RNA–Protein interactions for RNA: ENST00000455853.1

LINC00473-202, long intergenic non-protein coding RNA 473, humanhuman

TSL 1 (best)

Gene LINC00473, Length 1,822 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473-202ENST00000455853 OSCARQ8IYS5 282 aa18.97■□□□□ 0.63
LINC00473-202ENST00000455853 EIF4G3O43432 1585 aaKnown RBP18.96■□□□□ 0.63
LINC00473-202ENST00000455853 HNRNPUL2Q1KMD3 747 aaKnown RBP18.94■□□□□ 0.62
LINC00473-202ENST00000455853 TDRD9Q8NDG6 1382 aaKnown RBP18.94■□□□□ 0.62
LINC00473-202ENST00000455853 PRXQ9BXM0 1461 aa18.89■□□□□ 0.61
LINC00473-202ENST00000455853 MIER1Q8N108 512 aa18.87■□□□□ 0.61
LINC00473-202ENST00000455853 ARAP1Q96P48 1450 aa18.82■□□□□ 0.6
LINC00473-202ENST00000455853 FBLN2P98095 1184 aa18.82■□□□□ 0.6
LINC00473-202ENST00000455853 RRBP1Q9P2E9 1410 aaKnown RBP18.8■□□□□ 0.6
LINC00473-202ENST00000455853 DHX57Q6P158 1386 aaKnown RBP18.79■□□□□ 0.6
LINC00473-202ENST00000455853 SNAPC4Q5SXM2 1469 aa18.78■□□□□ 0.6
LINC00473-202ENST00000455853 YTHDC1Q96MU7 727 aaKnown RBP18.77■□□□□ 0.6
LINC00473-202ENST00000455853 ABCA10Q8WWZ4 1543 aa18.76■□□□□ 0.59
LINC00473-202ENST00000455853 WDR97A6NE52 1622 aa18.75■□□□□ 0.59
LINC00473-202ENST00000455853 GRIN2BQ13224 1484 aa18.75■□□□□ 0.59
LINC00473-202ENST00000455853 KIF27Q86VH2 1401 aa18.75■□□□□ 0.59
LINC00473-202ENST00000455853 GAPVD1Q14C86 1478 aa18.73■□□□□ 0.59
LINC00473-202ENST00000455853 CHD1O14646 1710 aa18.72■□□□□ 0.59
LINC00473-202ENST00000455853 CHMP7Q8WUX9 453 aaPredicted RBP18.7■□□□□ 0.58
LINC00473-202ENST00000455853 MAP3K1Q13233 1512 aa18.7■□□□□ 0.58
LINC00473-202ENST00000455853 MAGI1Q96QZ7 1491 aaPredicted RBP18.69■□□□□ 0.58
LINC00473-202ENST00000455853 ABCA5Q8WWZ7 1642 aa18.68■□□□□ 0.58
LINC00473-202ENST00000455853 SYNJ2O15056 1496 aa18.65■□□□□ 0.58
LINC00473-202ENST00000455853 ARHGEF11O15085 1522 aa18.64■□□□□ 0.57
LINC00473-202ENST00000455853 CCNB3Q8WWL7 1395 aa18.64■□□□□ 0.57
LINC00473-202ENST00000455853 RIMBP3CA6NJZ7 1639 aa18.64■□□□□ 0.57
LINC00473-202ENST00000455853 RIMBP3BA6NNM3 1639 aa18.64■□□□□ 0.57
LINC00473-202ENST00000455853 RIMBP3Q9UFD9 1639 aa18.64■□□□□ 0.57
LINC00473-202ENST00000455853 PBRM1Q86U86 1689 aa18.63■□□□□ 0.57
LINC00473-202ENST00000455853 ARHGAP35Q9NRY4 1499 aa18.61■□□□□ 0.57
LINC00473-202ENST00000455853 KANK4Q5T7N3 995 aaPredicted RBP18.57■□□□□ 0.56
LINC00473-202ENST00000455853 CLASP1Q7Z460 1538 aa18.56■□□□□ 0.56
LINC00473-202ENST00000455853 RANGAP1P46060 587 aaPredicted RBP18.56■□□□□ 0.56
LINC00473-202ENST00000455853 TIAM1Q13009 1591 aa18.55■□□□□ 0.56
LINC00473-202ENST00000455853 CYB5RLQ6IPT4 315 aa18.54■□□□□ 0.56
LINC00473-202ENST00000455853 ADAMTS12P58397 1594 aa18.52■□□□□ 0.55
LINC00473-202ENST00000455853 GRIN2AQ12879 1464 aa18.51■□□□□ 0.55
LINC00473-202ENST00000455853 FHAD1B1AJZ9 1412 aa18.51■□□□□ 0.55
LINC00473-202ENST00000455853 CFAP43Q8NDM7 1665 aa18.49■□□□□ 0.55
LINC00473-202ENST00000455853 MAPKBP1O60336 1514 aa18.45■□□□□ 0.54
LINC00473-202ENST00000455853 TIMELESSQ9UNS1 1208 aa18.45■□□□□ 0.54
LINC00473-202ENST00000455853 SUPT16HQ9Y5B9 1047 aaKnown RBP18.45■□□□□ 0.54
LINC00473-202ENST00000455853 SETD5Q9C0A6 1442 aa18.45■□□□□ 0.54
LINC00473-202ENST00000455853 RAB3GAP2Q9H2M9 1393 aa18.44■□□□□ 0.54
LINC00473-202ENST00000455853 NUP160Q12769 1436 aa18.44■□□□□ 0.54
LINC00473-202ENST00000455853 CEP170Q5SW79 1584 aa18.43■□□□□ 0.54
LINC00473-202ENST00000455853 LRRC9Q6ZRR7 1453 aa18.43■□□□□ 0.54
LINC00473-202ENST00000455853 IGF1RP08069 1367 aa18.42■□□□□ 0.54
LINC00473-202ENST00000455853 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.39■□□□□ 0.53
LINC00473-202ENST00000455853 CARMIL1Q5VZK9 1371 aa18.37■□□□□ 0.53
LINC00473-202ENST00000455853 EFCAB5A4FU69 1503 aa18.36■□□□□ 0.53
LINC00473-202ENST00000455853 ERCC6L2Q5T890 1561 aa18.35■□□□□ 0.53
LINC00473-202ENST00000455853 FYCO1Q9BQS8 1478 aa18.32■□□□□ 0.52
LINC00473-202ENST00000455853 PCF11O94913 1555 aaKnown RBP18.31■□□□□ 0.52
LINC00473-202ENST00000455853 JPH4Q96JJ6 628 aa18.29■□□□□ 0.52
LINC00473-202ENST00000455853 PHLDB1Q86UU1 1377 aa18.28■□□□□ 0.52
LINC00473-202ENST00000455853 CUL7Q14999 1698 aa18.28■□□□□ 0.52
LINC00473-202ENST00000455853 SHROOM2Q13796 1616 aa18.28■□□□□ 0.52
LINC00473-202ENST00000455853 PRG4Q92954 1404 aaPredicted RBP18.26■□□□□ 0.51
LINC00473-202ENST00000455853 ITGAEP38570 1179 aa18.26■□□□□ 0.51
LINC00473-202ENST00000455853 CTTNBP2Q8WZ74 1663 aa18.25■□□□□ 0.51
LINC00473-202ENST00000455853 CASKIN1Q8WXD9 1431 aa18.25■□□□□ 0.51
LINC00473-202ENST00000455853 CCER2I3L3R5 266 aa18.24■□□□□ 0.51
LINC00473-202ENST00000455853 TRHP20396 242 aaPredicted RBP18.22■□□□□ 0.51
LINC00473-202ENST00000455853 TSHZ2Q9NRE2 1034 aa18.21■□□□□ 0.51
LINC00473-202ENST00000455853 KIAA0586Q9BVV6 1533 aa18.21■□□□□ 0.51
LINC00473-202ENST00000455853 PPP1R15AO75807 674 aaPredicted RBP18.18■□□□□ 0.5
LINC00473-202ENST00000455853 FAM50AQ14320 339 aaKnown RBP18.17■□□□□ 0.5
LINC00473-202ENST00000455853 FMN1Q68DA7 1419 aa18.17■□□□□ 0.5
LINC00473-202ENST00000455853 NEFLP07196 543 aa18.13■□□□□ 0.49
LINC00473-202ENST00000455853 DDX10Q13206 875 aaKnown RBP18.12■□□□□ 0.49
LINC00473-202ENST00000455853 FGD6Q6ZV73 1430 aa18.12■□□□□ 0.49
LINC00473-202ENST00000455853 ANP32CO43423 234 aa18.12■□□□□ 0.49
LINC00473-202ENST00000455853 FHOD3Q2V2M9 1422 aa18.1■□□□□ 0.49
LINC00473-202ENST00000455853 UACAQ9BZF9 1416 aa18.1■□□□□ 0.49
LINC00473-202ENST00000455853 SIN3AQ96ST3 1273 aa18.1■□□□□ 0.49
LINC00473-202ENST00000455853 HFM1A2PYH4 1435 aa18.1■□□□□ 0.49
LINC00473-202ENST00000455853 ANP32EQ9BTT0 268 aa18.09■□□□□ 0.49
LINC00473-202ENST00000455853 CCDC18Q5T9S5 1454 aa18.09■□□□□ 0.49
LINC00473-202ENST00000455853 PTPN23Q9H3S7 1636 aa18.08■□□□□ 0.49
LINC00473-202ENST00000455853 TONSLQ96HA7 1378 aa18.07■□□□□ 0.48
LINC00473-202ENST00000455853 SAMD9Q5K651 1589 aa18.07■□□□□ 0.48
LINC00473-202ENST00000455853 AEBP2Q6ZN18 517 aaPredicted RBP18.06■□□□□ 0.48
LINC00473-202ENST00000455853 KCNH8Q96L42 1107 aa18.06■□□□□ 0.48
LINC00473-202ENST00000455853 SUPT6HQ7KZ85 1726 aaKnown RBP18.06■□□□□ 0.48
LINC00473-202ENST00000455853 IQGAP2Q13576 1575 aa18.05■□□□□ 0.48
LINC00473-202ENST00000455853 FKBP8Q14318 412 aa18.05■□□□□ 0.48
LINC00473-202ENST00000455853 EHBP1L1Q8N3D4 1523 aa18.03■□□□□ 0.48
LINC00473-202ENST00000455853 CARMIL2Q6F5E8 1435 aa18.02■□□□□ 0.47
LINC00473-202ENST00000455853 MTUS2Q5JR59 1369 aa18.01■□□□□ 0.47
LINC00473-202ENST00000455853 PTPRGP23470 1445 aa18.01■□□□□ 0.47
LINC00473-202ENST00000455853 MYOM3Q5VTT5 1437 aa18■□□□□ 0.47
LINC00473-202ENST00000455853 DISP1Q96F81 1524 aa17.99■□□□□ 0.47
LINC00473-202ENST00000455853 GCC2Q8IWJ2 1684 aa17.99■□□□□ 0.47
LINC00473-202ENST00000455853 ATP1B4Q9UN42 357 aaPredicted RBP17.98■□□□□ 0.47
LINC00473-202ENST00000455853 LRRIQ1Q96JM4 1722 aa17.97■□□□□ 0.47
LINC00473-202ENST00000455853 NPM1P06748 294 aaKnown RBP eCLIP17.97■□□□□ 0.47
LINC00473-202ENST00000455853 P3H3Q8IVL6 736 aa17.97■□□□□ 0.47
LINC00473-202ENST00000455853 HECW1Q76N89 1606 aa17.97■□□□□ 0.47
LINC00473-202ENST00000455853 ADCY10Q96PN6 1610 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms