RNA–Protein interactions for RNA: ENST00000465315.1

CCDC115-204, Transcript of coiled-coil domain containing 115, humanhuman

TSL 2

Gene CCDC115, Length 3,562 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC115-204ENST00000465315 NISCHQ9Y2I1 1504 aa22.44■■□□□ 1.18
CCDC115-204ENST00000465315 SHROOM4Q9ULL8 1493 aa20.14■□□□□ 0.81
CCDC115-204ENST00000465315 DCAF8L2P0C7V8 631 aa19.92■□□□□ 0.78
CCDC115-204ENST00000465315 SUPT5HO00267 1087 aaKnown RBP19.91■□□□□ 0.78
CCDC115-204ENST00000465315 CCDC180Q9P1Z9 1646 aa18.97■□□□□ 0.63
CCDC115-204ENST00000465315 CHIC1Q5VXU3 224 aa18.91■□□□□ 0.62
CCDC115-204ENST00000465315 ZCCHC6Q5VYS8 1495 aaKnown RBP18.88■□□□□ 0.61
CCDC115-204ENST00000465315 ABCC9O60706 1549 aa18.86■□□□□ 0.61
CCDC115-204ENST00000465315 PCGF6Q9BYE7 350 aa18.83■□□□□ 0.6
CCDC115-204ENST00000465315 EHMT2Q96KQ7 1210 aa18.69■□□□□ 0.58
CCDC115-204ENST00000465315 LOC105371045A0A1W2PR82 267 aa18.65■□□□□ 0.58
CCDC115-204ENST00000465315 MYO15BQ96JP2 1530 aa18.6■□□□□ 0.57
CCDC115-204ENST00000465315 FAM9AQ8IZU1 332 aaPredicted RBP18.55■□□□□ 0.56
CCDC115-204ENST00000465315 HRCP23327 699 aa18.5■□□□□ 0.55
CCDC115-204ENST00000465315 PPARGC1BQ86YN6 1023 aaKnown RBP18.42■□□□□ 0.54
CCDC115-204ENST00000465315 TRIM41Q8WV44 630 aa18.35■□□□□ 0.53
CCDC115-204ENST00000465315 TRIM26Q12899 539 aaPredicted RBP18.13■□□□□ 0.49
CCDC115-204ENST00000465315 SCRIBQ14160 1630 aa18.11■□□□□ 0.49
CCDC115-204ENST00000465315 TTBK1Q5TCY1 1321 aaPredicted RBP18.05■□□□□ 0.48
CCDC115-204ENST00000465315 PABPN1Q86U42 306 aaKnown RBP eCLIP18.05■□□□□ 0.48
CCDC115-204ENST00000465315 DCAF1Q9Y4B6 1507 aa18.02■□□□□ 0.48
CCDC115-204ENST00000465315 RSF1Q96T23 1441 aaPredicted RBP17.95■□□□□ 0.46
CCDC115-204ENST00000465315 NACADO15069 1562 aa17.9■□□□□ 0.46
CCDC115-204ENST00000465315 RB1CC1Q8TDY2 1594 aa17.89■□□□□ 0.46
CCDC115-204ENST00000465315 ZEB1P37275 1124 aaPredicted RBP17.75■□□□□ 0.43
CCDC115-204ENST00000465315 CECR2Q9BXF3 1484 aa17.74■□□□□ 0.43
CCDC115-204ENST00000465315 CCER1Q8TC90 406 aaPredicted RBP17.71■□□□□ 0.43
CCDC115-204ENST00000465315 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.68■□□□□ 0.42
CCDC115-204ENST00000465315 UBTFP17480 764 aaKnown RBP17.64■□□□□ 0.41
CCDC115-204ENST00000465315 RANGAP1P46060 587 aaPredicted RBP17.64■□□□□ 0.41
CCDC115-204ENST00000465315 MROH2BQ7Z745 1585 aa17.57■□□□□ 0.4
CCDC115-204ENST00000465315 WIZO95785 1651 aa17.44■□□□□ 0.38
CCDC115-204ENST00000465315 APLP2Q06481 763 aa17.34■□□□□ 0.37
CCDC115-204ENST00000465315 HNRNPUL2Q1KMD3 747 aaKnown RBP17.34■□□□□ 0.37
CCDC115-204ENST00000465315 CSRNP3Q8WYN3 585 aa17.31■□□□□ 0.36
CCDC115-204ENST00000465315 ABCC8Q09428 1581 aa17.28■□□□□ 0.36
CCDC115-204ENST00000465315 UNC13AQ9UPW8 1703 aa17.26■□□□□ 0.35
CCDC115-204ENST00000465315 BAZ1AQ9NRL2 1556 aaPredicted RBP17.24■□□□□ 0.35
CCDC115-204ENST00000465315 YTHDC1Q96MU7 727 aaKnown RBP17.24■□□□□ 0.35
CCDC115-204ENST00000465315 CCDC88BA6NC98 1476 aa17.24■□□□□ 0.35
CCDC115-204ENST00000465315 DIEXFQ68CQ4 756 aaKnown RBP17.23■□□□□ 0.35
CCDC115-204ENST00000465315 SOGA1O94964 1423 aa17.23■□□□□ 0.35
CCDC115-204ENST00000465315 SCAF1Q9H7N4 1312 aaKnown RBP17.18■□□□□ 0.34
CCDC115-204ENST00000465315 CEP162Q5TB80 1403 aa17.17■□□□□ 0.34
CCDC115-204ENST00000465315 BICRAQ9NZM4 1560 aa17.17■□□□□ 0.34
CCDC115-204ENST00000465315 CENPBP07199 599 aaPredicted RBP17.13■□□□□ 0.33
CCDC115-204ENST00000465315 RUSC2Q8N2Y8 1516 aa17.09■□□□□ 0.33
CCDC115-204ENST00000465315 NEUROD1Q13562 356 aa17.04■□□□□ 0.32
CCDC115-204ENST00000465315 TOP2AP11388 1531 aaKnown RBP17.04■□□□□ 0.32
CCDC115-204ENST00000465315 ITGAEP38570 1179 aa17.03■□□□□ 0.32
CCDC115-204ENST00000465315 TNIKQ9UKE5 1360 aa17.02■□□□□ 0.32
CCDC115-204ENST00000465315 ACIN1Q9UKV3 1341 aaKnown RBP17.01■□□□□ 0.31
CCDC115-204ENST00000465315 WRNQ14191 1432 aaPredicted RBP eCLIP17.01■□□□□ 0.31
CCDC115-204ENST00000465315 SMARCA4P51532 1647 aa17.01■□□□□ 0.31
CCDC115-204ENST00000465315 GTF3C3Q9Y5Q9 886 aa17■□□□□ 0.31
CCDC115-204ENST00000465315 ZNF316A6NFI3 1004 aaPredicted RBP16.97■□□□□ 0.31
CCDC115-204ENST00000465315 SMARCA2P51531 1590 aa16.96■□□□□ 0.31
CCDC115-204ENST00000465315 ATP1B4Q9UN42 357 aaPredicted RBP16.95■□□□□ 0.3
CCDC115-204ENST00000465315 GOLGA3Q08378 1498 aa16.94■□□□□ 0.3
CCDC115-204ENST00000465315 BAZ1BQ9UIG0 1483 aaKnown RBP16.93■□□□□ 0.3
CCDC115-204ENST00000465315 CLIP1P30622 1438 aa16.91■□□□□ 0.3
CCDC115-204ENST00000465315 EEA1Q15075 1411 aa16.89■□□□□ 0.29
CCDC115-204ENST00000465315 PELP1Q8IZL8 1130 aaKnown RBP16.87■□□□□ 0.29
CCDC115-204ENST00000465315 EIF4G1Q04637 1599 aaKnown RBP16.86■□□□□ 0.29
CCDC115-204ENST00000465315 ATAD2BQ9ULI0 1458 aa16.85■□□□□ 0.29
CCDC115-204ENST00000465315 CEP164Q9UPV0 1460 aa16.8■□□□□ 0.28
CCDC115-204ENST00000465315 MIER1Q8N108 512 aa16.8■□□□□ 0.28
CCDC115-204ENST00000465315 RAPGEF2Q9Y4G8 1499 aa16.73■□□□□ 0.27
CCDC115-204ENST00000465315 P3H3Q8IVL6 736 aa16.72■□□□□ 0.27
CCDC115-204ENST00000465315 DNAJC5BQ9UF47 199 aa16.69■□□□□ 0.26
CCDC115-204ENST00000465315 VPS8Q8N3P4 1428 aa16.68■□□□□ 0.26
CCDC115-204ENST00000465315 KANK4Q5T7N3 995 aaPredicted RBP16.67■□□□□ 0.26
CCDC115-204ENST00000465315 CC2D2AQ9P2K1 1620 aa16.67■□□□□ 0.26
CCDC115-204ENST00000465315 SYNJ1O43426 1573 aa16.67■□□□□ 0.26
CCDC115-204ENST00000465315 FAM50AQ14320 339 aaKnown RBP16.66■□□□□ 0.26
CCDC115-204ENST00000465315 NCAPD3P42695 1498 aa16.59■□□□□ 0.25
CCDC115-204ENST00000465315 KIF27Q86VH2 1401 aa16.51■□□□□ 0.23
CCDC115-204ENST00000465315 KIF21BO75037 1637 aa16.48■□□□□ 0.23
CCDC115-204ENST00000465315 PEG3Q9GZU2 1588 aa16.47■□□□□ 0.23
CCDC115-204ENST00000465315 HIRIP3Q9BW71 556 aaPredicted RBP16.45■□□□□ 0.22
CCDC115-204ENST00000465315 HMGXB3Q12766 1538 aa16.44■□□□□ 0.22
CCDC115-204ENST00000465315 CUX2O14529 1486 aa16.41■□□□□ 0.22
CCDC115-204ENST00000465315 CADPSQ9ULU8 1353 aa16.41■□□□□ 0.22
CCDC115-204ENST00000465315 DHX57Q6P158 1386 aaKnown RBP16.4■□□□□ 0.22
CCDC115-204ENST00000465315 NESP48681 1621 aa16.4■□□□□ 0.22
CCDC115-204ENST00000465315 CCNB3Q8WWL7 1395 aa16.39■□□□□ 0.21
CCDC115-204ENST00000465315 BCANQ96GW7 911 aa16.39■□□□□ 0.21
CCDC115-204ENST00000465315 SIN3AQ96ST3 1273 aa16.39■□□□□ 0.21
CCDC115-204ENST00000465315 DDX10Q13206 875 aaKnown RBP16.39■□□□□ 0.21
CCDC115-204ENST00000465315 ARAP1Q96P48 1450 aa16.37■□□□□ 0.21
CCDC115-204ENST00000465315 ARID3CA6NKF2 412 aa16.37■□□□□ 0.21
CCDC115-204ENST00000465315 TOP2BQ02880 1626 aa16.33■□□□□ 0.21
CCDC115-204ENST00000465315 CARMIL1Q5VZK9 1371 aa16.33■□□□□ 0.21
CCDC115-204ENST00000465315 PRXQ9BXM0 1461 aa16.31■□□□□ 0.2
CCDC115-204ENST00000465315 CUX1P39880 1505 aa16.3■□□□□ 0.2
CCDC115-204ENST00000465315 CLSPNQ9HAW4 1339 aa16.29■□□□□ 0.2
CCDC115-204ENST00000465315 RAB3GAP2Q9H2M9 1393 aa16.29■□□□□ 0.2
CCDC115-204ENST00000465315 KCNH8Q96L42 1107 aa16.28■□□□□ 0.2
CCDC115-204ENST00000465315 ERCC6Q03468 1493 aa16.26■□□□□ 0.19
CCDC115-204ENST00000465315 IGF1RP08069 1367 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms