RNA–Protein interactions for RNA: ENST00000458358.5

ITGA6-207, Transcript of integrin subunit alpha 6, humanhuman

TSL 5 BASIC

Gene ITGA6, Length 3,261 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-207ENST00000458358 CLSPNQ9HAW4 1339 aa14.34□□□□□ -0.11
ITGA6-207ENST00000458358 PRXQ9BXM0 1461 aa14.34□□□□□ -0.11
ITGA6-207ENST00000458358 KANK4Q5T7N3 995 aaPredicted RBP14.33□□□□□ -0.12
ITGA6-207ENST00000458358 TSHZ2Q9NRE2 1034 aa14.33□□□□□ -0.12
ITGA6-207ENST00000458358 DNMBPQ6XZF7 1577 aa14.32□□□□□ -0.12
ITGA6-207ENST00000458358 VPS8Q8N3P4 1428 aa14.32□□□□□ -0.12
ITGA6-207ENST00000458358 KIF21AQ7Z4S6 1674 aa14.31□□□□□ -0.12
ITGA6-207ENST00000458358 KIF21BO75037 1637 aa14.3□□□□□ -0.12
ITGA6-207ENST00000458358 ANP32EQ9BTT0 268 aa14.28□□□□□ -0.12
ITGA6-207ENST00000458358 BCANQ96GW7 911 aa14.27□□□□□ -0.12
ITGA6-207ENST00000458358 GAPVD1Q14C86 1478 aa14.27□□□□□ -0.12
ITGA6-207ENST00000458358 CHMP7Q8WUX9 453 aaPredicted RBP14.27□□□□□ -0.13
ITGA6-207ENST00000458358 DHX57Q6P158 1386 aaKnown RBP14.25□□□□□ -0.13
ITGA6-207ENST00000458358 ZNF608Q9ULD9 1512 aaPredicted RBP14.25□□□□□ -0.13
ITGA6-207ENST00000458358 ARAP1Q96P48 1450 aa14.24□□□□□ -0.13
ITGA6-207ENST00000458358 MRC2Q9UBG0 1479 aa14.24□□□□□ -0.13
ITGA6-207ENST00000458358 ABCA10Q8WWZ4 1543 aa14.23□□□□□ -0.13
ITGA6-207ENST00000458358 FHOD3Q2V2M9 1422 aa14.23□□□□□ -0.13
ITGA6-207ENST00000458358 PRDM2Q13029 1718 aa14.22□□□□□ -0.13
ITGA6-207ENST00000458358 KCNH8Q96L42 1107 aa14.22□□□□□ -0.13
ITGA6-207ENST00000458358 FAM50AQ14320 339 aaKnown RBP14.2□□□□□ -0.14
ITGA6-207ENST00000458358 ARHGAP35Q9NRY4 1499 aa14.18□□□□□ -0.14
ITGA6-207ENST00000458358 ERICH3Q5RHP9 1530 aa14.17□□□□□ -0.14
ITGA6-207ENST00000458358 BCL11AQ9H165 835 aa14.16□□□□□ -0.14
ITGA6-207ENST00000458358 FKBP8Q14318 412 aa14.16□□□□□ -0.14
ITGA6-207ENST00000458358 DDX10Q13206 875 aaKnown RBP14.08□□□□□ -0.16
ITGA6-207ENST00000458358 NEFLP07196 543 aa14.07□□□□□ -0.16
ITGA6-207ENST00000458358 SNAPC4Q5SXM2 1469 aa14.07□□□□□ -0.16
ITGA6-207ENST00000458358 GRIN2BQ13224 1484 aa14.06□□□□□ -0.16
ITGA6-207ENST00000458358 IFT140Q96RY7 1462 aa14.06□□□□□ -0.16
ITGA6-207ENST00000458358 RBM19Q9Y4C8 960 aaKnown RBP14.03□□□□□ -0.16
ITGA6-207ENST00000458358 FHAD1B1AJZ9 1412 aa14.03□□□□□ -0.16
ITGA6-207ENST00000458358 TARBP1Q13395 1621 aaKnown RBP14.03□□□□□ -0.16
ITGA6-207ENST00000458358 TRIM52Q96A61 297 aa14.02□□□□□ -0.16
ITGA6-207ENST00000458358 MTUS2Q5JR59 1369 aa14.01□□□□□ -0.17
ITGA6-207ENST00000458358 JPH4Q96JJ6 628 aa14□□□□□ -0.17
ITGA6-207ENST00000458358 CCNB3Q8WWL7 1395 aa14□□□□□ -0.17
ITGA6-207ENST00000458358 HIRIP3Q9BW71 556 aaPredicted RBP14□□□□□ -0.17
ITGA6-207ENST00000458358 WDR62O43379 1518 aa13.99□□□□□ -0.17
ITGA6-207ENST00000458358 CHIC2Q9UKJ5 165 aa13.99□□□□□ -0.17
ITGA6-207ENST00000458358 ABCA5Q8WWZ7 1642 aa13.99□□□□□ -0.17
ITGA6-207ENST00000458358 RRBP1Q9P2E9 1410 aaKnown RBP13.99□□□□□ -0.17
ITGA6-207ENST00000458358 RAB3GAP2Q9H2M9 1393 aa13.97□□□□□ -0.17
ITGA6-207ENST00000458358 SIN3AQ96ST3 1273 aa13.96□□□□□ -0.17
ITGA6-207ENST00000458358 ZNF777Q9ULD5 760 aaPredicted RBP13.96□□□□□ -0.17
ITGA6-207ENST00000458358 CUL7Q14999 1698 aa13.95□□□□□ -0.18
ITGA6-207ENST00000458358 PHLDB1Q86UU1 1377 aa13.93□□□□□ -0.18
ITGA6-207ENST00000458358 EIF4G3O43432 1585 aaKnown RBP13.93□□□□□ -0.18
ITGA6-207ENST00000458358 FMN1Q68DA7 1419 aa13.92□□□□□ -0.18
ITGA6-207ENST00000458358 WDR97A6NE52 1622 aa13.91□□□□□ -0.18
ITGA6-207ENST00000458358 ANP32CO43423 234 aa13.91□□□□□ -0.18
ITGA6-207ENST00000458358 THOC2Q8NI27 1593 aaKnown RBP13.91□□□□□ -0.18
ITGA6-207ENST00000458358 PCF11O94913 1555 aaKnown RBP13.9□□□□□ -0.18
ITGA6-207ENST00000458358 GRIN2AQ12879 1464 aa13.9□□□□□ -0.19
ITGA6-207ENST00000458358 MAPKBP1O60336 1514 aa13.89□□□□□ -0.19
ITGA6-207ENST00000458358 PBRM1Q86U86 1689 aa13.88□□□□□ -0.19
ITGA6-207ENST00000458358 PPP1R15AO75807 674 aaPredicted RBP13.88□□□□□ -0.19
ITGA6-207ENST00000458358 RRP7BPQ9NSQ0 103 aa13.88□□□□□ -0.19
ITGA6-207ENST00000458358 LRRC9Q6ZRR7 1453 aa13.87□□□□□ -0.19
ITGA6-207ENST00000458358 ADAMTS12P58397 1594 aa13.87□□□□□ -0.19
ITGA6-207ENST00000458358 MSH5O43196 834 aa13.86□□□□□ -0.19
ITGA6-207ENST00000458358 ERICH6Q7L0X2 663 aa13.86□□□□□ -0.19
ITGA6-207ENST00000458358 CASKIN1Q8WXD9 1431 aa13.85□□□□□ -0.19
ITGA6-207ENST00000458358 SETD5Q9C0A6 1442 aa13.85□□□□□ -0.19
ITGA6-207ENST00000458358 IRX6P78412 446 aaPredicted RBP13.85□□□□□ -0.19
ITGA6-207ENST00000458358 IQGAP2Q13576 1575 aa13.85□□□□□ -0.19
ITGA6-207ENST00000458358 SYNJ2O15056 1496 aa13.84□□□□□ -0.19
ITGA6-207ENST00000458358 CCER2I3L3R5 266 aa13.84□□□□□ -0.19
ITGA6-207ENST00000458358 TIAM1Q13009 1591 aa13.83□□□□□ -0.2
ITGA6-207ENST00000458358 CDK13Q14004 1512 aaKnown RBP13.83□□□□□ -0.2
ITGA6-207ENST00000458358 CTTNBP2Q8WZ74 1663 aa13.82□□□□□ -0.2
ITGA6-207ENST00000458358 KIAA0586Q9BVV6 1533 aa13.82□□□□□ -0.2
ITGA6-207ENST00000458358 ZNF644Q9H582 1327 aaPredicted RBP13.82□□□□□ -0.2
ITGA6-207ENST00000458358 CDK11AQ9UQ88 783 aaPredicted RBP13.82□□□□□ -0.2
ITGA6-207ENST00000458358 PLB1Q6P1J6 1458 aa13.8□□□□□ -0.2
ITGA6-207ENST00000458358 EFCAB5A4FU69 1503 aa13.8□□□□□ -0.2
ITGA6-207ENST00000458358 MAGI1Q96QZ7 1491 aaPredicted RBP13.8□□□□□ -0.2
ITGA6-207ENST00000458358 HNRNPUQ00839 825 aaKnown RBP eCLIP13.79□□□□□ -0.2
ITGA6-207ENST00000458358 FYCO1Q9BQS8 1478 aa13.79□□□□□ -0.2
ITGA6-207ENST00000458358 PLEKHD1A6NEE1 506 aa13.79□□□□□ -0.2
ITGA6-207ENST00000458358 PRG4Q92954 1404 aaPredicted RBP13.79□□□□□ -0.2
ITGA6-207ENST00000458358 CARMIL2Q6F5E8 1435 aa13.78□□□□□ -0.2
ITGA6-207ENST00000458358 CFDP1Q9UEE9 299 aaPredicted RBP13.76□□□□□ -0.21
ITGA6-207ENST00000458358 CEP170Q5SW79 1584 aa13.75□□□□□ -0.21
ITGA6-207ENST00000458358 PTPRGP23470 1445 aa13.75□□□□□ -0.21
ITGA6-207ENST00000458358 DISP1Q96F81 1524 aa13.75□□□□□ -0.21
ITGA6-207ENST00000458358 TIMELESSQ9UNS1 1208 aa13.74□□□□□ -0.21
ITGA6-207ENST00000458358 NCOA2Q15596 1464 aa13.73□□□□□ -0.21
ITGA6-207ENST00000458358 FANCIQ9NVI1 1328 aa13.73□□□□□ -0.21
ITGA6-207ENST00000458358 TONSLQ96HA7 1378 aa13.73□□□□□ -0.21
ITGA6-207ENST00000458358 EPRSP07814 1512 aaKnown RBP13.72□□□□□ -0.21
ITGA6-207ENST00000458358 MAP3K1Q13233 1512 aa13.72□□□□□ -0.21
ITGA6-207ENST00000458358 FOXD1Q16676 465 aa13.71□□□□□ -0.22
ITGA6-207ENST00000458358 MYT1LQ9UL68 1186 aa13.71□□□□□ -0.22
ITGA6-207ENST00000458358 FGD6Q6ZV73 1430 aa13.7□□□□□ -0.22
ITGA6-207ENST00000458358 SAMD9Q5K651 1589 aa13.7□□□□□ -0.22
ITGA6-207ENST00000458358 NUP160Q12769 1436 aa13.68□□□□□ -0.22
ITGA6-207ENST00000458358 MAGI3Q5TCQ9 1506 aa13.67□□□□□ -0.22
ITGA6-207ENST00000458358 UGGT2Q9NYU1 1516 aa13.66□□□□□ -0.22
ITGA6-207ENST00000458358 HNRNPMP52272 730 aaKnown RBP eCLIP13.66□□□□□ -0.221e-6■■■■□ 22.9
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms