RNA–Protein interactions for RNA: ENST00000459645.1

RGPD6-206, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

TSL 3

Gene RGPD6, Length 477 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-206ENST00000459645 NPM1P06748 294 aaKnown RBP eCLIP7.8□□□□□ -1.16
RGPD6-206ENST00000459645 FGD5Q6ZNL6 1462 aa7.8□□□□□ -1.16
RGPD6-206ENST00000459645 COL17A1Q9UMD9 1497 aaPredicted RBP7.79□□□□□ -1.16
RGPD6-206ENST00000459645 NUP160Q12769 1436 aa7.78□□□□□ -1.16
RGPD6-206ENST00000459645 WDR97A6NE52 1622 aa7.78□□□□□ -1.16
RGPD6-206ENST00000459645 PRG4Q92954 1404 aaPredicted RBP7.78□□□□□ -1.16
RGPD6-206ENST00000459645 GRIN2AQ12879 1464 aa7.77□□□□□ -1.17
RGPD6-206ENST00000459645 SHROOM2Q13796 1616 aa7.76□□□□□ -1.17
RGPD6-206ENST00000459645 TSPOAP1O95153 1857 aa7.76□□□□□ -1.17
RGPD6-206ENST00000459645 CERKQ8TCT0 537 aa7.73□□□□□ -1.17
RGPD6-206ENST00000459645 ADCY10Q96PN6 1610 aa7.73□□□□□ -1.17
RGPD6-206ENST00000459645 JPH4Q96JJ6 628 aa7.72□□□□□ -1.17
RGPD6-206ENST00000459645 CUX1P39880 1505 aa7.71□□□□□ -1.18
RGPD6-206ENST00000459645 SPATA31D1Q6ZQQ2 1576 aa7.71□□□□□ -1.18
RGPD6-206ENST00000459645 PBRM1Q86U86 1689 aa7.7□□□□□ -1.18
RGPD6-206ENST00000459645 PPRC1Q5VV67 1664 aaKnown RBP7.69□□□□□ -1.18
RGPD6-206ENST00000459645 TOP2BQ02880 1626 aa7.68□□□□□ -1.18
RGPD6-206ENST00000459645 ADAMTS12P58397 1594 aa7.67□□□□□ -1.18
RGPD6-206ENST00000459645 ABCA5Q8WWZ7 1642 aa7.67□□□□□ -1.18
RGPD6-206ENST00000459645 ABCA10Q8WWZ4 1543 aa7.66□□□□□ -1.18
RGPD6-206ENST00000459645 FHAD1B1AJZ9 1412 aa7.65□□□□□ -1.18
RGPD6-206ENST00000459645 HSPA2P54652 639 aa7.65□□□□□ -1.18
RGPD6-206ENST00000459645 PTPRMP28827 1452 aa7.64□□□□□ -1.19
RGPD6-206ENST00000459645 ASXL2Q76L83 1435 aa7.64□□□□□ -1.19
RGPD6-206ENST00000459645 PCF11O94913 1555 aaKnown RBP7.63□□□□□ -1.19
RGPD6-206ENST00000459645 GLI2P10070 1586 aa7.63□□□□□ -1.19
RGPD6-206ENST00000459645 PLB1Q6P1J6 1458 aa7.6□□□□□ -1.19
RGPD6-206ENST00000459645 ABCC2Q92887 1545 aa7.59□□□□□ -1.19
RGPD6-206ENST00000459645 TEX14Q8IWB6 1497 aa7.58□□□□□ -1.2
RGPD6-206ENST00000459645 EPRSP07814 1512 aaKnown RBP7.57□□□□□ -1.2
RGPD6-206ENST00000459645 RUSC2Q8N2Y8 1516 aa7.57□□□□□ -1.2
RGPD6-206ENST00000459645 KIF21BO75037 1637 aa7.57□□□□□ -1.2
RGPD6-206ENST00000459645 PTPRGP23470 1445 aa7.57□□□□□ -1.2
RGPD6-206ENST00000459645 MAP3K4Q9Y6R4 1608 aa7.56□□□□□ -1.2
RGPD6-206ENST00000459645 ADAMTSL3P82987 1691 aa7.54□□□□□ -1.2
RGPD6-206ENST00000459645 WRNQ14191 1432 aaPredicted RBP eCLIP7.52□□□□□ -1.2
RGPD6-206ENST00000459645 ERICH3Q5RHP9 1530 aa7.52□□□□□ -1.2
RGPD6-206ENST00000459645 PLPPR3Q6T4P5 718 aa7.52□□□□□ -1.21
RGPD6-206ENST00000459645 KIAA0586Q9BVV6 1533 aa7.5□□□□□ -1.21
RGPD6-206ENST00000459645 UHRF1BP1LA0JNW5 1464 aa7.49□□□□□ -1.21
RGPD6-206ENST00000459645 MADDQ8WXG6 1647 aa7.49□□□□□ -1.21
RGPD6-206ENST00000459645 TNIKQ9UKE5 1360 aa7.48□□□□□ -1.21
RGPD6-206ENST00000459645 CD109Q6YHK3 1445 aa7.48□□□□□ -1.21
RGPD6-206ENST00000459645 ERICH6Q7L0X2 663 aa7.48□□□□□ -1.21
RGPD6-206ENST00000459645 ARID4BQ4LE39 1312 aaPredicted RBP7.48□□□□□ -1.21
RGPD6-206ENST00000459645 CUL7Q14999 1698 aa7.47□□□□□ -1.21
RGPD6-206ENST00000459645 UACAQ9BZF9 1416 aa7.47□□□□□ -1.21
RGPD6-206ENST00000459645 MAGI3Q5TCQ9 1506 aa7.47□□□□□ -1.21
RGPD6-206ENST00000459645 KDM5BQ9UGL1 1544 aa7.47□□□□□ -1.21
RGPD6-206ENST00000459645 RAPGEF3O95398 923 aa7.45□□□□□ -1.22
RGPD6-206ENST00000459645 KCNH8Q96L42 1107 aa7.45□□□□□ -1.22
RGPD6-206ENST00000459645 BCORL1Q5H9F3 1711 aa7.44□□□□□ -1.22
RGPD6-206ENST00000459645 WDR7Q9Y4E6 1490 aa7.44□□□□□ -1.22
RGPD6-206ENST00000459645 YEATS2Q9ULM3 1422 aa7.44□□□□□ -1.22
RGPD6-206ENST00000459645 ARAP3Q8WWN8 1544 aa7.43□□□□□ -1.22
RGPD6-206ENST00000459645 RIMS1Q86UR5 1692 aaKnown RBP7.42□□□□□ -1.22
RGPD6-206ENST00000459645 DMRT2Q9Y5R5 561 aa7.42□□□□□ -1.22
RGPD6-206ENST00000459645 CARMIL2Q6F5E8 1435 aa7.42□□□□□ -1.22
RGPD6-206ENST00000459645 SRCAPQ6ZRS2 3230 aa7.41□□□□□ -1.22
RGPD6-206ENST00000459645 DAXXQ9UER7 740 aaPredicted RBP7.41□□□□□ -1.22
RGPD6-206ENST00000459645 MED1Q15648 1581 aaPredicted RBP7.41□□□□□ -1.22
RGPD6-206ENST00000459645 ZCCHC11Q5TAX3 1644 aaKnown RBP7.41□□□□□ -1.22
RGPD6-206ENST00000459645 LTBP4Q8N2S1 1624 aa7.41□□□□□ -1.22
RGPD6-206ENST00000459645 UBAP1LF5GYI3 381 aa7.4□□□□□ -1.22
RGPD6-206ENST00000459645 CHIC1Q5VXU3 224 aa7.39□□□□□ -1.23
RGPD6-206ENST00000459645 HSPA1LP34931 641 aa7.38□□□□□ -1.23
RGPD6-206ENST00000459645 DISP1Q96F81 1524 aa7.37□□□□□ -1.23
RGPD6-206ENST00000459645 IGF1RP08069 1367 aa7.37□□□□□ -1.23
RGPD6-206ENST00000459645 CEBPAP49715 358 aaPredicted RBP7.37□□□□□ -1.23
RGPD6-206ENST00000459645 STRCQ7RTU9 1775 aa7.37□□□□□ -1.23
RGPD6-206ENST00000459645 IQSEC2Q5JU85 1478 aa7.36□□□□□ -1.23
RGPD6-206ENST00000459645 PTPRTO14522 1441 aa7.36□□□□□ -1.23
RGPD6-206ENST00000459645 MLECQ14165 292 aa7.36□□□□□ -1.23
RGPD6-206ENST00000459645 PHF23Q9BUL5 403 aaPredicted RBP7.36□□□□□ -1.23
RGPD6-206ENST00000459645 CFAP43Q8NDM7 1665 aa7.35□□□□□ -1.23
RGPD6-206ENST00000459645 BIVM-ERCC5R4GMW8 1640 aa7.34□□□□□ -1.23
RGPD6-206ENST00000459645 FRMPD1Q5SYB0 1578 aa7.34□□□□□ -1.23
RGPD6-206ENST00000459645 PHLDB1Q86UU1 1377 aa7.33□□□□□ -1.24
RGPD6-206ENST00000459645 ZNF335Q9H4Z2 1342 aaPredicted RBP7.32□□□□□ -1.24
RGPD6-206ENST00000459645 ARHGEF40Q8TER5 1519 aa7.32□□□□□ -1.24
RGPD6-206ENST00000459645 SCAF1Q9H7N4 1312 aaKnown RBP7.31□□□□□ -1.24
RGPD6-206ENST00000459645 PIP4K2BP78356 416 aa7.31□□□□□ -1.24
RGPD6-206ENST00000459645 POGZQ7Z3K3 1410 aa7.31□□□□□ -1.24
RGPD6-206ENST00000459645 RGS17Q9UGC6 210 aaPredicted RBP7.31□□□□□ -1.24
RGPD6-206ENST00000459645 SIGLEC1Q9BZZ2 1709 aa7.3□□□□□ -1.24
RGPD6-206ENST00000459645 IQGAP2Q13576 1575 aa7.3□□□□□ -1.24
RGPD6-206ENST00000459645 TTC37Q6PGP7 1564 aa7.3□□□□□ -1.24
RGPD6-206ENST00000459645 UHRF1BP1Q6BDS2 1440 aa7.3□□□□□ -1.24
RGPD6-206ENST00000459645 ARID3CA6NKF2 412 aa7.3□□□□□ -1.24
RGPD6-206ENST00000459645 APLP2Q06481 763 aa7.3□□□□□ -1.24
RGPD6-206ENST00000459645 FANCAO15360 1455 aa7.3□□□□□ -1.24
RGPD6-206ENST00000459645 PREX1Q8TCU6 1659 aa7.29□□□□□ -1.24
RGPD6-206ENST00000459645 NEO1Q92859 1461 aa7.29□□□□□ -1.24
RGPD6-206ENST00000459645 AKNAQ7Z591 1439 aa7.28□□□□□ -1.24
RGPD6-206ENST00000459645 CARMIL1Q5VZK9 1371 aa7.28□□□□□ -1.24
RGPD6-206ENST00000459645 NCOA1Q15788 1441 aa7.27□□□□□ -1.25
RGPD6-206ENST00000459645 KIAA0556O60303 1618 aa7.26□□□□□ -1.25
RGPD6-206ENST00000459645 UGGT2Q9NYU1 1516 aa7.26□□□□□ -1.25
RGPD6-206ENST00000459645 ARHGEF12Q9NZN5 1544 aa7.26□□□□□ -1.25
RGPD6-206ENST00000459645 DENND4BO75064 1496 aaPredicted RBP7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms