RNA–Protein interactions for RNA: ENST00000464984.1

SVIL-206, Transcript of supervillin, humanhuman

TSL 3

Gene SVIL, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIL-206ENST00000464984 PDS5BQ9NTI5 1447 aa13.29□□□□□ -0.28
SVIL-206ENST00000464984 LAMC3Q9Y6N6 1575 aa13.26□□□□□ -0.29
SVIL-206ENST00000464984 PRKAR2AP13861 404 aaKnown RBP13.23□□□□□ -0.29
SVIL-206ENST00000464984 TRIM41Q8WV44 630 aa13.21□□□□□ -0.29
SVIL-206ENST00000464984 NESP48681 1621 aa13.2□□□□□ -0.3
SVIL-206ENST00000464984 SPDYE4A6NLX3 237 aa13.18□□□□□ -0.3
SVIL-206ENST00000464984 HAX1O00165 279 aa13.18□□□□□ -0.3
SVIL-206ENST00000464984 CHADLQ6NUI6 762 aa13.18□□□□□ -0.3
SVIL-206ENST00000464984 FANCD2Q9BXW9 1451 aa13.17□□□□□ -0.3
SVIL-206ENST00000464984 PRR29P0C7W0 189 aa13.15□□□□□ -0.3
SVIL-206ENST00000464984 ERCC6Q03468 1493 aa13.14□□□□□ -0.31
SVIL-206ENST00000464984 CEP164Q9UPV0 1460 aa13.13□□□□□ -0.31
SVIL-206ENST00000464984 EVX2Q03828 476 aa13.12□□□□□ -0.31
SVIL-206ENST00000464984 SP7Q8TDD2 431 aaPredicted RBP13.12□□□□□ -0.31
SVIL-206ENST00000464984 WRNQ14191 1432 aaPredicted RBP eCLIP13.12□□□□□ -0.31
SVIL-206ENST00000464984 ABCC8Q09428 1581 aa13.11□□□□□ -0.31
SVIL-206ENST00000464984 PRDM2Q13029 1718 aa13.07□□□□□ -0.32
SVIL-206ENST00000464984 MRC2Q9UBG0 1479 aa13.02□□□□□ -0.33
SVIL-206ENST00000464984 DNMBPQ6XZF7 1577 aa12.97□□□□□ -0.33
SVIL-206ENST00000464984 TOPBP1Q92547 1522 aa12.97□□□□□ -0.33
SVIL-206ENST00000464984 KIF21AQ7Z4S6 1674 aa12.96□□□□□ -0.33
SVIL-206ENST00000464984 TOP2BQ02880 1626 aa12.96□□□□□ -0.33
SVIL-206ENST00000464984 C19orf67A6NJJ6 358 aa12.96□□□□□ -0.33
SVIL-206ENST00000464984 CUX1P39880 1505 aa12.96□□□□□ -0.33
SVIL-206ENST00000464984 URB2Q14146 1524 aaKnown RBP12.95□□□□□ -0.34
SVIL-206ENST00000464984 SOGA1O94964 1423 aa12.95□□□□□ -0.34
SVIL-206ENST00000464984 SYNJ1O43426 1573 aa12.92□□□□□ -0.34
SVIL-206ENST00000464984 CREBZFQ9NS37 354 aa12.91□□□□□ -0.34
SVIL-206ENST00000464984 STAG3Q9UJ98 1225 aa12.91□□□□□ -0.34
SVIL-206ENST00000464984 FARP1Q9Y4F1 1045 aaPredicted RBP12.91□□□□□ -0.34
SVIL-206ENST00000464984 BIVM-ERCC5R4GMW8 1640 aa12.91□□□□□ -0.34
SVIL-206ENST00000464984 FGD5Q6ZNL6 1462 aa12.91□□□□□ -0.34
SVIL-206ENST00000464984 WDR62O43379 1518 aa12.9□□□□□ -0.34
SVIL-206ENST00000464984 POLA1P09884 1462 aaPredicted RBP12.88□□□□□ -0.35
SVIL-206ENST00000464984 EEA1Q15075 1411 aa12.88□□□□□ -0.35
SVIL-206ENST00000464984 FAM9AQ8IZU1 332 aaPredicted RBP12.87□□□□□ -0.35
SVIL-206ENST00000464984 KIF27Q86VH2 1401 aa12.87□□□□□ -0.35
SVIL-206ENST00000464984 IFT140Q96RY7 1462 aa12.86□□□□□ -0.35
SVIL-206ENST00000464984 PROM2Q8N271 834 aa12.86□□□□□ -0.35
SVIL-206ENST00000464984 THOC2Q8NI27 1593 aaKnown RBP12.84□□□□□ -0.35
SVIL-206ENST00000464984 RAD54L2Q9Y4B4 1467 aa12.84□□□□□ -0.35
SVIL-206ENST00000464984 CUX2O14529 1486 aa12.83□□□□□ -0.36
SVIL-206ENST00000464984 ABCA10Q8WWZ4 1543 aa12.82□□□□□ -0.36
SVIL-206ENST00000464984 CD44P16070 742 aaKnown RBP12.81□□□□□ -0.36
SVIL-206ENST00000464984 TDRD9Q8NDG6 1382 aaKnown RBP12.8□□□□□ -0.36
SVIL-206ENST00000464984 GAPVD1Q14C86 1478 aa12.76□□□□□ -0.37
SVIL-206ENST00000464984 GABBR2O75899 941 aa12.75□□□□□ -0.37
SVIL-206ENST00000464984 IGF1RP08069 1367 aa12.75□□□□□ -0.37
SVIL-206ENST00000464984 AQRO60306 1485 aaKnown RBP eCLIP12.73□□□□□ -0.37
SVIL-206ENST00000464984 FKBP8Q14318 412 aa12.73□□□□□ -0.37
SVIL-206ENST00000464984 WDR97A6NE52 1622 aa12.73□□□□□ -0.37
SVIL-206ENST00000464984 TARBP1Q13395 1621 aaKnown RBP12.73□□□□□ -0.37
SVIL-206ENST00000464984 RUSC2Q8N2Y8 1516 aa12.72□□□□□ -0.37
SVIL-206ENST00000464984 CARMIL1Q5VZK9 1371 aa12.71□□□□□ -0.37
SVIL-206ENST00000464984 UBTFP17480 764 aaKnown RBP12.71□□□□□ -0.37
SVIL-206ENST00000464984 MNX1P50219 401 aaPredicted RBP12.71□□□□□ -0.37
SVIL-206ENST00000464984 GRIN2BQ13224 1484 aa12.71□□□□□ -0.38
SVIL-206ENST00000464984 CHMP7Q8WUX9 453 aaPredicted RBP12.69□□□□□ -0.38
SVIL-206ENST00000464984 ZNF608Q9ULD9 1512 aaPredicted RBP12.68□□□□□ -0.38
SVIL-206ENST00000464984 ERICH3Q5RHP9 1530 aa12.67□□□□□ -0.38
SVIL-206ENST00000464984 LOC105371045A0A1W2PR82 267 aa12.66□□□□□ -0.38
SVIL-206ENST00000464984 ZRANB1Q9UGI0 708 aa12.66□□□□□ -0.38
SVIL-206ENST00000464984 FHAD1B1AJZ9 1412 aa12.64□□□□□ -0.39
SVIL-206ENST00000464984 RAPGEF2Q9Y4G8 1499 aa12.64□□□□□ -0.39
SVIL-206ENST00000464984 ABCA5Q8WWZ7 1642 aa12.63□□□□□ -0.39
SVIL-206ENST00000464984 MAGI1Q96QZ7 1491 aaPredicted RBP12.62□□□□□ -0.39
SVIL-206ENST00000464984 PRXQ9BXM0 1461 aa12.62□□□□□ -0.39
SVIL-206ENST00000464984 GOLGA3Q08378 1498 aa12.6□□□□□ -0.39
SVIL-206ENST00000464984 EIF4G3O43432 1585 aaKnown RBP12.6□□□□□ -0.39
SVIL-206ENST00000464984 ZNF579Q8NAF0 562 aaKnown RBP12.59□□□□□ -0.39
SVIL-206ENST00000464984 SNAPC4Q5SXM2 1469 aa12.59□□□□□ -0.39
SVIL-206ENST00000464984 CUL7Q14999 1698 aa12.58□□□□□ -0.4
SVIL-206ENST00000464984 NPM1P06748 294 aaKnown RBP eCLIP12.57□□□□□ -0.4
SVIL-206ENST00000464984 TNIKQ9UKE5 1360 aa12.56□□□□□ -0.4
SVIL-206ENST00000464984 KIF21BO75037 1637 aa12.56□□□□□ -0.4
SVIL-206ENST00000464984 PHF12Q96QT6 1004 aa12.56□□□□□ -0.4
SVIL-206ENST00000464984 SYNJ2O15056 1496 aa12.56□□□□□ -0.4
SVIL-206ENST00000464984 POTEIP0CG38 1075 aa12.54□□□□□ -0.4
SVIL-206ENST00000464984 MIER1Q8N108 512 aa12.54□□□□□ -0.4
SVIL-206ENST00000464984 PBRM1Q86U86 1689 aa12.54□□□□□ -0.4
SVIL-206ENST00000464984 PAK3O75914 559 aaPredicted RBP12.51□□□□□ -0.41
SVIL-206ENST00000464984 GALR2O43603 387 aaPredicted RBP12.5□□□□□ -0.41
SVIL-206ENST00000464984 GRIN2AQ12879 1464 aa12.5□□□□□ -0.41
SVIL-206ENST00000464984 ADAMTS12P58397 1594 aa12.49□□□□□ -0.41
SVIL-206ENST00000464984 RANGAP1P46060 587 aaPredicted RBP12.49□□□□□ -0.41
SVIL-206ENST00000464984 TSPYL2Q9H2G4 693 aaPredicted RBP12.48□□□□□ -0.41
SVIL-206ENST00000464984 PLCD3Q8N3E9 789 aa12.47□□□□□ -0.41
SVIL-206ENST00000464984 JPH4Q96JJ6 628 aa12.47□□□□□ -0.41
SVIL-206ENST00000464984 KIAA0586Q9BVV6 1533 aa12.46□□□□□ -0.42
SVIL-206ENST00000464984 NUP160Q12769 1436 aa12.43□□□□□ -0.42
SVIL-206ENST00000464984 PLEKHG5O94827 1062 aa12.42□□□□□ -0.42
SVIL-206ENST00000464984 CLIP1P30622 1438 aa12.41□□□□□ -0.42
SVIL-206ENST00000464984 CLCN6P51797 869 aa12.41□□□□□ -0.42
SVIL-206ENST00000464984 RASEFQ8IZ41 740 aa12.41□□□□□ -0.42
SVIL-206ENST00000464984 CEP162Q5TB80 1403 aa12.4□□□□□ -0.42
SVIL-206ENST00000464984 DCBLD2Q96PD2 775 aa12.4□□□□□ -0.42
SVIL-206ENST00000464984 CARMIL2Q6F5E8 1435 aa12.39□□□□□ -0.43
SVIL-206ENST00000464984 P3H3Q8IVL6 736 aa12.38□□□□□ -0.43
SVIL-206ENST00000464984 MS4A3Q96HJ5 214 aa12.37□□□□□ -0.43
SVIL-206ENST00000464984 CCDC61Q9Y6R9 512 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms