RNA–Protein interactions for RNA: ENST00000453394.5

RAD50-205, Transcript of RAD50 double strand break repair protein, humanhuman

TSL 5

Gene RAD50, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-205ENST00000453394 CHD1O14646 1710 aa13.53□□□□□ -0.24
RAD50-205ENST00000453394 CHMP7Q8WUX9 453 aaPredicted RBP13.51□□□□□ -0.25
RAD50-205ENST00000453394 NUP160Q12769 1436 aa13.5□□□□□ -0.25
RAD50-205ENST00000453394 GOLGA3Q08378 1498 aa13.49□□□□□ -0.25
RAD50-205ENST00000453394 FAM9AQ8IZU1 332 aaPredicted RBP13.47□□□□□ -0.25
RAD50-205ENST00000453394 CEP170Q5SW79 1584 aa13.45□□□□□ -0.26
RAD50-205ENST00000453394 CLASP1Q7Z460 1538 aa13.44□□□□□ -0.26
RAD50-205ENST00000453394 KIAA0586Q9BVV6 1533 aa13.44□□□□□ -0.26
RAD50-205ENST00000453394 FBLN2P98095 1184 aa13.44□□□□□ -0.26
RAD50-205ENST00000453394 CTTNBP2Q8WZ74 1663 aa13.43□□□□□ -0.26
RAD50-205ENST00000453394 OSCARQ8IYS5 282 aa13.42□□□□□ -0.26
RAD50-205ENST00000453394 IQGAP2Q13576 1575 aa13.4□□□□□ -0.26
RAD50-205ENST00000453394 SHROOM2Q13796 1616 aa13.38□□□□□ -0.27
RAD50-205ENST00000453394 TNIKQ9UKE5 1360 aa13.36□□□□□ -0.27
RAD50-205ENST00000453394 UGGT2Q9NYU1 1516 aa13.35□□□□□ -0.27
RAD50-205ENST00000453394 UBTFP17480 764 aaKnown RBP13.32□□□□□ -0.28
RAD50-205ENST00000453394 EFCAB5A4FU69 1503 aa13.32□□□□□ -0.28
RAD50-205ENST00000453394 SAMD9Q5K651 1589 aa13.29□□□□□ -0.28
RAD50-205ENST00000453394 JPH4Q96JJ6 628 aa13.28□□□□□ -0.28
RAD50-205ENST00000453394 CARMIL2Q6F5E8 1435 aa13.28□□□□□ -0.28
RAD50-205ENST00000453394 KIAA0556O60303 1618 aa13.27□□□□□ -0.29
RAD50-205ENST00000453394 PRG4Q92954 1404 aaPredicted RBP13.26□□□□□ -0.29
RAD50-205ENST00000453394 DISP1Q96F81 1524 aa13.25□□□□□ -0.29
RAD50-205ENST00000453394 ARHGEF11O15085 1522 aa13.24□□□□□ -0.29
RAD50-205ENST00000453394 CLIP1P30622 1438 aa13.22□□□□□ -0.29
RAD50-205ENST00000453394 CEP162Q5TB80 1403 aa13.22□□□□□ -0.29
RAD50-205ENST00000453394 LOC105371045A0A1W2PR82 267 aa13.2□□□□□ -0.3
RAD50-205ENST00000453394 ARHGAP35Q9NRY4 1499 aa13.2□□□□□ -0.3
RAD50-205ENST00000453394 EHMT2Q96KQ7 1210 aa13.19□□□□□ -0.3
RAD50-205ENST00000453394 RIMBP3CA6NJZ7 1639 aa13.19□□□□□ -0.3
RAD50-205ENST00000453394 RIMBP3BA6NNM3 1639 aa13.19□□□□□ -0.3
RAD50-205ENST00000453394 RIMBP3Q9UFD9 1639 aa13.19□□□□□ -0.3
RAD50-205ENST00000453394 ERCC6L2Q5T890 1561 aa13.18□□□□□ -0.3
RAD50-205ENST00000453394 DNAJC5Q9H3Z4 198 aa13.17□□□□□ -0.3
RAD50-205ENST00000453394 FMN1Q68DA7 1419 aa13.16□□□□□ -0.3
RAD50-205ENST00000453394 PTPRGP23470 1445 aa13.15□□□□□ -0.31
RAD50-205ENST00000453394 FHOD3Q2V2M9 1422 aa13.14□□□□□ -0.31
RAD50-205ENST00000453394 ARAP1Q96P48 1450 aa13.14□□□□□ -0.31
RAD50-205ENST00000453394 UHRF1BP1LA0JNW5 1464 aa13.11□□□□□ -0.31
RAD50-205ENST00000453394 ABCA8O94911 1581 aa13.1□□□□□ -0.31
RAD50-205ENST00000453394 UACAQ9BZF9 1416 aa13.09□□□□□ -0.31
RAD50-205ENST00000453394 ABCC2Q92887 1545 aa13.09□□□□□ -0.31
RAD50-205ENST00000453394 FYCO1Q9BQS8 1478 aa13.08□□□□□ -0.32
RAD50-205ENST00000453394 RANGAP1P46060 587 aaPredicted RBP13.08□□□□□ -0.32
RAD50-205ENST00000453394 RAPGEF6Q8TEU7 1601 aa13.08□□□□□ -0.32
RAD50-205ENST00000453394 VPS8Q8N3P4 1428 aa13.08□□□□□ -0.32
RAD50-205ENST00000453394 HECW1Q76N89 1606 aa13.07□□□□□ -0.32
RAD50-205ENST00000453394 DMRT2Q9Y5R5 561 aa13.07□□□□□ -0.32
RAD50-205ENST00000453394 CASKIN1Q8WXD9 1431 aa13.07□□□□□ -0.32
RAD50-205ENST00000453394 P3H3Q8IVL6 736 aa13.06□□□□□ -0.32
RAD50-205ENST00000453394 PLB1Q6P1J6 1458 aa13.05□□□□□ -0.32
RAD50-205ENST00000453394 MAPK8IP2Q13387 824 aaPredicted RBP13.04□□□□□ -0.32
RAD50-205ENST00000453394 PCF11O94913 1555 aaKnown RBP13.04□□□□□ -0.32
RAD50-205ENST00000453394 ADCY10Q96PN6 1610 aa13.04□□□□□ -0.32
RAD50-205ENST00000453394 CCDC18Q5T9S5 1454 aa13.03□□□□□ -0.32
RAD50-205ENST00000453394 KDM5BQ9UGL1 1544 aa13.02□□□□□ -0.32
RAD50-205ENST00000453394 SCAF1Q9H7N4 1312 aaKnown RBP13.02□□□□□ -0.33
RAD50-205ENST00000453394 NUP153P49790 1475 aaKnown RBP13.02□□□□□ -0.33
RAD50-205ENST00000453394 MAP3K1Q13233 1512 aa13□□□□□ -0.33
RAD50-205ENST00000453394 CYB5RLQ6IPT4 315 aa13□□□□□ -0.33
RAD50-205ENST00000453394 EPRSP07814 1512 aaKnown RBP12.98□□□□□ -0.33
RAD50-205ENST00000453394 MAPKBP1O60336 1514 aa12.97□□□□□ -0.33
RAD50-205ENST00000453394 ZCCHC11Q5TAX3 1644 aaKnown RBP12.97□□□□□ -0.33
RAD50-205ENST00000453394 TTBK1Q5TCY1 1321 aaPredicted RBP12.96□□□□□ -0.33
RAD50-205ENST00000453394 CFAP43Q8NDM7 1665 aa12.96□□□□□ -0.34
RAD50-205ENST00000453394 ATP10BO94823 1461 aa12.95□□□□□ -0.34
RAD50-205ENST00000453394 NPM1P06748 294 aaKnown RBP eCLIP12.94□□□□□ -0.34
RAD50-205ENST00000453394 LRRIQ1Q96JM4 1722 aa12.93□□□□□ -0.34
RAD50-205ENST00000453394 TIAM1Q13009 1591 aa12.93□□□□□ -0.34
RAD50-205ENST00000453394 CDK11AQ9UQ88 783 aaPredicted RBP12.92□□□□□ -0.34
RAD50-205ENST00000453394 CDK13Q14004 1512 aaKnown RBP12.92□□□□□ -0.34
RAD50-205ENST00000453394 WDR7Q9Y4E6 1490 aa12.9□□□□□ -0.34
RAD50-205ENST00000453394 EHBP1L1Q8N3D4 1523 aa12.89□□□□□ -0.35
RAD50-205ENST00000453394 ASXL2Q76L83 1435 aa12.89□□□□□ -0.35
RAD50-205ENST00000453394 APLP2Q06481 763 aa12.89□□□□□ -0.35
RAD50-205ENST00000453394 TROQ12816 1431 aaPredicted RBP12.88□□□□□ -0.35
RAD50-205ENST00000453394 ATP1B4Q9UN42 357 aaPredicted RBP12.87□□□□□ -0.35
RAD50-205ENST00000453394 PLEKHD1A6NEE1 506 aa12.86□□□□□ -0.35
RAD50-205ENST00000453394 LRRC9Q6ZRR7 1453 aa12.86□□□□□ -0.35
RAD50-205ENST00000453394 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.85□□□□□ -0.35
RAD50-205ENST00000453394 KIF14Q15058 1648 aa12.85□□□□□ -0.35
RAD50-205ENST00000453394 HNRNPUL2Q1KMD3 747 aaKnown RBP12.85□□□□□ -0.35
RAD50-205ENST00000453394 GLI2P10070 1586 aa12.84□□□□□ -0.35
RAD50-205ENST00000453394 MTUS2Q5JR59 1369 aa12.84□□□□□ -0.35
RAD50-205ENST00000453394 ABCC10Q5T3U5 1492 aa12.84□□□□□ -0.35
RAD50-205ENST00000453394 MAGI3Q5TCQ9 1506 aa12.83□□□□□ -0.36
RAD50-205ENST00000453394 DIP2BQ9P265 1576 aa12.82□□□□□ -0.36
RAD50-205ENST00000453394 SUPT6HQ7KZ85 1726 aaKnown RBP12.82□□□□□ -0.36
RAD50-205ENST00000453394 ABCA9Q8IUA7 1624 aa12.81□□□□□ -0.36
RAD50-205ENST00000453394 ARID3CA6NKF2 412 aa12.81□□□□□ -0.36
RAD50-205ENST00000453394 ARAP3Q8WWN8 1544 aa12.79□□□□□ -0.36
RAD50-205ENST00000453394 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.78□□□□□ -0.366e-6■■■■■ 38.2
RAD50-205ENST00000453394 MAP3K4Q9Y6R4 1608 aa12.77□□□□□ -0.37
RAD50-205ENST00000453394 ITSN2Q9NZM3 1697 aa12.76□□□□□ -0.37
RAD50-205ENST00000453394 NCOA2Q15596 1464 aa12.76□□□□□ -0.37
RAD50-205ENST00000453394 TTC37Q6PGP7 1564 aa12.75□□□□□ -0.37
RAD50-205ENST00000453394 KIF13AQ9H1H9 1805 aa12.75□□□□□ -0.37
RAD50-205ENST00000453394 MYO5CQ9NQX4 1742 aa12.74□□□□□ -0.37
RAD50-205ENST00000453394 KANK4Q5T7N3 995 aaPredicted RBP12.74□□□□□ -0.37
RAD50-205ENST00000453394 PREX2Q70Z35 1606 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms