RNA–Protein interactions for RNA: ENST00000466045.1

CDHR3-203, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 2,358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-203ENST00000466045 NISCHQ9Y2I1 1504 aa18.14■□□□□ 0.49
CDHR3-203ENST00000466045 PELP1Q8IZL8 1130 aaKnown RBP17.09■□□□□ 0.33
CDHR3-203ENST00000466045 MYT1Q01538 1121 aa16.8■□□□□ 0.28
CDHR3-203ENST00000466045 TTBK1Q5TCY1 1321 aaPredicted RBP16.16■□□□□ 0.18
CDHR3-203ENST00000466045 HRCP23327 699 aa16.07■□□□□ 0.16
CDHR3-203ENST00000466045 CCDC180Q9P1Z9 1646 aa15.99■□□□□ 0.15
CDHR3-203ENST00000466045 ABCC9O60706 1549 aa15.63■□□□□ 0.09
CDHR3-203ENST00000466045 SCAF1Q9H7N4 1312 aaKnown RBP15.61■□□□□ 0.09
CDHR3-203ENST00000466045 PRKCSHP14314 528 aaPredicted RBP15.44■□□□□ 0.06
CDHR3-203ENST00000466045 PPARGC1BQ86YN6 1023 aaKnown RBP15.39■□□□□ 0.05
CDHR3-203ENST00000466045 BCL11AQ9H165 835 aa15.26■□□□□ 0.03
CDHR3-203ENST00000466045 ERICH6Q7L0X2 663 aa15.24■□□□□ 0.03
CDHR3-203ENST00000466045 DCAF8L2P0C7V8 631 aa15.24■□□□□ 0.03
CDHR3-203ENST00000466045 APLP2Q06481 763 aa15.21■□□□□ 0.03
CDHR3-203ENST00000466045 ZCCHC6Q5VYS8 1495 aaKnown RBP15.13■□□□□ 0.01
CDHR3-203ENST00000466045 FAM9AQ8IZU1 332 aaPredicted RBP15.06■□□□□ 0
CDHR3-203ENST00000466045 NACADO15069 1562 aa15.06■□□□□ 0
CDHR3-203ENST00000466045 RB1CC1Q8TDY2 1594 aa15.05■□□□□ -0
CDHR3-203ENST00000466045 PCGF6Q9BYE7 350 aa15.03■□□□□ -0
CDHR3-203ENST00000466045 CENPBP07199 599 aaPredicted RBP15.02■□□□□ -0
CDHR3-203ENST00000466045 ACIN1Q9UKV3 1341 aaKnown RBP15.02□□□□□ -0.01
CDHR3-203ENST00000466045 MYO15BQ96JP2 1530 aa15.01□□□□□ -0.01
CDHR3-203ENST00000466045 DCAF1Q9Y4B6 1507 aa15□□□□□ -0.01
CDHR3-203ENST00000466045 SHROOM4Q9ULL8 1493 aa14.94□□□□□ -0.02
CDHR3-203ENST00000466045 ZEB1P37275 1124 aaPredicted RBP14.9□□□□□ -0.02
CDHR3-203ENST00000466045 NEUROD1Q13562 356 aa14.82□□□□□ -0.04
CDHR3-203ENST00000466045 GTF3C3Q9Y5Q9 886 aa14.81□□□□□ -0.04
CDHR3-203ENST00000466045 ANP32EQ9BTT0 268 aa14.71□□□□□ -0.05
CDHR3-203ENST00000466045 SLC24A1O60721 1099 aa14.68□□□□□ -0.06
CDHR3-203ENST00000466045 PABPN1Q86U42 306 aaKnown RBP eCLIP14.68□□□□□ -0.06
CDHR3-203ENST00000466045 SCRIBQ14160 1630 aa14.66□□□□□ -0.06
CDHR3-203ENST00000466045 SUPT5HO00267 1087 aaKnown RBP14.62□□□□□ -0.07
CDHR3-203ENST00000466045 UNC13AQ9UPW8 1703 aa14.61□□□□□ -0.07
CDHR3-203ENST00000466045 BICRAQ9NZM4 1560 aa14.56□□□□□ -0.08
CDHR3-203ENST00000466045 TRIM26Q12899 539 aaPredicted RBP14.54□□□□□ -0.08
CDHR3-203ENST00000466045 CSRNP3Q8WYN3 585 aa14.46□□□□□ -0.1
CDHR3-203ENST00000466045 DAXXQ9UER7 740 aaPredicted RBP14.33□□□□□ -0.12
CDHR3-203ENST00000466045 CHIC1Q5VXU3 224 aa14.29□□□□□ -0.12
CDHR3-203ENST00000466045 DNAJC5BQ9UF47 199 aa14.26□□□□□ -0.13
CDHR3-203ENST00000466045 CLSPNQ9HAW4 1339 aa14.24□□□□□ -0.13
CDHR3-203ENST00000466045 UBE2Q2Q8WVN8 375 aa14.23□□□□□ -0.13
CDHR3-203ENST00000466045 EIF4G1Q04637 1599 aaKnown RBP14.19□□□□□ -0.14
CDHR3-203ENST00000466045 EIF5BO60841 1220 aaKnown RBP14.18□□□□□ -0.14
CDHR3-203ENST00000466045 DIEXFQ68CQ4 756 aaKnown RBP14.18□□□□□ -0.14
CDHR3-203ENST00000466045 TSHZ2Q9NRE2 1034 aa14.17□□□□□ -0.14
CDHR3-203ENST00000466045 CECR2Q9BXF3 1484 aa14.14□□□□□ -0.15
CDHR3-203ENST00000466045 ANO8Q9HCE9 1232 aaPredicted RBP14.1□□□□□ -0.15
CDHR3-203ENST00000466045 CC2D2AQ9P2K1 1620 aa14.1□□□□□ -0.15
CDHR3-203ENST00000466045 RSF1Q96T23 1441 aaPredicted RBP14.06□□□□□ -0.16
CDHR3-203ENST00000466045 BAZ1AQ9NRL2 1556 aaPredicted RBP14.05□□□□□ -0.16
CDHR3-203ENST00000466045 MYT1LQ9UL68 1186 aa14.02□□□□□ -0.16
CDHR3-203ENST00000466045 SMARCA4P51532 1647 aa14.01□□□□□ -0.17
CDHR3-203ENST00000466045 ERICH6BQ5W0A0 696 aa14.01□□□□□ -0.17
CDHR3-203ENST00000466045 TRIM41Q8WV44 630 aa13.99□□□□□ -0.17
CDHR3-203ENST00000466045 MROH2BQ7Z745 1585 aa13.98□□□□□ -0.17
CDHR3-203ENST00000466045 SUPT16HQ9Y5B9 1047 aaKnown RBP13.97□□□□□ -0.17
CDHR3-203ENST00000466045 ATAD2BQ9ULI0 1458 aa13.96□□□□□ -0.17
CDHR3-203ENST00000466045 NCAPD3P42695 1498 aa13.93□□□□□ -0.18
CDHR3-203ENST00000466045 SMARCA2P51531 1590 aa13.92□□□□□ -0.18
CDHR3-203ENST00000466045 PEG3Q9GZU2 1588 aa13.88□□□□□ -0.19
CDHR3-203ENST00000466045 BAZ1BQ9UIG0 1483 aaKnown RBP13.85□□□□□ -0.19
CDHR3-203ENST00000466045 SALL2Q9Y467 1007 aaPredicted RBP13.85□□□□□ -0.19
CDHR3-203ENST00000466045 HMGXB3Q12766 1538 aa13.83□□□□□ -0.19
CDHR3-203ENST00000466045 WIZO95785 1651 aa13.81□□□□□ -0.2
CDHR3-203ENST00000466045 PKNOX2Q96KN3 472 aa13.8□□□□□ -0.2
CDHR3-203ENST00000466045 YTHDC1Q96MU7 727 aaKnown RBP13.8□□□□□ -0.2
CDHR3-203ENST00000466045 LOC105371045A0A1W2PR82 267 aa13.79□□□□□ -0.2
CDHR3-203ENST00000466045 ZNF316A6NFI3 1004 aaPredicted RBP13.75□□□□□ -0.21
CDHR3-203ENST00000466045 PLEKHG5O94827 1062 aa13.74□□□□□ -0.21
CDHR3-203ENST00000466045 RBM19Q9Y4C8 960 aaKnown RBP13.72□□□□□ -0.21
CDHR3-203ENST00000466045 DEKP35659 375 aaKnown RBP13.72□□□□□ -0.21
CDHR3-203ENST00000466045 PODXL2Q9NZ53 605 aa13.69□□□□□ -0.22
CDHR3-203ENST00000466045 MSH5O43196 834 aa13.69□□□□□ -0.22
CDHR3-203ENST00000466045 MIER1Q8N108 512 aa13.68□□□□□ -0.22
CDHR3-203ENST00000466045 TOP2AP11388 1531 aaKnown RBP13.68□□□□□ -0.22
CDHR3-203ENST00000466045 FANCIQ9NVI1 1328 aa13.67□□□□□ -0.22
CDHR3-203ENST00000466045 CCDC136Q96JN2 1154 aa13.66□□□□□ -0.22
CDHR3-203ENST00000466045 CCER1Q8TC90 406 aaPredicted RBP13.65□□□□□ -0.22
CDHR3-203ENST00000466045 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.59□□□□□ -0.23
CDHR3-203ENST00000466045 CADPSQ9ULU8 1353 aa13.56□□□□□ -0.24
CDHR3-203ENST00000466045 CCDC88BA6NC98 1476 aa13.56□□□□□ -0.24
CDHR3-203ENST00000466045 NESP48681 1621 aa13.55□□□□□ -0.24
CDHR3-203ENST00000466045 LAMC3Q9Y6N6 1575 aa13.5□□□□□ -0.25
CDHR3-203ENST00000466045 CFTRP13569 1480 aa13.48□□□□□ -0.25
CDHR3-203ENST00000466045 ERCC6Q03468 1493 aa13.48□□□□□ -0.25
CDHR3-203ENST00000466045 PDS5BQ9NTI5 1447 aa13.47□□□□□ -0.25
CDHR3-203ENST00000466045 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.45□□□□□ -0.26
CDHR3-203ENST00000466045 NEFLP07196 543 aa13.41□□□□□ -0.26
CDHR3-203ENST00000466045 FANCD2Q9BXW9 1451 aa13.38□□□□□ -0.27
CDHR3-203ENST00000466045 IL27Q8NEV9 243 aa13.38□□□□□ -0.27
CDHR3-203ENST00000466045 ABCC8Q09428 1581 aa13.38□□□□□ -0.27
CDHR3-203ENST00000466045 CEP164Q9UPV0 1460 aa13.34□□□□□ -0.27
CDHR3-203ENST00000466045 GLIPR1L2Q4G1C9 344 aa13.34□□□□□ -0.27
CDHR3-203ENST00000466045 C11orf95C9JLR9 678 aaPredicted RBP13.32□□□□□ -0.28
CDHR3-203ENST00000466045 KIF21AQ7Z4S6 1674 aa13.32□□□□□ -0.28
CDHR3-203ENST00000466045 EEA1Q15075 1411 aa13.31□□□□□ -0.28
CDHR3-203ENST00000466045 MRC2Q9UBG0 1479 aa13.29□□□□□ -0.28
CDHR3-203ENST00000466045 FKBP8Q14318 412 aa13.28□□□□□ -0.28
CDHR3-203ENST00000466045 ZMYND15Q9H091 742 aa13.28□□□□□ -0.28
CDHR3-203ENST00000466045 BCANQ96GW7 911 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms