RNA–Protein interactions for RNA: ENST00000461762.5

C9orf78-204, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 2

Gene C9orf78, Length 2,390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-204ENST00000461762 NISCHQ9Y2I1 1504 aa31.02■■■□□ 2.56
C9orf78-204ENST00000461762 CCDC180Q9P1Z9 1646 aa26.58■■□□□ 1.85
C9orf78-204ENST00000461762 SHROOM4Q9ULL8 1493 aa26.41■■□□□ 1.82
C9orf78-204ENST00000461762 ZCCHC6Q5VYS8 1495 aaKnown RBP26.27■■□□□ 1.8
C9orf78-204ENST00000461762 SUPT5HO00267 1087 aaKnown RBP26.01■■□□□ 1.75
C9orf78-204ENST00000461762 DCAF1Q9Y4B6 1507 aa25.62■■□□□ 1.69
C9orf78-204ENST00000461762 DCAF8L2P0C7V8 631 aa25.52■■□□□ 1.68
C9orf78-204ENST00000461762 CHIC1Q5VXU3 224 aa25.48■■□□□ 1.67
C9orf78-204ENST00000461762 MYO15BQ96JP2 1530 aa25.35■■□□□ 1.65
C9orf78-204ENST00000461762 HRCP23327 699 aa24.95■■□□□ 1.58
C9orf78-204ENST00000461762 ABCC9O60706 1549 aa24.78■■□□□ 1.56
C9orf78-204ENST00000461762 PCGF6Q9BYE7 350 aa24.75■■□□□ 1.55
C9orf78-204ENST00000461762 LOC105371045A0A1W2PR82 267 aa24.67■■□□□ 1.54
C9orf78-204ENST00000461762 RSF1Q96T23 1441 aaPredicted RBP24.62■■□□□ 1.53
C9orf78-204ENST00000461762 SCRIBQ14160 1630 aa24.57■■□□□ 1.52
C9orf78-204ENST00000461762 NACADO15069 1562 aa24.57■■□□□ 1.52
C9orf78-204ENST00000461762 RB1CC1Q8TDY2 1594 aa24.35■■□□□ 1.49
C9orf78-204ENST00000461762 TRIM26Q12899 539 aaPredicted RBP24.33■■□□□ 1.49
C9orf78-204ENST00000461762 PPARGC1BQ86YN6 1023 aaKnown RBP24.31■■□□□ 1.48
C9orf78-204ENST00000461762 TRIM41Q8WV44 630 aa24.27■■□□□ 1.48
C9orf78-204ENST00000461762 CECR2Q9BXF3 1484 aa24.16■■□□□ 1.46
C9orf78-204ENST00000461762 MROH2BQ7Z745 1585 aa24.09■■□□□ 1.45
C9orf78-204ENST00000461762 FAM9AQ8IZU1 332 aaPredicted RBP24■■□□□ 1.43
C9orf78-204ENST00000461762 WIZO95785 1651 aa23.92■■□□□ 1.42
C9orf78-204ENST00000461762 ZEB1P37275 1124 aaPredicted RBP23.89■■□□□ 1.42
C9orf78-204ENST00000461762 BAZ1AQ9NRL2 1556 aaPredicted RBP23.85■■□□□ 1.41
C9orf78-204ENST00000461762 EIF4G1Q04637 1599 aaKnown RBP23.74■■□□□ 1.39
C9orf78-204ENST00000461762 EHMT2Q96KQ7 1210 aa23.71■■□□□ 1.39
C9orf78-204ENST00000461762 UNC13AQ9UPW8 1703 aa23.66■■□□□ 1.38
C9orf78-204ENST00000461762 SMARCA4P51532 1647 aa23.62■■□□□ 1.37
C9orf78-204ENST00000461762 TOP2AP11388 1531 aaKnown RBP23.61■■□□□ 1.37
C9orf78-204ENST00000461762 CCDC88BA6NC98 1476 aa23.53■■□□□ 1.36
C9orf78-204ENST00000461762 SMARCA2P51531 1590 aa23.47■■□□□ 1.35
C9orf78-204ENST00000461762 ABCC8Q09428 1581 aa23.43■■□□□ 1.34
C9orf78-204ENST00000461762 BICRAQ9NZM4 1560 aa23.4■■□□□ 1.34
C9orf78-204ENST00000461762 WRNQ14191 1432 aaPredicted RBP eCLIP23.37■■□□□ 1.33
C9orf78-204ENST00000461762 PEG3Q9GZU2 1588 aa23.3■■□□□ 1.32
C9orf78-204ENST00000461762 SOGA1O94964 1423 aa23.3■■□□□ 1.32
C9orf78-204ENST00000461762 TNIKQ9UKE5 1360 aa23.29■■□□□ 1.32
C9orf78-204ENST00000461762 EEA1Q15075 1411 aa23.28■■□□□ 1.32
C9orf78-204ENST00000461762 CEP162Q5TB80 1403 aa23.27■■□□□ 1.32
C9orf78-204ENST00000461762 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.25■■□□□ 1.31
C9orf78-204ENST00000461762 CSRNP3Q8WYN3 585 aa23.23■■□□□ 1.31
C9orf78-204ENST00000461762 CCER1Q8TC90 406 aaPredicted RBP23.2■■□□□ 1.3
C9orf78-204ENST00000461762 RUSC2Q8N2Y8 1516 aa23.17■■□□□ 1.3
C9orf78-204ENST00000461762 PABPN1Q86U42 306 aaKnown RBP eCLIP23.16■■□□□ 1.3
C9orf78-204ENST00000461762 UBTFP17480 764 aaKnown RBP23.07■■□□□ 1.28
C9orf78-204ENST00000461762 GOLGA3Q08378 1498 aa23.07■■□□□ 1.28
C9orf78-204ENST00000461762 SCAF1Q9H7N4 1312 aaKnown RBP23.04■■□□□ 1.28
C9orf78-204ENST00000461762 ATAD2BQ9ULI0 1458 aa23.03■■□□□ 1.28
C9orf78-204ENST00000461762 TTBK1Q5TCY1 1321 aaPredicted RBP22.99■■□□□ 1.27
C9orf78-204ENST00000461762 BAZ1BQ9UIG0 1483 aaKnown RBP22.95■■□□□ 1.26
C9orf78-204ENST00000461762 SYNJ1O43426 1573 aa22.94■■□□□ 1.26
C9orf78-204ENST00000461762 CEP164Q9UPV0 1460 aa22.93■■□□□ 1.26
C9orf78-204ENST00000461762 KIF21BO75037 1637 aa22.9■■□□□ 1.26
C9orf78-204ENST00000461762 DIEXFQ68CQ4 756 aaKnown RBP22.86■■□□□ 1.25
C9orf78-204ENST00000461762 ACIN1Q9UKV3 1341 aaKnown RBP22.81■■□□□ 1.24
C9orf78-204ENST00000461762 CLIP1P30622 1438 aa22.81■■□□□ 1.24
C9orf78-204ENST00000461762 PELP1Q8IZL8 1130 aaKnown RBP22.78■■□□□ 1.24
C9orf78-204ENST00000461762 VPS8Q8N3P4 1428 aa22.75■■□□□ 1.23
C9orf78-204ENST00000461762 NEUROD1Q13562 356 aa22.74■■□□□ 1.23
C9orf78-204ENST00000461762 HMGXB3Q12766 1538 aa22.73■■□□□ 1.23
C9orf78-204ENST00000461762 RAPGEF2Q9Y4G8 1499 aa22.72■■□□□ 1.23
C9orf78-204ENST00000461762 ZNF316A6NFI3 1004 aaPredicted RBP22.7■■□□□ 1.22
C9orf78-204ENST00000461762 NCAPD3P42695 1498 aa22.68■■□□□ 1.22
C9orf78-204ENST00000461762 TOP2BQ02880 1626 aa22.67■■□□□ 1.22
C9orf78-204ENST00000461762 HNRNPUL2Q1KMD3 747 aaKnown RBP22.63■■□□□ 1.21
C9orf78-204ENST00000461762 CENPBP07199 599 aaPredicted RBP22.62■■□□□ 1.21
C9orf78-204ENST00000461762 APLP2Q06481 763 aa22.58■■□□□ 1.21
C9orf78-204ENST00000461762 BIVM-ERCC5R4GMW8 1640 aa22.58■■□□□ 1.2
C9orf78-204ENST00000461762 PRXQ9BXM0 1461 aa22.55■■□□□ 1.2
C9orf78-204ENST00000461762 ERICH3Q5RHP9 1530 aa22.53■■□□□ 1.2
C9orf78-204ENST00000461762 GTF3C3Q9Y5Q9 886 aa22.49■■□□□ 1.19
C9orf78-204ENST00000461762 RANGAP1P46060 587 aaPredicted RBP22.47■■□□□ 1.19
C9orf78-204ENST00000461762 ARAP1Q96P48 1450 aa22.44■■□□□ 1.18
C9orf78-204ENST00000461762 CFTRP13569 1480 aa22.42■■□□□ 1.18
C9orf78-204ENST00000461762 CUX1P39880 1505 aa22.42■■□□□ 1.18
C9orf78-204ENST00000461762 CLSPNQ9HAW4 1339 aa22.37■■□□□ 1.17
C9orf78-204ENST00000461762 MIER1Q8N108 512 aa22.36■■□□□ 1.17
C9orf78-204ENST00000461762 KIF27Q86VH2 1401 aa22.36■■□□□ 1.17
C9orf78-204ENST00000461762 KANK4Q5T7N3 995 aaPredicted RBP22.34■■□□□ 1.17
C9orf78-204ENST00000461762 PRDM2Q13029 1718 aa22.32■■□□□ 1.16
C9orf78-204ENST00000461762 DHX57Q6P158 1386 aaKnown RBP22.31■■□□□ 1.16
C9orf78-204ENST00000461762 RRBP1Q9P2E9 1410 aaKnown RBP22.27■■□□□ 1.16
C9orf78-204ENST00000461762 YTHDC1Q96MU7 727 aaKnown RBP22.23■■□□□ 1.15
C9orf78-204ENST00000461762 ARHGAP35Q9NRY4 1499 aa22.22■■□□□ 1.15
C9orf78-204ENST00000461762 CUX2O14529 1486 aa22.2■■□□□ 1.14
C9orf78-204ENST00000461762 CADPSQ9ULU8 1353 aa22.17■■□□□ 1.14
C9orf78-204ENST00000461762 IGF1RP08069 1367 aa22.16■■□□□ 1.14
C9orf78-204ENST00000461762 CCNB3Q8WWL7 1395 aa22.14■■□□□ 1.13
C9orf78-204ENST00000461762 CC2D2AQ9P2K1 1620 aa22.08■■□□□ 1.12
C9orf78-204ENST00000461762 MAP3K1Q13233 1512 aa22.06■■□□□ 1.12
C9orf78-204ENST00000461762 CARMIL1Q5VZK9 1371 aa22.03■■□□□ 1.12
C9orf78-204ENST00000461762 TIAM1Q13009 1591 aa21.98■■□□□ 1.11
C9orf78-204ENST00000461762 FGD5Q6ZNL6 1462 aa21.98■■□□□ 1.11
C9orf78-204ENST00000461762 RAB3GAP2Q9H2M9 1393 aa21.94■■□□□ 1.1
C9orf78-204ENST00000461762 ITGAEP38570 1179 aa21.93■■□□□ 1.1
C9orf78-204ENST00000461762 LRRC9Q6ZRR7 1453 aa21.93■■□□□ 1.1
C9orf78-204ENST00000461762 FANCD2Q9BXW9 1451 aa21.93■■□□□ 1.1
C9orf78-204ENST00000461762 MAPKBP1O60336 1514 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 362.8 ms