RNA–Protein interactions for RNA: ENST00000457602.1

LINC01888-202, Transcript of long intergenic non-protein coding RNA 1888, humanhuman

TSL 2 BASIC

Gene LINC01888, Length 574 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01888-202ENST00000457602 SPDYE1Q8NFV5 336 aaPredicted RBP15.45■□□□□ 0.06
LINC01888-202ENST00000457602 RSF1Q96T23 1441 aaPredicted RBP15.4■□□□□ 0.06
LINC01888-202ENST00000457602 MRC2Q9UBG0 1479 aa15.4■□□□□ 0.06
LINC01888-202ENST00000457602 PROM2Q8N271 834 aa15.38■□□□□ 0.05
LINC01888-202ENST00000457602 CEP164Q9UPV0 1460 aa15.35■□□□□ 0.05
LINC01888-202ENST00000457602 CLEC11AQ9Y240 323 aa15.35■□□□□ 0.05
LINC01888-202ENST00000457602 FXR2P51116 673 aaKnown RBP eCLIP15.34■□□□□ 0.05
LINC01888-202ENST00000457602 FANCD2Q9BXW9 1451 aa15.33■□□□□ 0.05
LINC01888-202ENST00000457602 WDR62O43379 1518 aa15.33■□□□□ 0.05
LINC01888-202ENST00000457602 TOP2AP11388 1531 aaKnown RBP15.33■□□□□ 0.05
LINC01888-202ENST00000457602 PIP4P2Q8N4L2 257 aa15.33■□□□□ 0.04
LINC01888-202ENST00000457602 CFTRP13569 1480 aa15.31■□□□□ 0.04
LINC01888-202ENST00000457602 FKBP8Q14318 412 aa15.28■□□□□ 0.04
LINC01888-202ENST00000457602 URB2Q14146 1524 aaKnown RBP15.18■□□□□ 0.02
LINC01888-202ENST00000457602 PRR29P0C7W0 189 aa15.18■□□□□ 0.02
LINC01888-202ENST00000457602 STAG3Q9UJ98 1225 aa15.18■□□□□ 0.02
LINC01888-202ENST00000457602 CCDC88BA6NC98 1476 aa15.18■□□□□ 0.02
LINC01888-202ENST00000457602 TRIM41Q8WV44 630 aa15.16■□□□□ 0.02
LINC01888-202ENST00000457602 PRDM2Q13029 1718 aa15.13■□□□□ 0.01
LINC01888-202ENST00000457602 PRKAR2AP13861 404 aaKnown RBP15.12■□□□□ 0.01
LINC01888-202ENST00000457602 CHADLQ6NUI6 762 aa15.06■□□□□ 0
LINC01888-202ENST00000457602 TOPBP1Q92547 1522 aa15.03■□□□□ -0
LINC01888-202ENST00000457602 IFT140Q96RY7 1462 aa15.03■□□□□ -0
LINC01888-202ENST00000457602 ZNF608Q9ULD9 1512 aaPredicted RBP15.02□□□□□ -0.01
LINC01888-202ENST00000457602 ABCC8Q09428 1581 aa15.01□□□□□ -0.01
LINC01888-202ENST00000457602 CREBZFQ9NS37 354 aa15□□□□□ -0.01
LINC01888-202ENST00000457602 DNMBPQ6XZF7 1577 aa14.97□□□□□ -0.01
LINC01888-202ENST00000457602 HAX1O00165 279 aa14.92□□□□□ -0.02
LINC01888-202ENST00000457602 EIF4G3O43432 1585 aaKnown RBP14.92□□□□□ -0.02
LINC01888-202ENST00000457602 FARP1Q9Y4F1 1045 aaPredicted RBP14.9□□□□□ -0.02
LINC01888-202ENST00000457602 AQRO60306 1485 aaKnown RBP eCLIP14.89□□□□□ -0.03
LINC01888-202ENST00000457602 POLA1P09884 1462 aaPredicted RBP14.88□□□□□ -0.03
LINC01888-202ENST00000457602 TARBP1Q13395 1621 aaKnown RBP14.87□□□□□ -0.03
LINC01888-202ENST00000457602 RIMBP3CA6NJZ7 1639 aa14.86□□□□□ -0.03
LINC01888-202ENST00000457602 RIMBP3BA6NNM3 1639 aa14.86□□□□□ -0.03
LINC01888-202ENST00000457602 RIMBP3Q9UFD9 1639 aa14.86□□□□□ -0.03
LINC01888-202ENST00000457602 MNX1P50219 401 aaPredicted RBP14.86□□□□□ -0.03
LINC01888-202ENST00000457602 SOGA1O94964 1423 aa14.84□□□□□ -0.03
LINC01888-202ENST00000457602 RAD54L2Q9Y4B4 1467 aa14.84□□□□□ -0.03
LINC01888-202ENST00000457602 C19orf67A6NJJ6 358 aa14.83□□□□□ -0.04
LINC01888-202ENST00000457602 SUPT5HO00267 1087 aaKnown RBP14.82□□□□□ -0.04
LINC01888-202ENST00000457602 TDRD9Q8NDG6 1382 aaKnown RBP14.82□□□□□ -0.04
LINC01888-202ENST00000457602 ARHGEF11O15085 1522 aa14.82□□□□□ -0.04
LINC01888-202ENST00000457602 CHD1O14646 1710 aa14.8□□□□□ -0.04
LINC01888-202ENST00000457602 EVX2Q03828 476 aa14.8□□□□□ -0.04
LINC01888-202ENST00000457602 FBXO3Q9UK99 471 aa14.8□□□□□ -0.04
LINC01888-202ENST00000457602 FGD5Q6ZNL6 1462 aa14.8□□□□□ -0.04
LINC01888-202ENST00000457602 CUX1P39880 1505 aa14.77□□□□□ -0.04
LINC01888-202ENST00000457602 CYB5RLQ6IPT4 315 aa14.76□□□□□ -0.05
LINC01888-202ENST00000457602 SP7Q8TDD2 431 aaPredicted RBP14.76□□□□□ -0.05
LINC01888-202ENST00000457602 SNAPC4Q5SXM2 1469 aa14.75□□□□□ -0.05
LINC01888-202ENST00000457602 MIER1Q8N108 512 aa14.73□□□□□ -0.05
LINC01888-202ENST00000457602 CHMP7Q8WUX9 453 aaPredicted RBP14.72□□□□□ -0.05
LINC01888-202ENST00000457602 WDR97A6NE52 1622 aa14.72□□□□□ -0.05
LINC01888-202ENST00000457602 GRIN2BQ13224 1484 aa14.69□□□□□ -0.06
LINC01888-202ENST00000457602 PLCD3Q8N3E9 789 aa14.68□□□□□ -0.06
LINC01888-202ENST00000457602 MAGI1Q96QZ7 1491 aaPredicted RBP14.68□□□□□ -0.06
LINC01888-202ENST00000457602 CD44P16070 742 aaKnown RBP14.67□□□□□ -0.06
LINC01888-202ENST00000457602 ARAP1Q96P48 1450 aa14.67□□□□□ -0.06
LINC01888-202ENST00000457602 NPM1P06748 294 aaKnown RBP eCLIP14.66□□□□□ -0.06
LINC01888-202ENST00000457602 VASPP50552 380 aaPredicted RBP14.66□□□□□ -0.06
LINC01888-202ENST00000457602 SYNJ1O43426 1573 aa14.65□□□□□ -0.06
LINC01888-202ENST00000457602 GAPVD1Q14C86 1478 aa14.64□□□□□ -0.07
LINC01888-202ENST00000457602 PLEKHG5O94827 1062 aa14.64□□□□□ -0.07
LINC01888-202ENST00000457602 SYNJ2O15056 1496 aa14.63□□□□□ -0.07
LINC01888-202ENST00000457602 CLASP1Q7Z460 1538 aa14.62□□□□□ -0.07
LINC01888-202ENST00000457602 PBRM1Q86U86 1689 aa14.61□□□□□ -0.07
LINC01888-202ENST00000457602 ABCA10Q8WWZ4 1543 aa14.61□□□□□ -0.07
LINC01888-202ENST00000457602 ABCA5Q8WWZ7 1642 aa14.58□□□□□ -0.08
LINC01888-202ENST00000457602 WRNQ14191 1432 aaPredicted RBP eCLIP14.58□□□□□ -0.08
LINC01888-202ENST00000457602 ZBTB47Q9UFB7 747 aaPredicted RBP14.55□□□□□ -0.08
LINC01888-202ENST00000457602 TOP2BQ02880 1626 aa14.52□□□□□ -0.08
LINC01888-202ENST00000457602 ZNF579Q8NAF0 562 aaKnown RBP14.52□□□□□ -0.09
LINC01888-202ENST00000457602 ZRANB1Q9UGI0 708 aa14.52□□□□□ -0.09
LINC01888-202ENST00000457602 BIVM-ERCC5R4GMW8 1640 aa14.52□□□□□ -0.09
LINC01888-202ENST00000457602 GRIN2AQ12879 1464 aa14.5□□□□□ -0.09
LINC01888-202ENST00000457602 NUBP1P53384 320 aa14.49□□□□□ -0.09
LINC01888-202ENST00000457602 RASEFQ8IZ41 740 aa14.49□□□□□ -0.09
LINC01888-202ENST00000457602 ADAMTS12P58397 1594 aa14.48□□□□□ -0.09
LINC01888-202ENST00000457602 PAK3O75914 559 aaPredicted RBP14.47□□□□□ -0.09
LINC01888-202ENST00000457602 FHAD1B1AJZ9 1412 aa14.46□□□□□ -0.09
LINC01888-202ENST00000457602 GABBR2O75899 941 aa14.45□□□□□ -0.1
LINC01888-202ENST00000457602 IFNLR1Q8IU57 520 aaPredicted RBP14.45□□□□□ -0.1
LINC01888-202ENST00000457602 CEP170Q5SW79 1584 aa14.43□□□□□ -0.1
LINC01888-202ENST00000457602 NUP160Q12769 1436 aa14.43□□□□□ -0.1
LINC01888-202ENST00000457602 ERICH3Q5RHP9 1530 aa14.43□□□□□ -0.1
LINC01888-202ENST00000457602 TSPYL2Q9H2G4 693 aaPredicted RBP14.42□□□□□ -0.1
LINC01888-202ENST00000457602 ERCC6L2Q5T890 1561 aa14.42□□□□□ -0.1
LINC01888-202ENST00000457602 CCDC61Q9Y6R9 512 aa14.41□□□□□ -0.1
LINC01888-202ENST00000457602 PHF12Q96QT6 1004 aa14.4□□□□□ -0.1
LINC01888-202ENST00000457602 CLCN6P51797 869 aa14.38□□□□□ -0.11
LINC01888-202ENST00000457602 KLHL34Q8N239 644 aa14.37□□□□□ -0.11
LINC01888-202ENST00000457602 SHROOM2Q13796 1616 aa14.34□□□□□ -0.11
LINC01888-202ENST00000457602 JPH4Q96JJ6 628 aa14.34□□□□□ -0.11
LINC01888-202ENST00000457602 PRG4Q92954 1404 aaPredicted RBP14.32□□□□□ -0.12
LINC01888-202ENST00000457602 FAM212AQ96EL1 285 aa14.31□□□□□ -0.12
LINC01888-202ENST00000457602 KIF27Q86VH2 1401 aa14.29□□□□□ -0.12
LINC01888-202ENST00000457602 GALR2O43603 387 aaPredicted RBP14.28□□□□□ -0.12
LINC01888-202ENST00000457602 SPOCK2Q92563 424 aa14.28□□□□□ -0.12
LINC01888-202ENST00000457602 RUSC2Q8N2Y8 1516 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms