RNA–Protein interactions for RNA: ENST00000464611.1

ACTB-208, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 715 nt, Biotype processed transcript, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-208ENST00000464611 UBTFP17480 764 aaKnown RBP13.04□□□□□ -0.32
ACTB-208ENST00000464611 PBRM1Q86U86 1689 aa13.03□□□□□ -0.32
ACTB-208ENST00000464611 PPARGC1BQ86YN6 1023 aaKnown RBP13.02□□□□□ -0.33
ACTB-208ENST00000464611 CNKSR2Q8WXI2 1034 aa13.02□□□□□ -0.33
ACTB-208ENST00000464611 ZNF608Q9ULD9 1512 aaPredicted RBP13.02□□□□□ -0.33
ACTB-208ENST00000464611 KIF27Q86VH2 1401 aa13□□□□□ -0.33
ACTB-208ENST00000464611 GAPVD1Q14C86 1478 aa12.99□□□□□ -0.33
ACTB-208ENST00000464611 EHMT2Q96KQ7 1210 aa12.98□□□□□ -0.33
ACTB-208ENST00000464611 GRIN2BQ13224 1484 aa12.97□□□□□ -0.33
ACTB-208ENST00000464611 ERICH3Q5RHP9 1530 aa12.97□□□□□ -0.33
ACTB-208ENST00000464611 RUSC2Q8N2Y8 1516 aa12.96□□□□□ -0.33
ACTB-208ENST00000464611 TDRD9Q8NDG6 1382 aaKnown RBP12.95□□□□□ -0.34
ACTB-208ENST00000464611 AQRO60306 1485 aaKnown RBP eCLIP12.95□□□□□ -0.345e-22■■■■□ 25.2
ACTB-208ENST00000464611 MAGI1Q96QZ7 1491 aaPredicted RBP12.95□□□□□ -0.34
ACTB-208ENST00000464611 CUL7Q14999 1698 aa12.95□□□□□ -0.34
ACTB-208ENST00000464611 ADAMTS12P58397 1594 aa12.93□□□□□ -0.34
ACTB-208ENST00000464611 CLIP1P30622 1438 aa12.92□□□□□ -0.34
ACTB-208ENST00000464611 SNAPC4Q5SXM2 1469 aa12.91□□□□□ -0.34
ACTB-208ENST00000464611 APLP2Q06481 763 aa12.9□□□□□ -0.34
ACTB-208ENST00000464611 CCER1Q8TC90 406 aaPredicted RBP12.9□□□□□ -0.34
ACTB-208ENST00000464611 VPS8Q8N3P4 1428 aa12.89□□□□□ -0.35
ACTB-208ENST00000464611 SYNJ2O15056 1496 aa12.87□□□□□ -0.35
ACTB-208ENST00000464611 PRXQ9BXM0 1461 aa12.86□□□□□ -0.35
ACTB-208ENST00000464611 FHAD1B1AJZ9 1412 aa12.86□□□□□ -0.35
ACTB-208ENST00000464611 CHD1O14646 1710 aa12.85□□□□□ -0.35
ACTB-208ENST00000464611 RAPGEF2Q9Y4G8 1499 aa12.82□□□□□ -0.36
ACTB-208ENST00000464611 IGF1RP08069 1367 aa12.81□□□□□ -0.36
ACTB-208ENST00000464611 GRIN2AQ12879 1464 aa12.81□□□□□ -0.36
ACTB-208ENST00000464611 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.8□□□□□ -0.36
ACTB-208ENST00000464611 CARMIL1Q5VZK9 1371 aa12.79□□□□□ -0.36
ACTB-208ENST00000464611 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.77□□□□□ -0.37
ACTB-208ENST00000464611 CHMP7Q8WUX9 453 aaPredicted RBP12.76□□□□□ -0.37
ACTB-208ENST00000464611 CLSPNQ9HAW4 1339 aa12.75□□□□□ -0.37
ACTB-208ENST00000464611 CTTNBP2Q8WZ74 1663 aa12.73□□□□□ -0.37
ACTB-208ENST00000464611 CEP170Q5SW79 1584 aa12.73□□□□□ -0.37
ACTB-208ENST00000464611 NUP160Q12769 1436 aa12.73□□□□□ -0.37
ACTB-208ENST00000464611 FBLN2P98095 1184 aa12.73□□□□□ -0.37
ACTB-208ENST00000464611 CLASP1Q7Z460 1538 aa12.71□□□□□ -0.38
ACTB-208ENST00000464611 MAP3K1Q13233 1512 aa12.69□□□□□ -0.38
ACTB-208ENST00000464611 IQGAP2Q13576 1575 aa12.68□□□□□ -0.38
ACTB-208ENST00000464611 OSCARQ8IYS5 282 aa12.67□□□□□ -0.38
ACTB-208ENST00000464611 KIAA0586Q9BVV6 1533 aa12.67□□□□□ -0.38
ACTB-208ENST00000464611 ARAP1Q96P48 1450 aa12.65□□□□□ -0.38
ACTB-208ENST00000464611 SHROOM2Q13796 1616 aa12.64□□□□□ -0.39
ACTB-208ENST00000464611 ZNF316A6NFI3 1004 aaPredicted RBP12.62□□□□□ -0.39
ACTB-208ENST00000464611 DSG3P32926 999 aa12.62□□□□□ -0.39
ACTB-208ENST00000464611 RRBP1Q9P2E9 1410 aaKnown RBP12.61□□□□□ -0.39
ACTB-208ENST00000464611 DIEXFQ68CQ4 756 aaKnown RBP12.6□□□□□ -0.39
ACTB-208ENST00000464611 UGGT2Q9NYU1 1516 aa12.59□□□□□ -0.39
ACTB-208ENST00000464611 ARHGAP35Q9NRY4 1499 aa12.59□□□□□ -0.39
ACTB-208ENST00000464611 TTBK1Q5TCY1 1321 aaPredicted RBP12.58□□□□□ -0.4
ACTB-208ENST00000464611 EFCAB5A4FU69 1503 aa12.57□□□□□ -0.4
ACTB-208ENST00000464611 HNRNPUL2Q1KMD3 747 aaKnown RBP12.57□□□□□ -0.4
ACTB-208ENST00000464611 CENPBP07199 599 aaPredicted RBP12.56□□□□□ -0.4
ACTB-208ENST00000464611 KIAA0556O60303 1618 aa12.55□□□□□ -0.4
ACTB-208ENST00000464611 CARMIL2Q6F5E8 1435 aa12.55□□□□□ -0.4
ACTB-208ENST00000464611 SAMD9Q5K651 1589 aa12.55□□□□□ -0.4
ACTB-208ENST00000464611 ARHGEF11O15085 1522 aa12.54□□□□□ -0.4
ACTB-208ENST00000464611 CAPN15O75808 1086 aa12.53□□□□□ -0.4
ACTB-208ENST00000464611 PRG4Q92954 1404 aaPredicted RBP12.53□□□□□ -0.4
ACTB-208ENST00000464611 RIMBP3CA6NJZ7 1639 aa12.52□□□□□ -0.4
ACTB-208ENST00000464611 RIMBP3BA6NNM3 1639 aa12.52□□□□□ -0.4
ACTB-208ENST00000464611 RIMBP3Q9UFD9 1639 aa12.52□□□□□ -0.4
ACTB-208ENST00000464611 CCNB3Q8WWL7 1395 aa12.52□□□□□ -0.41
ACTB-208ENST00000464611 JPH4Q96JJ6 628 aa12.51□□□□□ -0.41
ACTB-208ENST00000464611 DISP1Q96F81 1524 aa12.51□□□□□ -0.41
ACTB-208ENST00000464611 SPINK5Q9NQ38 1064 aaPredicted RBP12.5□□□□□ -0.41
ACTB-208ENST00000464611 TIAM1Q13009 1591 aa12.49□□□□□ -0.41
ACTB-208ENST00000464611 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.49□□□□□ -0.41
ACTB-208ENST00000464611 RANGAP1P46060 587 aaPredicted RBP12.49□□□□□ -0.41
ACTB-208ENST00000464611 ERCC6L2Q5T890 1561 aa12.48□□□□□ -0.41
ACTB-208ENST00000464611 KANK4Q5T7N3 995 aaPredicted RBP12.48□□□□□ -0.41
ACTB-208ENST00000464611 PELP1Q8IZL8 1130 aaKnown RBP12.46□□□□□ -0.41
ACTB-208ENST00000464611 DHX57Q6P158 1386 aaKnown RBP12.45□□□□□ -0.42
ACTB-208ENST00000464611 DNAJC5Q9H3Z4 198 aa12.45□□□□□ -0.42
ACTB-208ENST00000464611 LRRC9Q6ZRR7 1453 aa12.45□□□□□ -0.42
ACTB-208ENST00000464611 FYCO1Q9BQS8 1478 aa12.45□□□□□ -0.42
ACTB-208ENST00000464611 FMN1Q68DA7 1419 aa12.45□□□□□ -0.42
ACTB-208ENST00000464611 ACIN1Q9UKV3 1341 aaKnown RBP12.44□□□□□ -0.42
ACTB-208ENST00000464611 TIMELESSQ9UNS1 1208 aa12.44□□□□□ -0.42
ACTB-208ENST00000464611 U3KPZ7 1027 aaPredicted RBP12.44□□□□□ -0.42
ACTB-208ENST00000464611 CASKIN1Q8WXD9 1431 aa12.43□□□□□ -0.42
ACTB-208ENST00000464611 FHOD3Q2V2M9 1422 aa12.42□□□□□ -0.42
ACTB-208ENST00000464611 CFAP43Q8NDM7 1665 aa12.42□□□□□ -0.42
ACTB-208ENST00000464611 PTPRGP23470 1445 aa12.4□□□□□ -0.42
ACTB-208ENST00000464611 SETD5Q9C0A6 1442 aa12.38□□□□□ -0.43
ACTB-208ENST00000464611 RAPGEF6Q8TEU7 1601 aa12.38□□□□□ -0.43
ACTB-208ENST00000464611 ABCC2Q92887 1545 aa12.37□□□□□ -0.43
ACTB-208ENST00000464611 HECW1Q76N89 1606 aa12.37□□□□□ -0.43
ACTB-208ENST00000464611 ABCA8O94911 1581 aa12.37□□□□□ -0.43
ACTB-208ENST00000464611 UHRF1BP1LA0JNW5 1464 aa12.36□□□□□ -0.43
ACTB-208ENST00000464611 PCF11O94913 1555 aaKnown RBP12.35□□□□□ -0.43
ACTB-208ENST00000464611 NCBP3Q53F19 620 aaKnown RBP12.35□□□□□ -0.43
ACTB-208ENST00000464611 UACAQ9BZF9 1416 aa12.35□□□□□ -0.43
ACTB-208ENST00000464611 ADCY10Q96PN6 1610 aa12.34□□□□□ -0.43
ACTB-208ENST00000464611 P3H3Q8IVL6 736 aa12.34□□□□□ -0.43
ACTB-208ENST00000464611 PLB1Q6P1J6 1458 aa12.34□□□□□ -0.43
ACTB-208ENST00000464611 RAB3GAP2Q9H2M9 1393 aa12.31□□□□□ -0.44
ACTB-208ENST00000464611 CCDC18Q5T9S5 1454 aa12.3□□□□□ -0.44
ACTB-208ENST00000464611 CYB5RLQ6IPT4 315 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 153.3 ms