36
CDHR3-203ENST00000466045 CALD1Q05682 793 aaKnown RBP12.79□□□□□ -0.36
CDHR3-203ENST00000466045 PRDM4Q9UKN5 801 aa12.79□□□□□ -0.36
CDHR3-203ENST00000466045 IGF1RP08069 1367 aa12.78□□□□□ -0.36
CDHR3-203ENST00000466045 RSPH4AQ5TD94 716 aa12.77□□□□□ -0.37
CDHR3-203ENST00000466045 ARAP1Q96P48 1450 aa12.77□□□□□ -0.37
CDHR3-203ENST00000466045 SYNJ2O15056 1496 aa12.76□□□□□ -0.37
CDHR3-203ENST00000466045 PBRM1Q86U86 1689 aa12.75□□□□□ -0.37
CDHR3-203ENST00000466045 ZNF326Q5BKZ1 582 aaKnown RBP12.75□□□□□ -0.37
CDHR3-203ENST00000466045 DNAJC5Q9H3Z4 198 aa12.75□□□□□ -0.37
CDHR3-203ENST00000466045 FHAD1B1AJZ9 1412 aa12.74□□□□□ -0.37
CDHR3-203ENST00000466045 HSP90AA1P07900 732 aaKnown RBP12.74□□□□□ -0.37
CDHR3-203ENST00000466045 AEBP2Q6ZN18 517 aaPredicted RBP12.71□□□□□ -0.38
CDHR3-203ENST00000466045 CARMIL1Q5VZK9 1371 aa12.7□□□□□ -0.38
CDHR3-203ENST00000466045 ADAMTS12P58397 1594 aa12.69□□□□□ -0.38
CDHR3-203ENST00000466045 GRIN2AQ12879 1464 aa12.68□□□□□ -0.38
CDHR3-203ENST00000466045 CHD1O14646 1710 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms