RNA–Protein interactions for RNA: ENST00000461710.5

CDK5RAP1-207, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 2

Gene CDK5RAP1, Length 2,650 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-207ENST00000461710 DDX10Q13206 875 aaKnown RBP16.4■□□□□ 0.22
CDK5RAP1-207ENST00000461710 PHLDB1Q86UU1 1377 aa16.39■□□□□ 0.21
CDK5RAP1-207ENST00000461710 IGF1RP08069 1367 aa16.38■□□□□ 0.21
CDK5RAP1-207ENST00000461710 PPP1R15AO75807 674 aaPredicted RBP16.38■□□□□ 0.21
CDK5RAP1-207ENST00000461710 FKBP8Q14318 412 aa16.38■□□□□ 0.21
CDK5RAP1-207ENST00000461710 BCANQ96GW7 911 aa16.38■□□□□ 0.21
CDK5RAP1-207ENST00000461710 SIN3AQ96ST3 1273 aa16.37■□□□□ 0.21
CDK5RAP1-207ENST00000461710 CFAP43Q8NDM7 1665 aa16.36■□□□□ 0.21
CDK5RAP1-207ENST00000461710 PRDM2Q13029 1718 aa16.35■□□□□ 0.21
CDK5RAP1-207ENST00000461710 TIMELESSQ9UNS1 1208 aa16.34■□□□□ 0.21
CDK5RAP1-207ENST00000461710 CCER2I3L3R5 266 aa16.31■□□□□ 0.2
CDK5RAP1-207ENST00000461710 FAM50AQ14320 339 aaKnown RBP16.31■□□□□ 0.2
CDK5RAP1-207ENST00000461710 CARMIL1Q5VZK9 1371 aa16.3■□□□□ 0.2
CDK5RAP1-207ENST00000461710 FHAD1B1AJZ9 1412 aa16.3■□□□□ 0.2
CDK5RAP1-207ENST00000461710 PCF11O94913 1555 aaKnown RBP16.3■□□□□ 0.2
CDK5RAP1-207ENST00000461710 NEFLP07196 543 aa16.27■□□□□ 0.19
CDK5RAP1-207ENST00000461710 ANP32CO43423 234 aa16.24■□□□□ 0.19
CDK5RAP1-207ENST00000461710 HIRIP3Q9BW71 556 aaPredicted RBP16.24■□□□□ 0.19
CDK5RAP1-207ENST00000461710 TRIM52Q96A61 297 aa16.24■□□□□ 0.19
CDK5RAP1-207ENST00000461710 RBM19Q9Y4C8 960 aaKnown RBP16.24■□□□□ 0.19
CDK5RAP1-207ENST00000461710 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.23■□□□□ 0.19
CDK5RAP1-207ENST00000461710 FGD5Q6ZNL6 1462 aa16.23■□□□□ 0.19
CDK5RAP1-207ENST00000461710 FYCO1Q9BQS8 1478 aa16.2■□□□□ 0.18
CDK5RAP1-207ENST00000461710 FHOD3Q2V2M9 1422 aa16.17■□□□□ 0.18
CDK5RAP1-207ENST00000461710 P3H3Q8IVL6 736 aa16.17■□□□□ 0.18
CDK5RAP1-207ENST00000461710 AQRO60306 1485 aaKnown RBP eCLIP16.16■□□□□ 0.185e-7■■■□□ 15.5
CDK5RAP1-207ENST00000461710 CASKIN1Q8WXD9 1431 aa16.16■□□□□ 0.18
CDK5RAP1-207ENST00000461710 EFCAB5A4FU69 1503 aa16.16■□□□□ 0.18
CDK5RAP1-207ENST00000461710 TONSLQ96HA7 1378 aa16.15■□□□□ 0.18
CDK5RAP1-207ENST00000461710 CADPSQ9ULU8 1353 aa16.15■□□□□ 0.18
CDK5RAP1-207ENST00000461710 ATP1B4Q9UN42 357 aaPredicted RBP16.14■□□□□ 0.17
CDK5RAP1-207ENST00000461710 CCDC18Q5T9S5 1454 aa16.14■□□□□ 0.17
CDK5RAP1-207ENST00000461710 FGD6Q6ZV73 1430 aa16.14■□□□□ 0.17
CDK5RAP1-207ENST00000461710 BCL11AQ9H165 835 aa16.13■□□□□ 0.17
CDK5RAP1-207ENST00000461710 UACAQ9BZF9 1416 aa16.12■□□□□ 0.17
CDK5RAP1-207ENST00000461710 HFM1A2PYH4 1435 aa16.12■□□□□ 0.17
CDK5RAP1-207ENST00000461710 PTPN23Q9H3S7 1636 aa16.11■□□□□ 0.17
CDK5RAP1-207ENST00000461710 PTPRKQ15262 1439 aa16.09■□□□□ 0.17
CDK5RAP1-207ENST00000461710 KDM5BQ9UGL1 1544 aa16.09■□□□□ 0.17
CDK5RAP1-207ENST00000461710 CTTNBP2Q8WZ74 1663 aa16.08■□□□□ 0.16
CDK5RAP1-207ENST00000461710 SNAPC4Q5SXM2 1469 aa16.06■□□□□ 0.16
CDK5RAP1-207ENST00000461710 MSH5O43196 834 aa16.06■□□□□ 0.16
CDK5RAP1-207ENST00000461710 FMN1Q68DA7 1419 aa16.05■□□□□ 0.16
CDK5RAP1-207ENST00000461710 CC2D2AQ9P2K1 1620 aa16.05■□□□□ 0.16
CDK5RAP1-207ENST00000461710 ABCA10Q8WWZ4 1543 aa16.05■□□□□ 0.16
CDK5RAP1-207ENST00000461710 NAIPQ13075 1403 aa16.04■□□□□ 0.16
CDK5RAP1-207ENST00000461710 CUL7Q14999 1698 aa16.04■□□□□ 0.16
CDK5RAP1-207ENST00000461710 HNRNPUQ00839 825 aaKnown RBP eCLIP16.03■□□□□ 0.16
CDK5RAP1-207ENST00000461710 RAD54L2Q9Y4B4 1467 aa16.02■□□□□ 0.16
CDK5RAP1-207ENST00000461710 LRRIQ1Q96JM4 1722 aa16.02■□□□□ 0.15
CDK5RAP1-207ENST00000461710 MTUS2Q5JR59 1369 aa16.02■□□□□ 0.15
CDK5RAP1-207ENST00000461710 FANCIQ9NVI1 1328 aa16.02■□□□□ 0.15
CDK5RAP1-207ENST00000461710 DNMBPQ6XZF7 1577 aa16.01■□□□□ 0.15
CDK5RAP1-207ENST00000461710 FANCD2Q9BXW9 1451 aa16.01■□□□□ 0.15
CDK5RAP1-207ENST00000461710 MYOM3Q5VTT5 1437 aa15.99■□□□□ 0.15
CDK5RAP1-207ENST00000461710 POLA1P09884 1462 aaPredicted RBP15.99■□□□□ 0.15
CDK5RAP1-207ENST00000461710 NCOA2Q15596 1464 aa15.99■□□□□ 0.15
CDK5RAP1-207ENST00000461710 WASHC2AQ641Q2 1341 aa15.98■□□□□ 0.15
CDK5RAP1-207ENST00000461710 IRX6P78412 446 aaPredicted RBP15.97■□□□□ 0.15
CDK5RAP1-207ENST00000461710 CDK11AQ9UQ88 783 aaPredicted RBP15.97■□□□□ 0.15
CDK5RAP1-207ENST00000461710 SAMD9Q5K651 1589 aa15.97■□□□□ 0.15
CDK5RAP1-207ENST00000461710 TOPBP1Q92547 1522 aa15.96■□□□□ 0.15
CDK5RAP1-207ENST00000461710 SUPT6HQ7KZ85 1726 aaKnown RBP15.96■□□□□ 0.15
CDK5RAP1-207ENST00000461710 GRIN2BQ13224 1484 aa15.95■□□□□ 0.14
CDK5RAP1-207ENST00000461710 ERICH6BQ5W0A0 696 aa15.95■□□□□ 0.14
CDK5RAP1-207ENST00000461710 HSPA5P11021 654 aaKnown RBP15.94■□□□□ 0.14
CDK5RAP1-207ENST00000461710 THOC2Q8NI27 1593 aaKnown RBP15.94■□□□□ 0.14
CDK5RAP1-207ENST00000461710 HECW1Q76N89 1606 aa15.94■□□□□ 0.14
CDK5RAP1-207ENST00000461710 DENND4BO75064 1496 aaPredicted RBP15.93■□□□□ 0.14
CDK5RAP1-207ENST00000461710 EHBP1L1Q8N3D4 1523 aa15.93■□□□□ 0.14
CDK5RAP1-207ENST00000461710 GCC2Q8IWJ2 1684 aa15.92■□□□□ 0.14
CDK5RAP1-207ENST00000461710 CNTLNQ9NXG0 1405 aa15.92■□□□□ 0.14
CDK5RAP1-207ENST00000461710 ARHGEF11O15085 1522 aa15.91■□□□□ 0.14
CDK5RAP1-207ENST00000461710 UGGT2Q9NYU1 1516 aa15.91■□□□□ 0.14
CDK5RAP1-207ENST00000461710 PPP4R2Q9NY27 417 aa15.89■□□□□ 0.13
CDK5RAP1-207ENST00000461710 EIF4G2P78344 907 aaKnown RBP eCLIP15.88■□□□□ 0.13
CDK5RAP1-207ENST00000461710 CCDC184Q52MB2 194 aa15.88■□□□□ 0.13
CDK5RAP1-207ENST00000461710 TCOF1Q13428 1488 aaKnown RBP15.87■□□□□ 0.13
CDK5RAP1-207ENST00000461710 MAGI3Q5TCQ9 1506 aa15.87■□□□□ 0.13
CDK5RAP1-207ENST00000461710 KDM6BO15054 1643 aa15.86■□□□□ 0.13
CDK5RAP1-207ENST00000461710 AKNAQ7Z591 1439 aa15.86■□□□□ 0.13
CDK5RAP1-207ENST00000461710 RRP7BPQ9NSQ0 103 aa15.86■□□□□ 0.13
CDK5RAP1-207ENST00000461710 NCOA1Q15788 1441 aa15.86■□□□□ 0.13
CDK5RAP1-207ENST00000461710 KIF21AQ7Z4S6 1674 aa15.85■□□□□ 0.13
CDK5RAP1-207ENST00000461710 ERICH6Q7L0X2 663 aa15.84■□□□□ 0.13
CDK5RAP1-207ENST00000461710 PRKRIP1Q9H875 184 aaPredicted RBP15.84■□□□□ 0.13
CDK5RAP1-207ENST00000461710 ABCA5Q8WWZ7 1642 aa15.83■□□□□ 0.13
CDK5RAP1-207ENST00000461710 CCDC7Q96M83 1385 aa15.83■□□□□ 0.12
CDK5RAP1-207ENST00000461710 C11orf95C9JLR9 678 aaPredicted RBP15.83■□□□□ 0.12
CDK5RAP1-207ENST00000461710 ZBED9Q6R2W3 1325 aa15.82■□□□□ 0.12
CDK5RAP1-207ENST00000461710 CHIC2Q9UKJ5 165 aa15.82■□□□□ 0.12
CDK5RAP1-207ENST00000461710 L3MBTL2Q969R5 705 aa15.81■□□□□ 0.12
CDK5RAP1-207ENST00000461710 NESP48681 1621 aa15.8■□□□□ 0.12
CDK5RAP1-207ENST00000461710 FAM9BQ8IZU0 186 aa15.8■□□□□ 0.12
CDK5RAP1-207ENST00000461710 MPHOSPH9Q99550 1183 aa15.8■□□□□ 0.12
CDK5RAP1-207ENST00000461710 POLR1AO95602 1720 aaPredicted RBP15.79■□□□□ 0.12
CDK5RAP1-207ENST00000461710 MRS2Q9HD23 443 aa15.79■□□□□ 0.12
CDK5RAP1-207ENST00000461710 B4GALNT3Q6L9W6 998 aa15.78■□□□□ 0.12
CDK5RAP1-207ENST00000461710 URB2Q14146 1524 aaKnown RBP15.78■□□□□ 0.12
CDK5RAP1-207ENST00000461710 TDRD9Q8NDG6 1382 aaKnown RBP15.77■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms