RNA–Protein interactions for RNA: ENST00000461762.5

C9orf78-204, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 2

Gene C9orf78, Length 2,390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-204ENST00000461762 DNMBPQ6XZF7 1577 aa21.88■■□□□ 1.09
C9orf78-204ENST00000461762 PHLDB1Q86UU1 1377 aa21.88■■□□□ 1.09
C9orf78-204ENST00000461762 FHAD1B1AJZ9 1412 aa21.87■■□□□ 1.09
C9orf78-204ENST00000461762 SETD5Q9C0A6 1442 aa21.87■■□□□ 1.09
C9orf78-204ENST00000461762 ABCA10Q8WWZ4 1543 aa21.81■■□□□ 1.08
C9orf78-204ENST00000461762 TOPBP1Q92547 1522 aa21.78■■□□□ 1.08
C9orf78-204ENST00000461762 CFAP43Q8NDM7 1665 aa21.77■■□□□ 1.08
C9orf78-204ENST00000461762 LAMC3Q9Y6N6 1575 aa21.77■■□□□ 1.08
C9orf78-204ENST00000461762 PCF11O94913 1555 aaKnown RBP21.76■■□□□ 1.07
C9orf78-204ENST00000461762 P3H3Q8IVL6 736 aa21.75■■□□□ 1.07
C9orf78-204ENST00000461762 POLA1P09884 1462 aaPredicted RBP21.75■■□□□ 1.07
C9orf78-204ENST00000461762 FAM50AQ14320 339 aaKnown RBP21.74■■□□□ 1.07
C9orf78-204ENST00000461762 RAD54L2Q9Y4B4 1467 aa21.74■■□□□ 1.07
C9orf78-204ENST00000461762 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.72■■□□□ 1.07
C9orf78-204ENST00000461762 AQRO60306 1485 aaKnown RBP eCLIP21.72■■□□□ 1.077e-8■■■□□ 18.7
C9orf78-204ENST00000461762 FYCO1Q9BQS8 1478 aa21.72■■□□□ 1.07
C9orf78-204ENST00000461762 FHOD3Q2V2M9 1422 aa21.72■■□□□ 1.07
C9orf78-204ENST00000461762 CUL7Q14999 1698 aa21.72■■□□□ 1.07
C9orf78-204ENST00000461762 CASKIN1Q8WXD9 1431 aa21.71■■□□□ 1.07
C9orf78-204ENST00000461762 TIMELESSQ9UNS1 1208 aa21.71■■□□□ 1.07
C9orf78-204ENST00000461762 EFCAB5A4FU69 1503 aa21.71■■□□□ 1.07
C9orf78-204ENST00000461762 SIN3AQ96ST3 1273 aa21.69■■□□□ 1.06
C9orf78-204ENST00000461762 SUPT16HQ9Y5B9 1047 aaKnown RBP21.68■■□□□ 1.06
C9orf78-204ENST00000461762 NESP48681 1621 aa21.67■■□□□ 1.06
C9orf78-204ENST00000461762 ATP1B4Q9UN42 357 aaPredicted RBP21.66■■□□□ 1.06
C9orf78-204ENST00000461762 WDR97A6NE52 1622 aa21.65■■□□□ 1.06
C9orf78-204ENST00000461762 MYT1Q01538 1121 aa21.64■■□□□ 1.05
C9orf78-204ENST00000461762 KCNH8Q96L42 1107 aa21.6■■□□□ 1.05
C9orf78-204ENST00000461762 FMN1Q68DA7 1419 aa21.6■■□□□ 1.05
C9orf78-204ENST00000461762 URB2Q14146 1524 aaKnown RBP21.59■■□□□ 1.05
C9orf78-204ENST00000461762 PPP1R15AO75807 674 aaPredicted RBP21.59■■□□□ 1.05
C9orf78-204ENST00000461762 PDS5BQ9NTI5 1447 aa21.59■■□□□ 1.05
C9orf78-204ENST00000461762 CTTNBP2Q8WZ74 1663 aa21.58■■□□□ 1.04
C9orf78-204ENST00000461762 FGD6Q6ZV73 1430 aa21.57■■□□□ 1.04
C9orf78-204ENST00000461762 SNAPC4Q5SXM2 1469 aa21.56■■□□□ 1.04
C9orf78-204ENST00000461762 DDX10Q13206 875 aaKnown RBP21.55■■□□□ 1.04
C9orf78-204ENST00000461762 ABCA5Q8WWZ7 1642 aa21.55■■□□□ 1.04
C9orf78-204ENST00000461762 PTPRKQ15262 1439 aa21.49■■□□□ 1.03
C9orf78-204ENST00000461762 HFM1A2PYH4 1435 aa21.48■■□□□ 1.03
C9orf78-204ENST00000461762 MTUS2Q5JR59 1369 aa21.48■■□□□ 1.03
C9orf78-204ENST00000461762 SAMD9Q5K651 1589 aa21.47■■□□□ 1.03
C9orf78-204ENST00000461762 GAPVD1Q14C86 1478 aa21.46■■□□□ 1.03
C9orf78-204ENST00000461762 TDRD9Q8NDG6 1382 aaKnown RBP21.45■■□□□ 1.02
C9orf78-204ENST00000461762 UACAQ9BZF9 1416 aa21.45■■□□□ 1.02
C9orf78-204ENST00000461762 GRIN2BQ13224 1484 aa21.44■■□□□ 1.02
C9orf78-204ENST00000461762 CCDC18Q5T9S5 1454 aa21.44■■□□□ 1.02
C9orf78-204ENST00000461762 CCER2I3L3R5 266 aa21.43■■□□□ 1.02
C9orf78-204ENST00000461762 NCOA2Q15596 1464 aa21.42■■□□□ 1.02
C9orf78-204ENST00000461762 MYOM3Q5VTT5 1437 aa21.41■■□□□ 1.02
C9orf78-204ENST00000461762 NAIPQ13075 1403 aa21.4■■□□□ 1.02
C9orf78-204ENST00000461762 PTPN23Q9H3S7 1636 aa21.4■■□□□ 1.02
C9orf78-204ENST00000461762 HIRIP3Q9BW71 556 aaPredicted RBP21.4■■□□□ 1.02
C9orf78-204ENST00000461762 KIF21AQ7Z4S6 1674 aa21.4■■□□□ 1.02
C9orf78-204ENST00000461762 TONSLQ96HA7 1378 aa21.39■■□□□ 1.01
C9orf78-204ENST00000461762 THOC2Q8NI27 1593 aaKnown RBP21.39■■□□□ 1.01
C9orf78-204ENST00000461762 TARBP1Q13395 1621 aaKnown RBP21.37■■□□□ 1.01
C9orf78-204ENST00000461762 LRRIQ1Q96JM4 1722 aa21.37■■□□□ 1.01
C9orf78-204ENST00000461762 TSHZ2Q9NRE2 1034 aa21.36■■□□□ 1.01
C9orf78-204ENST00000461762 ANP32CO43423 234 aa21.34■■□□□ 1.01
C9orf78-204ENST00000461762 ARHGEF11O15085 1522 aa21.34■■□□□ 1.01
C9orf78-204ENST00000461762 EHBP1L1Q8N3D4 1523 aa21.34■■□□□ 1.01
C9orf78-204ENST00000461762 SUPT6HQ7KZ85 1726 aaKnown RBP21.32■■□□□ 1
C9orf78-204ENST00000461762 UGGT2Q9NYU1 1516 aa21.32■■□□□ 1
C9orf78-204ENST00000461762 KDM5BQ9UGL1 1544 aa21.29■■□□□ 1
C9orf78-204ENST00000461762 MAGI3Q5TCQ9 1506 aa21.28■■□□□ 1
C9orf78-204ENST00000461762 TCOF1Q13428 1488 aaKnown RBP21.27■■□□□ 1
C9orf78-204ENST00000461762 FKBP8Q14318 412 aa21.26■□□□□ 0.99
C9orf78-204ENST00000461762 MRC2Q9UBG0 1479 aa21.25■□□□□ 0.99
C9orf78-204ENST00000461762 PBRM1Q86U86 1689 aa21.25■□□□□ 0.99
C9orf78-204ENST00000461762 DNAJC5BQ9UF47 199 aa21.23■□□□□ 0.99
C9orf78-204ENST00000461762 ADAMTS12P58397 1594 aa21.21■□□□□ 0.99
C9orf78-204ENST00000461762 AKNAQ7Z591 1439 aa21.21■□□□□ 0.99
C9orf78-204ENST00000461762 TRIM52Q96A61 297 aa21.21■□□□□ 0.99
C9orf78-204ENST00000461762 DENND4BO75064 1496 aaPredicted RBP21.2■□□□□ 0.98
C9orf78-204ENST00000461762 RRP7BPQ9NSQ0 103 aa21.2■□□□□ 0.98
C9orf78-204ENST00000461762 BCANQ96GW7 911 aa21.18■□□□□ 0.98
C9orf78-204ENST00000461762 IQGAP2Q13576 1575 aa21.17■□□□□ 0.98
C9orf78-204ENST00000461762 EPRSP07814 1512 aaKnown RBP21.17■□□□□ 0.98
C9orf78-204ENST00000461762 HECW1Q76N89 1606 aa21.17■□□□□ 0.98
C9orf78-204ENST00000461762 MIA2Q96PC5 1412 aa21.16■□□□□ 0.98
C9orf78-204ENST00000461762 CHIC2Q9UKJ5 165 aa21.16■□□□□ 0.98
C9orf78-204ENST00000461762 GCC2Q8IWJ2 1684 aa21.14■□□□□ 0.98
C9orf78-204ENST00000461762 IFT140Q96RY7 1462 aa21.14■□□□□ 0.97
C9orf78-204ENST00000461762 NEFLP07196 543 aa21.13■□□□□ 0.97
C9orf78-204ENST00000461762 HSPA5P11021 654 aaKnown RBP21.12■□□□□ 0.97
C9orf78-204ENST00000461762 WASHC2AQ641Q2 1341 aa21.11■□□□□ 0.97
C9orf78-204ENST00000461762 WDR62O43379 1518 aa21.1■□□□□ 0.97
C9orf78-204ENST00000461762 MPHOSPH9Q99550 1183 aa21.1■□□□□ 0.97
C9orf78-204ENST00000461762 KDM6BO15054 1643 aa21.1■□□□□ 0.97
C9orf78-204ENST00000461762 CDK13Q14004 1512 aaKnown RBP21.08■□□□□ 0.96
C9orf78-204ENST00000461762 EIF4G2P78344 907 aaKnown RBP eCLIP21.05■□□□□ 0.96
C9orf78-204ENST00000461762 L3MBTL2Q969R5 705 aa21.04■□□□□ 0.96
C9orf78-204ENST00000461762 ROCK1Q13464 1354 aa21.03■□□□□ 0.96
C9orf78-204ENST00000461762 ANKRD30BQ9BXX2 1392 aa21■□□□□ 0.95
C9orf78-204ENST00000461762 KIAA0586Q9BVV6 1533 aa21■□□□□ 0.95
C9orf78-204ENST00000461762 DAPK1P53355 1430 aa20.99■□□□□ 0.95
C9orf78-204ENST00000461762 HNRNPUQ00839 825 aaKnown RBP eCLIP20.99■□□□□ 0.95
C9orf78-204ENST00000461762 ABCC5O15440 1437 aa20.98■□□□□ 0.95
C9orf78-204ENST00000461762 FOXD1Q16676 465 aa20.97■□□□□ 0.95
C9orf78-204ENST00000461762 CNTLNQ9NXG0 1405 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms