RNA–Protein interactions for RNA: ENST00000464437.1

RPGR-204, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 3

Gene RPGR, Length 428 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-204ENST00000464437 PRDM2Q13029 1718 aa11.83□□□□□ -0.52
RPGR-204ENST00000464437 WDR62O43379 1518 aa11.81□□□□□ -0.52
RPGR-204ENST00000464437 URB2Q14146 1524 aaKnown RBP11.75□□□□□ -0.53
RPGR-204ENST00000464437 PRKAR2AP13861 404 aaKnown RBP11.73□□□□□ -0.53
RPGR-204ENST00000464437 SPDYE2BA6NHP3 402 aa11.71□□□□□ -0.53
RPGR-204ENST00000464437 SPDYE6P0CI01 402 aa11.71□□□□□ -0.53
RPGR-204ENST00000464437 SPDYE2Q495Y8 402 aa11.71□□□□□ -0.53
RPGR-204ENST00000464437 CLEC11AQ9Y240 323 aa11.7□□□□□ -0.54
RPGR-204ENST00000464437 ZBTB22O15209 634 aa11.69□□□□□ -0.54
RPGR-204ENST00000464437 TOPBP1Q92547 1522 aa11.67□□□□□ -0.54
RPGR-204ENST00000464437 ABCC8Q09428 1581 aa11.67□□□□□ -0.54
RPGR-204ENST00000464437 DNMBPQ6XZF7 1577 aa11.66□□□□□ -0.54
RPGR-204ENST00000464437 FBLN2P98095 1184 aa11.64□□□□□ -0.55
RPGR-204ENST00000464437 C19orf67A6NJJ6 358 aa11.63□□□□□ -0.55
RPGR-204ENST00000464437 SPDYE1Q8NFV5 336 aaPredicted RBP11.62□□□□□ -0.55
RPGR-204ENST00000464437 IFT140Q96RY7 1462 aa11.61□□□□□ -0.55
RPGR-204ENST00000464437 GABBR2O75899 941 aa11.59□□□□□ -0.55
RPGR-204ENST00000464437 ATXN8OSP0DMR3 200 aa11.58□□□□□ -0.56
RPGR-204ENST00000464437 LHX8Q68G74 356 aa11.57□□□□□ -0.56
RPGR-204ENST00000464437 DNAJC5Q9H3Z4 198 aa11.57□□□□□ -0.56
RPGR-204ENST00000464437 POLA1P09884 1462 aaPredicted RBP11.57□□□□□ -0.56
RPGR-204ENST00000464437 CUX1P39880 1505 aa11.56□□□□□ -0.56
RPGR-204ENST00000464437 ZNF608Q9ULD9 1512 aaPredicted RBP11.55□□□□□ -0.56
RPGR-204ENST00000464437 MKRN4PQ13434 485 aaPredicted RBP11.54□□□□□ -0.56
RPGR-204ENST00000464437 CHADLQ6NUI6 762 aa11.54□□□□□ -0.56
RPGR-204ENST00000464437 FGD5Q6ZNL6 1462 aa11.54□□□□□ -0.56
RPGR-204ENST00000464437 TARBP1Q13395 1621 aaKnown RBP11.53□□□□□ -0.56
RPGR-204ENST00000464437 ZNF692Q9BU19 519 aaPredicted RBP11.53□□□□□ -0.56
RPGR-204ENST00000464437 EIF4G3O43432 1585 aaKnown RBP11.53□□□□□ -0.56
RPGR-204ENST00000464437 SOGA1O94964 1423 aa11.52□□□□□ -0.57
RPGR-204ENST00000464437 RAD54L2Q9Y4B4 1467 aa11.51□□□□□ -0.57
RPGR-204ENST00000464437 SSUH2Q9Y2M2 353 aa11.5□□□□□ -0.57
RPGR-204ENST00000464437 WRNQ14191 1432 aaPredicted RBP eCLIP11.49□□□□□ -0.57
RPGR-204ENST00000464437 AQRO60306 1485 aaKnown RBP eCLIP11.48□□□□□ -0.57
RPGR-204ENST00000464437 TOP2BQ02880 1626 aa11.46□□□□□ -0.57
RPGR-204ENST00000464437 SYNJ1O43426 1573 aa11.46□□□□□ -0.57
RPGR-204ENST00000464437 TDRD9Q8NDG6 1382 aaKnown RBP11.46□□□□□ -0.57
RPGR-204ENST00000464437 WDR97A6NE52 1622 aa11.46□□□□□ -0.58
RPGR-204ENST00000464437 BIVM-ERCC5R4GMW8 1640 aa11.46□□□□□ -0.58
RPGR-204ENST00000464437 ABCA10Q8WWZ4 1543 aa11.42□□□□□ -0.58
RPGR-204ENST00000464437 PRR29P0C7W0 189 aa11.4□□□□□ -0.58
RPGR-204ENST00000464437 GRIN2BQ13224 1484 aa11.39□□□□□ -0.59
RPGR-204ENST00000464437 GAPVD1Q14C86 1478 aa11.39□□□□□ -0.59
RPGR-204ENST00000464437 SNAPC4Q5SXM2 1469 aa11.39□□□□□ -0.59
RPGR-204ENST00000464437 ABCA5Q8WWZ7 1642 aa11.38□□□□□ -0.59
RPGR-204ENST00000464437 PBRM1Q86U86 1689 aa11.38□□□□□ -0.59
RPGR-204ENST00000464437 CHD1O14646 1710 aa11.38□□□□□ -0.59
RPGR-204ENST00000464437 MAGI1Q96QZ7 1491 aaPredicted RBP11.37□□□□□ -0.59
RPGR-204ENST00000464437 POTEIP0CG38 1075 aa11.36□□□□□ -0.59
RPGR-204ENST00000464437 CD44P16070 742 aaKnown RBP11.33□□□□□ -0.6
RPGR-204ENST00000464437 SYNJ2O15056 1496 aa11.32□□□□□ -0.6
RPGR-204ENST00000464437 CHMP7Q8WUX9 453 aaPredicted RBP11.32□□□□□ -0.6
RPGR-204ENST00000464437 EHMT2Q96KQ7 1210 aa11.32□□□□□ -0.6
RPGR-204ENST00000464437 ERICH3Q5RHP9 1530 aa11.29□□□□□ -0.6
RPGR-204ENST00000464437 ADAMTS12P58397 1594 aa11.28□□□□□ -0.6
RPGR-204ENST00000464437 PLSCR2Q9NRY7 297 aa11.27□□□□□ -0.61
RPGR-204ENST00000464437 FARP1Q9Y4F1 1045 aaPredicted RBP11.26□□□□□ -0.61
RPGR-204ENST00000464437 FHAD1B1AJZ9 1412 aa11.26□□□□□ -0.61
RPGR-204ENST00000464437 ARHGEF11O15085 1522 aa11.25□□□□□ -0.61
RPGR-204ENST00000464437 RIMBP3CA6NJZ7 1639 aa11.25□□□□□ -0.61
RPGR-204ENST00000464437 RIMBP3BA6NNM3 1639 aa11.25□□□□□ -0.61
RPGR-204ENST00000464437 RIMBP3Q9UFD9 1639 aa11.25□□□□□ -0.61
RPGR-204ENST00000464437 KIF27Q86VH2 1401 aa11.25□□□□□ -0.61
RPGR-204ENST00000464437 GRIN2AQ12879 1464 aa11.25□□□□□ -0.61
RPGR-204ENST00000464437 CLASP1Q7Z460 1538 aa11.25□□□□□ -0.61
RPGR-204ENST00000464437 TRIM41Q8WV44 630 aa11.23□□□□□ -0.61
RPGR-204ENST00000464437 CEP170Q5SW79 1584 aa11.2□□□□□ -0.62
RPGR-204ENST00000464437 DCBLD2Q96PD2 775 aa11.19□□□□□ -0.62
RPGR-204ENST00000464437 CUL7Q14999 1698 aa11.19□□□□□ -0.62
RPGR-204ENST00000464437 NUP160Q12769 1436 aa11.18□□□□□ -0.62
RPGR-204ENST00000464437 IGF1RP08069 1367 aa11.18□□□□□ -0.62
RPGR-204ENST00000464437 ARAP1Q96P48 1450 aa11.15□□□□□ -0.62
RPGR-204ENST00000464437 CLCN6P51797 869 aa11.14□□□□□ -0.63
RPGR-204ENST00000464437 CYB5RLQ6IPT4 315 aa11.14□□□□□ -0.63
RPGR-204ENST00000464437 RUSC2Q8N2Y8 1516 aa11.13□□□□□ -0.63
RPGR-204ENST00000464437 CARMIL1Q5VZK9 1371 aa11.13□□□□□ -0.63
RPGR-204ENST00000464437 SHROOM2Q13796 1616 aa11.11□□□□□ -0.63
RPGR-204ENST00000464437 ZRANB1Q9UGI0 708 aa11.11□□□□□ -0.63
RPGR-204ENST00000464437 ZNF579Q8NAF0 562 aaKnown RBP11.1□□□□□ -0.63
RPGR-204ENST00000464437 ERCC6L2Q5T890 1561 aa11.09□□□□□ -0.63
RPGR-204ENST00000464437 KIAA0586Q9BVV6 1533 aa11.08□□□□□ -0.64
RPGR-204ENST00000464437 RAPGEF2Q9Y4G8 1499 aa11.07□□□□□ -0.64
RPGR-204ENST00000464437 PRG4Q92954 1404 aaPredicted RBP11.07□□□□□ -0.64
RPGR-204ENST00000464437 JPH4Q96JJ6 628 aa11.06□□□□□ -0.64
RPGR-204ENST00000464437 GALR2O43603 387 aaPredicted RBP11.05□□□□□ -0.64
RPGR-204ENST00000464437 CSRNP3Q8WYN3 585 aa11.03□□□□□ -0.64
RPGR-204ENST00000464437 OTUD5Q96G74 571 aa11.03□□□□□ -0.64
RPGR-204ENST00000464437 IQGAP2Q13576 1575 aa11.03□□□□□ -0.64
RPGR-204ENST00000464437 CREBZFQ9NS37 354 aa11.02□□□□□ -0.65
RPGR-204ENST00000464437 PRXQ9BXM0 1461 aa11.01□□□□□ -0.65
RPGR-204ENST00000464437 EEA1Q15075 1411 aa11.01□□□□□ -0.65
RPGR-204ENST00000464437 POTEB2H3BUK9 544 aa11□□□□□ -0.65
RPGR-204ENST00000464437 CARMIL2Q6F5E8 1435 aa10.98□□□□□ -0.65
RPGR-204ENST00000464437 CTTNBP2Q8WZ74 1663 aa10.98□□□□□ -0.65
RPGR-204ENST00000464437 FAM9AQ8IZU1 332 aaPredicted RBP10.96□□□□□ -0.65
RPGR-204ENST00000464437 UGGT2Q9NYU1 1516 aa10.94□□□□□ -0.66
RPGR-204ENST00000464437 POTEMA6NI47 508 aa10.94□□□□□ -0.66
RPGR-204ENST00000464437 PHF12Q96QT6 1004 aa10.94□□□□□ -0.66
RPGR-204ENST00000464437 TTBK1Q5TCY1 1321 aaPredicted RBP10.93□□□□□ -0.66
RPGR-204ENST00000464437 DISP1Q96F81 1524 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms