RNA–Protein interactions for RNA: ENST00000456210.5

SEMA3B-208, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 2,065 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-208ENST00000456210 WDR62O43379 1518 aa27.31■■□□□ 1.96
SEMA3B-208ENST00000456210 KIF27Q86VH2 1401 aa27.25■■□□□ 1.95
SEMA3B-208ENST00000456210 ANP32EQ9BTT0 268 aa27.25■■□□□ 1.95
SEMA3B-208ENST00000456210 FGD5Q6ZNL6 1462 aa27.23■■□□□ 1.95
SEMA3B-208ENST00000456210 KANK4Q5T7N3 995 aaPredicted RBP27.21■■□□□ 1.95
SEMA3B-208ENST00000456210 POLA1P09884 1462 aaPredicted RBP27.21■■□□□ 1.95
SEMA3B-208ENST00000456210 RAD54L2Q9Y4B4 1467 aa27.18■■□□□ 1.94
SEMA3B-208ENST00000456210 RANGAP1P46060 587 aaPredicted RBP27.17■■□□□ 1.94
SEMA3B-208ENST00000456210 CCNB3Q8WWL7 1395 aa27.17■■□□□ 1.94
SEMA3B-208ENST00000456210 MAPKBP1O60336 1514 aa27.13■■□□□ 1.93
SEMA3B-208ENST00000456210 ARHGAP35Q9NRY4 1499 aa27.04■■□□□ 1.92
SEMA3B-208ENST00000456210 TARBP1Q13395 1621 aaKnown RBP27.03■■□□□ 1.92
SEMA3B-208ENST00000456210 MAP3K1Q13233 1512 aa27.02■■□□□ 1.92
SEMA3B-208ENST00000456210 RAB3GAP2Q9H2M9 1393 aa27.01■■□□□ 1.91
SEMA3B-208ENST00000456210 ZNF608Q9ULD9 1512 aaPredicted RBP27■■□□□ 1.91
SEMA3B-208ENST00000456210 KCNH8Q96L42 1107 aa26.98■■□□□ 1.91
SEMA3B-208ENST00000456210 TDRD9Q8NDG6 1382 aaKnown RBP26.98■■□□□ 1.91
SEMA3B-208ENST00000456210 IFT140Q96RY7 1462 aa26.96■■□□□ 1.91
SEMA3B-208ENST00000456210 TIAM1Q13009 1591 aa26.94■■□□□ 1.9
SEMA3B-208ENST00000456210 IGF1RP08069 1367 aa26.94■■□□□ 1.9
SEMA3B-208ENST00000456210 AQRO60306 1485 aaKnown RBP eCLIP26.92■■□□□ 1.91e-7■■■■□ 24.4
SEMA3B-208ENST00000456210 WDR97A6NE52 1622 aa26.92■■□□□ 1.9
SEMA3B-208ENST00000456210 ABCA10Q8WWZ4 1543 aa26.9■■□□□ 1.9
SEMA3B-208ENST00000456210 SETD5Q9C0A6 1442 aa26.89■■□□□ 1.9
SEMA3B-208ENST00000456210 FKBP8Q14318 412 aa26.87■■□□□ 1.89
SEMA3B-208ENST00000456210 CARMIL1Q5VZK9 1371 aa26.83■■□□□ 1.89
SEMA3B-208ENST00000456210 EIF4G3O43432 1585 aaKnown RBP26.83■■□□□ 1.88
SEMA3B-208ENST00000456210 TIMELESSQ9UNS1 1208 aa26.82■■□□□ 1.88
SEMA3B-208ENST00000456210 PPP1R15AO75807 674 aaPredicted RBP26.81■■□□□ 1.88
SEMA3B-208ENST00000456210 BCANQ96GW7 911 aa26.81■■□□□ 1.88
SEMA3B-208ENST00000456210 CCER2I3L3R5 266 aa26.8■■□□□ 1.88
SEMA3B-208ENST00000456210 BCL11AQ9H165 835 aa26.79■■□□□ 1.88
SEMA3B-208ENST00000456210 CFAP43Q8NDM7 1665 aa26.78■■□□□ 1.88
SEMA3B-208ENST00000456210 GAPVD1Q14C86 1478 aa26.78■■□□□ 1.88
SEMA3B-208ENST00000456210 LRRC9Q6ZRR7 1453 aa26.78■■□□□ 1.88
SEMA3B-208ENST00000456210 ITGAEP38570 1179 aa26.78■■□□□ 1.88
SEMA3B-208ENST00000456210 ABCA5Q8WWZ7 1642 aa26.77■■□□□ 1.88
SEMA3B-208ENST00000456210 DDX10Q13206 875 aaKnown RBP26.77■■□□□ 1.88
SEMA3B-208ENST00000456210 NEFLP07196 543 aa26.75■■□□□ 1.87
SEMA3B-208ENST00000456210 RBM19Q9Y4C8 960 aaKnown RBP26.74■■□□□ 1.87
SEMA3B-208ENST00000456210 CUL7Q14999 1698 aa26.71■■□□□ 1.87
SEMA3B-208ENST00000456210 PBRM1Q86U86 1689 aa26.7■■□□□ 1.86
SEMA3B-208ENST00000456210 PHLDB1Q86UU1 1377 aa26.69■■□□□ 1.86
SEMA3B-208ENST00000456210 SIN3AQ96ST3 1273 aa26.65■■□□□ 1.86
SEMA3B-208ENST00000456210 GRIN2BQ13224 1484 aa26.63■■□□□ 1.85
SEMA3B-208ENST00000456210 FHAD1B1AJZ9 1412 aa26.61■■□□□ 1.85
SEMA3B-208ENST00000456210 ANP32CO43423 234 aa26.61■■□□□ 1.85
SEMA3B-208ENST00000456210 SNAPC4Q5SXM2 1469 aa26.6■■□□□ 1.85
SEMA3B-208ENST00000456210 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.6■■□□□ 1.85
SEMA3B-208ENST00000456210 PCF11O94913 1555 aaKnown RBP26.59■■□□□ 1.85
SEMA3B-208ENST00000456210 FBLN2P98095 1184 aa26.56■■□□□ 1.84
SEMA3B-208ENST00000456210 TRIM52Q96A61 297 aa26.53■■□□□ 1.84
SEMA3B-208ENST00000456210 FAM50AQ14320 339 aaKnown RBP26.5■■□□□ 1.83
SEMA3B-208ENST00000456210 CTTNBP2Q8WZ74 1663 aa26.49■■□□□ 1.83
SEMA3B-208ENST00000456210 ADAMTS12P58397 1594 aa26.47■■□□□ 1.83
SEMA3B-208ENST00000456210 FANCIQ9NVI1 1328 aa26.47■■□□□ 1.83
SEMA3B-208ENST00000456210 FYCO1Q9BQS8 1478 aa26.46■■□□□ 1.83
SEMA3B-208ENST00000456210 MAGI1Q96QZ7 1491 aaPredicted RBP26.46■■□□□ 1.83
SEMA3B-208ENST00000456210 CHMP7Q8WUX9 453 aaPredicted RBP26.45■■□□□ 1.82
SEMA3B-208ENST00000456210 MSH5O43196 834 aa26.43■■□□□ 1.82
SEMA3B-208ENST00000456210 CHD1O14646 1710 aa26.42■■□□□ 1.82
SEMA3B-208ENST00000456210 EFCAB5A4FU69 1503 aa26.42■■□□□ 1.82
SEMA3B-208ENST00000456210 HIRIP3Q9BW71 556 aaPredicted RBP26.4■■□□□ 1.82
SEMA3B-208ENST00000456210 SYNJ2O15056 1496 aa26.39■■□□□ 1.82
SEMA3B-208ENST00000456210 TONSLQ96HA7 1378 aa26.39■■□□□ 1.82
SEMA3B-208ENST00000456210 CCDC18Q5T9S5 1454 aa26.37■■□□□ 1.81
SEMA3B-208ENST00000456210 CASKIN1Q8WXD9 1431 aa26.36■■□□□ 1.81
SEMA3B-208ENST00000456210 UACAQ9BZF9 1416 aa26.36■■□□□ 1.81
SEMA3B-208ENST00000456210 PTPN23Q9H3S7 1636 aa26.34■■□□□ 1.81
SEMA3B-208ENST00000456210 GRIN2AQ12879 1464 aa26.33■■□□□ 1.81
SEMA3B-208ENST00000456210 KDM5BQ9UGL1 1544 aa26.33■■□□□ 1.81
SEMA3B-208ENST00000456210 HFM1A2PYH4 1435 aa26.33■■□□□ 1.81
SEMA3B-208ENST00000456210 FGD6Q6ZV73 1430 aa26.32■■□□□ 1.8
SEMA3B-208ENST00000456210 ERICH6BQ5W0A0 696 aa26.32■■□□□ 1.8
SEMA3B-208ENST00000456210 CDK11AQ9UQ88 783 aaPredicted RBP26.29■■□□□ 1.8
SEMA3B-208ENST00000456210 FHOD3Q2V2M9 1422 aa26.27■■□□□ 1.8
SEMA3B-208ENST00000456210 P3H3Q8IVL6 736 aa26.26■■□□□ 1.79
SEMA3B-208ENST00000456210 CEP170Q5SW79 1584 aa26.23■■□□□ 1.79
SEMA3B-208ENST00000456210 HNRNPUQ00839 825 aaKnown RBP eCLIP26.23■■□□□ 1.79
SEMA3B-208ENST00000456210 SAMD9Q5K651 1589 aa26.22■■□□□ 1.79
SEMA3B-208ENST00000456210 NCOA2Q15596 1464 aa26.2■■□□□ 1.78
SEMA3B-208ENST00000456210 PTPRKQ15262 1439 aa26.2■■□□□ 1.78
SEMA3B-208ENST00000456210 FMN1Q68DA7 1419 aa26.2■■□□□ 1.78
SEMA3B-208ENST00000456210 NAIPQ13075 1403 aa26.18■■□□□ 1.78
SEMA3B-208ENST00000456210 MYT1LQ9UL68 1186 aa26.17■■□□□ 1.78
SEMA3B-208ENST00000456210 OSCARQ8IYS5 282 aa26.16■■□□□ 1.78
SEMA3B-208ENST00000456210 ERICH6Q7L0X2 663 aa26.15■■□□□ 1.78
SEMA3B-208ENST00000456210 NUP160Q12769 1436 aa26.14■■□□□ 1.78
SEMA3B-208ENST00000456210 PPP4R2Q9NY27 417 aa26.14■■□□□ 1.77
SEMA3B-208ENST00000456210 LRRIQ1Q96JM4 1722 aa26.12■■□□□ 1.77
SEMA3B-208ENST00000456210 HECW1Q76N89 1606 aa26.12■■□□□ 1.77
SEMA3B-208ENST00000456210 ATP1B4Q9UN42 357 aaPredicted RBP26.11■■□□□ 1.77
SEMA3B-208ENST00000456210 WASHC2AQ641Q2 1341 aa26.1■■□□□ 1.77
SEMA3B-208ENST00000456210 IQGAP2Q13576 1575 aa26.1■■□□□ 1.77
SEMA3B-208ENST00000456210 GCC2Q8IWJ2 1684 aa26.09■■□□□ 1.77
SEMA3B-208ENST00000456210 CNTLNQ9NXG0 1405 aa26.09■■□□□ 1.77
SEMA3B-208ENST00000456210 IRX6P78412 446 aaPredicted RBP26.09■■□□□ 1.77
SEMA3B-208ENST00000456210 MYOM3Q5VTT5 1437 aa26.08■■□□□ 1.77
SEMA3B-208ENST00000456210 SUPT6HQ7KZ85 1726 aaKnown RBP26.08■■□□□ 1.77
SEMA3B-208ENST00000456210 MTUS2Q5JR59 1369 aa26.06■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms