RNA–Protein interactions for RNA: ENST00000465315.1

CCDC115-204, Transcript of coiled-coil domain containing 115, humanhuman

TSL 2

Gene CCDC115, Length 3,562 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC115-204ENST00000465315 CFTRP13569 1480 aa16.25■□□□□ 0.19
CCDC115-204ENST00000465315 FANCD2Q9BXW9 1451 aa16.25■□□□□ 0.19
CCDC115-204ENST00000465315 CNGB1Q14028 1251 aaPredicted RBP16.24■□□□□ 0.19
CCDC115-204ENST00000465315 ARHGAP35Q9NRY4 1499 aa16.23■□□□□ 0.19
CCDC115-204ENST00000465315 TRIM52Q96A61 297 aa16.23■□□□□ 0.19
CCDC115-204ENST00000465315 CHIC2Q9UKJ5 165 aa16.22■□□□□ 0.19
CCDC115-204ENST00000465315 NEFLP07196 543 aa16.21■□□□□ 0.19
CCDC115-204ENST00000465315 PDS5BQ9NTI5 1447 aa16.2■□□□□ 0.18
CCDC115-204ENST00000465315 ERICH3Q5RHP9 1530 aa16.2■□□□□ 0.18
CCDC115-204ENST00000465315 SUPT16HQ9Y5B9 1047 aaKnown RBP16.18■□□□□ 0.18
CCDC115-204ENST00000465315 FHOD3Q2V2M9 1422 aa16.18■□□□□ 0.18
CCDC115-204ENST00000465315 ANP32CO43423 234 aa16.18■□□□□ 0.18
CCDC115-204ENST00000465315 FBLN2P98095 1184 aa16.17■□□□□ 0.18
CCDC115-204ENST00000465315 SETD5Q9C0A6 1442 aa16.16■□□□□ 0.18
CCDC115-204ENST00000465315 MTUS2Q5JR59 1369 aa16.16■□□□□ 0.18
CCDC115-204ENST00000465315 FKBP8Q14318 412 aa16.16■□□□□ 0.18
CCDC115-204ENST00000465315 FGD5Q6ZNL6 1462 aa16.15■□□□□ 0.18
CCDC115-204ENST00000465315 PHLDB1Q86UU1 1377 aa16.15■□□□□ 0.18
CCDC115-204ENST00000465315 TONSLQ96HA7 1378 aa16.15■□□□□ 0.18
CCDC115-204ENST00000465315 RRBP1Q9P2E9 1410 aaKnown RBP16.14■□□□□ 0.17
CCDC115-204ENST00000465315 RRP7BPQ9NSQ0 103 aa16.13■□□□□ 0.17
CCDC115-204ENST00000465315 RAD54L2Q9Y4B4 1467 aa16.12■□□□□ 0.17
CCDC115-204ENST00000465315 BIVM-ERCC5R4GMW8 1640 aa16.12■□□□□ 0.17
CCDC115-204ENST00000465315 POLR3GLQ9BT43 218 aa16.11■□□□□ 0.17
CCDC115-204ENST00000465315 TDRD9Q8NDG6 1382 aaKnown RBP16.11■□□□□ 0.17
CCDC115-204ENST00000465315 FHAD1B1AJZ9 1412 aa16.11■□□□□ 0.17
CCDC115-204ENST00000465315 LRRC9Q6ZRR7 1453 aa16.04■□□□□ 0.16
CCDC115-204ENST00000465315 PPP1R15AO75807 674 aaPredicted RBP16.01■□□□□ 0.15
CCDC115-204ENST00000465315 LAMC3Q9Y6N6 1575 aa16.01■□□□□ 0.15
CCDC115-204ENST00000465315 ZNF326Q5BKZ1 582 aaKnown RBP16■□□□□ 0.15
CCDC115-204ENST00000465315 IRX6P78412 446 aaPredicted RBP16■□□□□ 0.15
CCDC115-204ENST00000465315 HNRNPUQ00839 825 aaKnown RBP eCLIP15.99■□□□□ 0.15
CCDC115-204ENST00000465315 MYT1Q01538 1121 aa15.98■□□□□ 0.15
CCDC115-204ENST00000465315 TIAM1Q13009 1591 aa15.97■□□□□ 0.15
CCDC115-204ENST00000465315 FOXD1Q16676 465 aa15.97■□□□□ 0.15
CCDC115-204ENST00000465315 TOPBP1Q92547 1522 aa15.97■□□□□ 0.15
CCDC115-204ENST00000465315 ZNF777Q9ULD5 760 aaPredicted RBP15.95■□□□□ 0.14
CCDC115-204ENST00000465315 POLA1P09884 1462 aaPredicted RBP15.92■□□□□ 0.14
CCDC115-204ENST00000465315 URB2Q14146 1524 aaKnown RBP15.92■□□□□ 0.14
CCDC115-204ENST00000465315 WDR97A6NE52 1622 aa15.92■□□□□ 0.14
CCDC115-204ENST00000465315 SENP3-EIF4A1A0A087X0R7 540 aa15.91■□□□□ 0.14
CCDC115-204ENST00000465315 FAM9BQ8IZU0 186 aa15.91■□□□□ 0.14
CCDC115-204ENST00000465315 TSHZ2Q9NRE2 1034 aa15.9■□□□□ 0.14
CCDC115-204ENST00000465315 FMN1Q68DA7 1419 aa15.9■□□□□ 0.14
CCDC115-204ENST00000465315 KIF21AQ7Z4S6 1674 aa15.89■□□□□ 0.13
CCDC115-204ENST00000465315 CHMP7Q8WUX9 453 aaPredicted RBP15.89■□□□□ 0.13
CCDC115-204ENST00000465315 PCF11O94913 1555 aaKnown RBP15.88■□□□□ 0.13
CCDC115-204ENST00000465315 MAPKBP1O60336 1514 aa15.88■□□□□ 0.13
CCDC115-204ENST00000465315 ERICH6Q7L0X2 663 aa15.87■□□□□ 0.13
CCDC115-204ENST00000465315 TIMELESSQ9UNS1 1208 aa15.87■□□□□ 0.13
CCDC115-204ENST00000465315 MRC2Q9UBG0 1479 aa15.87■□□□□ 0.13
CCDC115-204ENST00000465315 DNMBPQ6XZF7 1577 aa15.87■□□□□ 0.13
CCDC115-204ENST00000465315 AQRO60306 1485 aaKnown RBP eCLIP15.87■□□□□ 0.135e-7■■■■■ 27.1
CCDC115-204ENST00000465315 FGD6Q6ZV73 1430 aa15.86■□□□□ 0.13
CCDC115-204ENST00000465315 HSPA5P11021 654 aaKnown RBP15.85■□□□□ 0.13
CCDC115-204ENST00000465315 CCDC18Q5T9S5 1454 aa15.84■□□□□ 0.13
CCDC115-204ENST00000465315 EIF4G2P78344 907 aaKnown RBP eCLIP15.84■□□□□ 0.13
CCDC115-204ENST00000465315 CASKIN1Q8WXD9 1431 aa15.83■□□□□ 0.13
CCDC115-204ENST00000465315 SLC4A1APQ9BWU0 796 aaKnown RBP15.82■□□□□ 0.12
CCDC115-204ENST00000465315 CCER2I3L3R5 266 aa15.8■□□□□ 0.12
CCDC115-204ENST00000465315 GAPVD1Q14C86 1478 aa15.79■□□□□ 0.12
CCDC115-204ENST00000465315 FYCO1Q9BQS8 1478 aa15.79■□□□□ 0.12
CCDC115-204ENST00000465315 PRDM2Q13029 1718 aa15.79■□□□□ 0.12
CCDC115-204ENST00000465315 MRS2Q9HD23 443 aa15.79■□□□□ 0.12
CCDC115-204ENST00000465315 MPHOSPH9Q99550 1183 aa15.78■□□□□ 0.12
CCDC115-204ENST00000465315 L3MBTL2Q969R5 705 aa15.78■□□□□ 0.12
CCDC115-204ENST00000465315 NCOA2Q15596 1464 aa15.76■□□□□ 0.11
CCDC115-204ENST00000465315 ABCA10Q8WWZ4 1543 aa15.76■□□□□ 0.11
CCDC115-204ENST00000465315 CDK11AQ9UQ88 783 aaPredicted RBP15.75■□□□□ 0.11
CCDC115-204ENST00000465315 PTPRKQ15262 1439 aa15.75■□□□□ 0.11
CCDC115-204ENST00000465315 MAP3K1Q13233 1512 aa15.75■□□□□ 0.11
CCDC115-204ENST00000465315 MYOM3Q5VTT5 1437 aa15.74■□□□□ 0.11
CCDC115-204ENST00000465315 ZNF608Q9ULD9 1512 aaPredicted RBP15.74■□□□□ 0.11
CCDC115-204ENST00000465315 ZNF644Q9H582 1327 aaPredicted RBP15.74■□□□□ 0.11
CCDC115-204ENST00000465315 UACAQ9BZF9 1416 aa15.73■□□□□ 0.11
CCDC115-204ENST00000465315 KDM2AQ9Y2K7 1162 aa15.72■□□□□ 0.11
CCDC115-204ENST00000465315 CFDP1Q9UEE9 299 aaPredicted RBP15.71■□□□□ 0.1
CCDC115-204ENST00000465315 EFCAB5A4FU69 1503 aa15.69■□□□□ 0.1
CCDC115-204ENST00000465315 NAIPQ13075 1403 aa15.69■□□□□ 0.1
CCDC115-204ENST00000465315 WASHC2AQ641Q2 1341 aa15.68■□□□□ 0.1
CCDC115-204ENST00000465315 RBM19Q9Y4C8 960 aaKnown RBP15.68■□□□□ 0.1
CCDC115-204ENST00000465315 HFM1A2PYH4 1435 aa15.68■□□□□ 0.1
CCDC115-204ENST00000465315 SALL2Q9Y467 1007 aaPredicted RBP15.66■□□□□ 0.1
CCDC115-204ENST00000465315 CCDC184Q52MB2 194 aa15.66■□□□□ 0.1
CCDC115-204ENST00000465315 IFT140Q96RY7 1462 aa15.65■□□□□ 0.1
CCDC115-204ENST00000465315 ANP32EQ9BTT0 268 aa15.65■□□□□ 0.1
CCDC115-204ENST00000465315 B4GALNT3Q6L9W6 998 aa15.62■□□□□ 0.09
CCDC115-204ENST00000465315 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.62■□□□□ 0.09
CCDC115-204ENST00000465315 GRIN2BQ13224 1484 aa15.61■□□□□ 0.09
CCDC115-204ENST00000465315 CDK13Q14004 1512 aaKnown RBP15.6■□□□□ 0.09
CCDC115-204ENST00000465315 C11orf95C9JLR9 678 aaPredicted RBP15.6■□□□□ 0.09
CCDC115-204ENST00000465315 CFAP43Q8NDM7 1665 aa15.6■□□□□ 0.09
CCDC115-204ENST00000465315 SNAPC4Q5SXM2 1469 aa15.6■□□□□ 0.09
CCDC115-204ENST00000465315 NBPF8Q3BBV2 869 aa15.6■□□□□ 0.09
CCDC115-204ENST00000465315 PKD2Q13563 968 aa15.59■□□□□ 0.09
CCDC115-204ENST00000465315 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.59■□□□□ 0.09
CCDC115-204ENST00000465315 CUL7Q14999 1698 aa15.57■□□□□ 0.08
CCDC115-204ENST00000465315 PRKRIP1Q9H875 184 aaPredicted RBP15.57■□□□□ 0.08
CCDC115-204ENST00000465315 PTPN23Q9H3S7 1636 aa15.56■□□□□ 0.08
CCDC115-204ENST00000465315 RGL3Q3MIN7 710 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms