RNA–Protein interactions for RNA: ENST00000460514.1

ABCA4-202, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 5

Gene ABCA4, Length 690 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-202ENST00000460514 ABCA10Q8WWZ4 1543 aa12.67□□□□□ -0.38
ABCA4-202ENST00000460514 TARBP1Q13395 1621 aaKnown RBP12.67□□□□□ -0.38
ABCA4-202ENST00000460514 WDR97A6NE52 1622 aa12.66□□□□□ -0.38
ABCA4-202ENST00000460514 KIF27Q86VH2 1401 aa12.63□□□□□ -0.39
ABCA4-202ENST00000460514 TDRD9Q8NDG6 1382 aaKnown RBP12.6□□□□□ -0.39
ABCA4-202ENST00000460514 EEA1Q15075 1411 aa12.6□□□□□ -0.39
ABCA4-202ENST00000460514 GAPVD1Q14C86 1478 aa12.59□□□□□ -0.39
ABCA4-202ENST00000460514 ZNF608Q9ULD9 1512 aaPredicted RBP12.59□□□□□ -0.39
ABCA4-202ENST00000460514 PIP4P2Q8N4L2 257 aa12.59□□□□□ -0.39
ABCA4-202ENST00000460514 EIF4G3O43432 1585 aaKnown RBP12.59□□□□□ -0.39
ABCA4-202ENST00000460514 ABCA5Q8WWZ7 1642 aa12.59□□□□□ -0.39
ABCA4-202ENST00000460514 PLSCR2Q9NRY7 297 aa12.57□□□□□ -0.4
ABCA4-202ENST00000460514 AQRO60306 1485 aaKnown RBP eCLIP12.57□□□□□ -0.4
ABCA4-202ENST00000460514 GRIN2BQ13224 1484 aa12.56□□□□□ -0.4
ABCA4-202ENST00000460514 ERICH3Q5RHP9 1530 aa12.54□□□□□ -0.4
ABCA4-202ENST00000460514 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.54□□□□□ -0.4
ABCA4-202ENST00000460514 HNRNPUL2Q1KMD3 747 aaKnown RBP12.54□□□□□ -0.4
ABCA4-202ENST00000460514 PBRM1Q86U86 1689 aa12.53□□□□□ -0.4
ABCA4-202ENST00000460514 MAGI1Q96QZ7 1491 aaPredicted RBP12.51□□□□□ -0.41
ABCA4-202ENST00000460514 CSRNP3Q8WYN3 585 aa12.5□□□□□ -0.41
ABCA4-202ENST00000460514 IGF1RP08069 1367 aa12.5□□□□□ -0.41
ABCA4-202ENST00000460514 RUSC2Q8N2Y8 1516 aa12.5□□□□□ -0.41
ABCA4-202ENST00000460514 CUL7Q14999 1698 aa12.49□□□□□ -0.41
ABCA4-202ENST00000460514 SNAPC4Q5SXM2 1469 aa12.48□□□□□ -0.41
ABCA4-202ENST00000460514 FAM9AQ8IZU1 332 aaPredicted RBP12.48□□□□□ -0.41
ABCA4-202ENST00000460514 AKT1S1Q96B36 256 aa12.48□□□□□ -0.41
ABCA4-202ENST00000460514 FHAD1B1AJZ9 1412 aa12.47□□□□□ -0.41
ABCA4-202ENST00000460514 CARMIL1Q5VZK9 1371 aa12.45□□□□□ -0.42
ABCA4-202ENST00000460514 ADAMTS12P58397 1594 aa12.45□□□□□ -0.42
ABCA4-202ENST00000460514 SYNJ2O15056 1496 aa12.45□□□□□ -0.42
ABCA4-202ENST00000460514 CHMP7Q8WUX9 453 aaPredicted RBP12.44□□□□□ -0.42
ABCA4-202ENST00000460514 SLC4A2P04920 1241 aa12.43□□□□□ -0.42
ABCA4-202ENST00000460514 LHX8Q68G74 356 aa12.42□□□□□ -0.42
ABCA4-202ENST00000460514 PRXQ9BXM0 1461 aa12.41□□□□□ -0.42
ABCA4-202ENST00000460514 RAPGEF2Q9Y4G8 1499 aa12.41□□□□□ -0.42
ABCA4-202ENST00000460514 FBLN2P98095 1184 aa12.41□□□□□ -0.42
ABCA4-202ENST00000460514 SAMD1Q6SPF0 538 aaPredicted RBP12.4□□□□□ -0.42
ABCA4-202ENST00000460514 KIF21BO75037 1637 aa12.4□□□□□ -0.42
ABCA4-202ENST00000460514 GRIN2AQ12879 1464 aa12.39□□□□□ -0.43
ABCA4-202ENST00000460514 EVX2Q03828 476 aa12.38□□□□□ -0.43
ABCA4-202ENST00000460514 CHD1O14646 1710 aa12.37□□□□□ -0.43
ABCA4-202ENST00000460514 GOLGA3Q08378 1498 aa12.36□□□□□ -0.43
ABCA4-202ENST00000460514 POLA2Q14181 598 aa12.35□□□□□ -0.43
ABCA4-202ENST00000460514 REM2Q8IYK8 340 aaPredicted RBP12.35□□□□□ -0.43
ABCA4-202ENST00000460514 FXR2P51116 673 aaKnown RBP eCLIP12.34□□□□□ -0.43
ABCA4-202ENST00000460514 OSCARQ8IYS5 282 aa12.33□□□□□ -0.44
ABCA4-202ENST00000460514 NUP160Q12769 1436 aa12.31□□□□□ -0.44
ABCA4-202ENST00000460514 UBTFP17480 764 aaKnown RBP12.31□□□□□ -0.44
ABCA4-202ENST00000460514 CEP170Q5SW79 1584 aa12.29□□□□□ -0.44
ABCA4-202ENST00000460514 KIAA0586Q9BVV6 1533 aa12.28□□□□□ -0.44
ABCA4-202ENST00000460514 CTTNBP2Q8WZ74 1663 aa12.27□□□□□ -0.45
ABCA4-202ENST00000460514 EHMT2Q96KQ7 1210 aa12.27□□□□□ -0.45
ABCA4-202ENST00000460514 TNIKQ9UKE5 1360 aa12.25□□□□□ -0.45
ABCA4-202ENST00000460514 IQGAP2Q13576 1575 aa12.25□□□□□ -0.45
ABCA4-202ENST00000460514 PITPNM1O00562 1244 aa12.24□□□□□ -0.45
ABCA4-202ENST00000460514 CLASP1Q7Z460 1538 aa12.24□□□□□ -0.45
ABCA4-202ENST00000460514 LOC105371045A0A1W2PR82 267 aa12.22□□□□□ -0.45
ABCA4-202ENST00000460514 JPH4Q96JJ6 628 aa12.21□□□□□ -0.45
ABCA4-202ENST00000460514 UGGT2Q9NYU1 1516 aa12.19□□□□□ -0.46
ABCA4-202ENST00000460514 SHROOM2Q13796 1616 aa12.19□□□□□ -0.46
ABCA4-202ENST00000460514 CARMIL2Q6F5E8 1435 aa12.18□□□□□ -0.46
ABCA4-202ENST00000460514 SLC4A1APQ9BWU0 796 aaKnown RBP12.17□□□□□ -0.46
ABCA4-202ENST00000460514 EFCAB5A4FU69 1503 aa12.16□□□□□ -0.46
ABCA4-202ENST00000460514 PRG4Q92954 1404 aaPredicted RBP12.15□□□□□ -0.46
ABCA4-202ENST00000460514 RANGAP1P46060 587 aaPredicted RBP12.14□□□□□ -0.47
ABCA4-202ENST00000460514 CLIP1P30622 1438 aa12.13□□□□□ -0.47
ABCA4-202ENST00000460514 CEP162Q5TB80 1403 aa12.13□□□□□ -0.47
ABCA4-202ENST00000460514 SAMD9Q5K651 1589 aa12.12□□□□□ -0.47
ABCA4-202ENST00000460514 KIAA0556O60303 1618 aa12.11□□□□□ -0.47
ABCA4-202ENST00000460514 DISP1Q96F81 1524 aa12.11□□□□□ -0.47
ABCA4-202ENST00000460514 ARHGEF11O15085 1522 aa12.09□□□□□ -0.47
ABCA4-202ENST00000460514 ARHGAP35Q9NRY4 1499 aa12.08□□□□□ -0.47
ABCA4-202ENST00000460514 GABBR2O75899 941 aa12.08□□□□□ -0.48
ABCA4-202ENST00000460514 P3H3Q8IVL6 736 aa12.07□□□□□ -0.48
ABCA4-202ENST00000460514 PTPRGP23470 1445 aa12.06□□□□□ -0.48
ABCA4-202ENST00000460514 DNAJC5Q9H3Z4 198 aa12.06□□□□□ -0.48
ABCA4-202ENST00000460514 ERCC6L2Q5T890 1561 aa12.05□□□□□ -0.48
ABCA4-202ENST00000460514 FHOD3Q2V2M9 1422 aa12.05□□□□□ -0.48
ABCA4-202ENST00000460514 FMN1Q68DA7 1419 aa12.05□□□□□ -0.48
ABCA4-202ENST00000460514 RIMBP3CA6NJZ7 1639 aa12.05□□□□□ -0.48
ABCA4-202ENST00000460514 RIMBP3BA6NNM3 1639 aa12.05□□□□□ -0.48
ABCA4-202ENST00000460514 RIMBP3Q9UFD9 1639 aa12.05□□□□□ -0.48
ABCA4-202ENST00000460514 ZBTB12Q9Y330 459 aaPredicted RBP12.04□□□□□ -0.48
ABCA4-202ENST00000460514 ARAP1Q96P48 1450 aa12.02□□□□□ -0.48
ABCA4-202ENST00000460514 TTBK1Q5TCY1 1321 aaPredicted RBP12.02□□□□□ -0.49
ABCA4-202ENST00000460514 C19orf67A6NJJ6 358 aa11.99□□□□□ -0.49
ABCA4-202ENST00000460514 VPS8Q8N3P4 1428 aa11.98□□□□□ -0.49
ABCA4-202ENST00000460514 UACAQ9BZF9 1416 aa11.98□□□□□ -0.49
ABCA4-202ENST00000460514 CYB5RLQ6IPT4 315 aa11.97□□□□□ -0.49
ABCA4-202ENST00000460514 RAPGEF6Q8TEU7 1601 aa11.97□□□□□ -0.49
ABCA4-202ENST00000460514 ABCA8O94911 1581 aa11.96□□□□□ -0.49
ABCA4-202ENST00000460514 UHRF1BP1LA0JNW5 1464 aa11.96□□□□□ -0.49
ABCA4-202ENST00000460514 ABCC2Q92887 1545 aa11.96□□□□□ -0.5
ABCA4-202ENST00000460514 PLB1Q6P1J6 1458 aa11.95□□□□□ -0.5
ABCA4-202ENST00000460514 FYCO1Q9BQS8 1478 aa11.95□□□□□ -0.5
ABCA4-202ENST00000460514 CASKIN1Q8WXD9 1431 aa11.95□□□□□ -0.5
ABCA4-202ENST00000460514 HECW1Q76N89 1606 aa11.95□□□□□ -0.5
ABCA4-202ENST00000460514 NPM1P06748 294 aaKnown RBP eCLIP11.94□□□□□ -0.5
ABCA4-202ENST00000460514 ATP1B4Q9UN42 357 aaPredicted RBP11.94□□□□□ -0.5
ABCA4-202ENST00000460514 PRKAR2AP13861 404 aaKnown RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms