RNA–Protein interactions for RNA: ENST00000453040.5

CHL1-208, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 2

Gene CHL1, Length 3,960 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-208ENST00000453040 BCANQ96GW7 911 aa15.69■□□□□ 0.1
CHL1-208ENST00000453040 EIF5BO60841 1220 aaKnown RBP15.67■□□□□ 0.1
CHL1-208ENST00000453040 WDR97A6NE52 1622 aa15.67■□□□□ 0.1
CHL1-208ENST00000453040 KANK4Q5T7N3 995 aaPredicted RBP15.67■□□□□ 0.1
CHL1-208ENST00000453040 MAP3K1Q13233 1512 aa15.63■□□□□ 0.09
CHL1-208ENST00000453040 ITGAEP38570 1179 aa15.62■□□□□ 0.09
CHL1-208ENST00000453040 ATAD2BQ9ULI0 1458 aa15.62■□□□□ 0.09
CHL1-208ENST00000453040 PKNOX2Q96KN3 472 aa15.62■□□□□ 0.09
CHL1-208ENST00000453040 ARHGAP35Q9NRY4 1499 aa15.62■□□□□ 0.09
CHL1-208ENST00000453040 KDM5BQ9UGL1 1544 aa15.59■□□□□ 0.09
CHL1-208ENST00000453040 FKBP8Q14318 412 aa15.59■□□□□ 0.09
CHL1-208ENST00000453040 PAK3O75914 559 aaPredicted RBP15.58■□□□□ 0.09
CHL1-208ENST00000453040 PPP1R15AO75807 674 aaPredicted RBP15.58■□□□□ 0.08
CHL1-208ENST00000453040 CFAP43Q8NDM7 1665 aa15.57■□□□□ 0.08
CHL1-208ENST00000453040 CUX1P39880 1505 aa15.57■□□□□ 0.08
CHL1-208ENST00000453040 TIAM1Q13009 1591 aa15.56■□□□□ 0.08
CHL1-208ENST00000453040 CCNB3Q8WWL7 1395 aa15.52■□□□□ 0.08
CHL1-208ENST00000453040 DAXXQ9UER7 740 aaPredicted RBP15.51■□□□□ 0.07
CHL1-208ENST00000453040 RAB3GAP2Q9H2M9 1393 aa15.51■□□□□ 0.07
CHL1-208ENST00000453040 PRDM2Q13029 1718 aa15.5■□□□□ 0.07
CHL1-208ENST00000453040 CNGB1Q14028 1251 aaPredicted RBP15.48■□□□□ 0.07
CHL1-208ENST00000453040 MYT1LQ9UL68 1186 aa15.48■□□□□ 0.07
CHL1-208ENST00000453040 RTN4Q9NQC3 1192 aaKnown RBP15.47■□□□□ 0.07
CHL1-208ENST00000453040 WASHC2AQ641Q2 1341 aa15.46■□□□□ 0.07
CHL1-208ENST00000453040 LRRIQ1Q96JM4 1722 aa15.42■□□□□ 0.06
CHL1-208ENST00000453040 C11orf95C9JLR9 678 aaPredicted RBP15.42■□□□□ 0.06
CHL1-208ENST00000453040 LRRC9Q6ZRR7 1453 aa15.41■□□□□ 0.06
CHL1-208ENST00000453040 WASHC2CQ9Y4E1 1318 aa15.4■□□□□ 0.06
CHL1-208ENST00000453040 PHLDB1Q86UU1 1377 aa15.39■□□□□ 0.05
CHL1-208ENST00000453040 SETD5Q9C0A6 1442 aa15.38■□□□□ 0.05
CHL1-208ENST00000453040 CCER2I3L3R5 266 aa15.36■□□□□ 0.05
CHL1-208ENST00000453040 PCF11O94913 1555 aaKnown RBP15.36■□□□□ 0.05
CHL1-208ENST00000453040 HMGXB3Q12766 1538 aa15.36■□□□□ 0.05
CHL1-208ENST00000453040 PODXL2Q9NZ53 605 aa15.34■□□□□ 0.05
CHL1-208ENST00000453040 DENND4BO75064 1496 aaPredicted RBP15.34■□□□□ 0.05
CHL1-208ENST00000453040 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.32■□□□□ 0.04
CHL1-208ENST00000453040 POLR1AO95602 1720 aaPredicted RBP15.3■□□□□ 0.04
CHL1-208ENST00000453040 NBR1Q14596 966 aa15.3■□□□□ 0.04
CHL1-208ENST00000453040 CFTRP13569 1480 aa15.29■□□□□ 0.04
CHL1-208ENST00000453040 TIMELESSQ9UNS1 1208 aa15.28■□□□□ 0.04
CHL1-208ENST00000453040 ZMYND15Q9H091 742 aa15.28■□□□□ 0.04
CHL1-208ENST00000453040 NCOA2Q15596 1464 aa15.27■□□□□ 0.04
CHL1-208ENST00000453040 KIF27Q86VH2 1401 aa15.27■□□□□ 0.04
CHL1-208ENST00000453040 SIN3AQ96ST3 1273 aa15.26■□□□□ 0.03
CHL1-208ENST00000453040 NCAPD3P42695 1498 aa15.26■□□□□ 0.03
CHL1-208ENST00000453040 DDX10Q13206 875 aaKnown RBP15.25■□□□□ 0.03
CHL1-208ENST00000453040 PTPN23Q9H3S7 1636 aa15.25■□□□□ 0.03
CHL1-208ENST00000453040 IGF1RP08069 1367 aa15.25■□□□□ 0.03
CHL1-208ENST00000453040 PTPRKQ15262 1439 aa15.25■□□□□ 0.03
CHL1-208ENST00000453040 NOP58Q9Y2X3 529 aaKnown RBP15.24■□□□□ 0.03
CHL1-208ENST00000453040 ABCA5Q8WWZ7 1642 aa15.23■□□□□ 0.03
CHL1-208ENST00000453040 BRPF3Q9ULD4 1205 aa15.22■□□□□ 0.03
CHL1-208ENST00000453040 AQRO60306 1485 aaKnown RBP eCLIP15.21■□□□□ 0.03
CHL1-208ENST00000453040 SNAPC4Q5SXM2 1469 aa15.19■□□□□ 0.02
CHL1-208ENST00000453040 ARHGEF11O15085 1522 aa15.18■□□□□ 0.02
CHL1-208ENST00000453040 FHAD1B1AJZ9 1412 aa15.18■□□□□ 0.02
CHL1-208ENST00000453040 GCC2Q8IWJ2 1684 aa15.18■□□□□ 0.02
CHL1-208ENST00000453040 CTTNBP2Q8WZ74 1663 aa15.17■□□□□ 0.02
CHL1-208ENST00000453040 FYCO1Q9BQS8 1478 aa15.17■□□□□ 0.02
CHL1-208ENST00000453040 HECW1Q76N89 1606 aa15.17■□□□□ 0.02
CHL1-208ENST00000453040 PABPN1Q86U42 306 aaKnown RBP eCLIP15.16■□□□□ 0.02
CHL1-208ENST00000453040 FGD5Q6ZNL6 1462 aa15.16■□□□□ 0.02
CHL1-208ENST00000453040 HFM1A2PYH4 1435 aa15.16■□□□□ 0.02
CHL1-208ENST00000453040 TRIM52Q96A61 297 aa15.16■□□□□ 0.02
CHL1-208ENST00000453040 KDM6BO15054 1643 aa15.14■□□□□ 0.01
CHL1-208ENST00000453040 SAMD9Q5K651 1589 aa15.13■□□□□ 0.01
CHL1-208ENST00000453040 UACAQ9BZF9 1416 aa15.12■□□□□ 0.01
CHL1-208ENST00000453040 POLR3GLQ9BT43 218 aa15.12■□□□□ 0.01
CHL1-208ENST00000453040 EFCAB5A4FU69 1503 aa15.11■□□□□ 0.01
CHL1-208ENST00000453040 CASKIN1Q8WXD9 1431 aa15.1■□□□□ 0.01
CHL1-208ENST00000453040 NAIPQ13075 1403 aa15.1■□□□□ 0.01
CHL1-208ENST00000453040 CCDC18Q5T9S5 1454 aa15.1■□□□□ 0.01
CHL1-208ENST00000453040 HIRIP3Q9BW71 556 aaPredicted RBP15.09■□□□□ 0.01
CHL1-208ENST00000453040 IRX6P78412 446 aaPredicted RBP15.09■□□□□ 0.01
CHL1-208ENST00000453040 FGD6Q6ZV73 1430 aa15.08■□□□□ 0
CHL1-208ENST00000453040 CCDC184Q52MB2 194 aa15.06■□□□□ 0
CHL1-208ENST00000453040 MAGI3Q5TCQ9 1506 aa15.05■□□□□ 0
CHL1-208ENST00000453040 DCAF11Q8TEB1 546 aa15.05■□□□□ -0
CHL1-208ENST00000453040 SPATA31E1Q6ZUB1 1445 aa15.04■□□□□ -0
CHL1-208ENST00000453040 AAMPQ13685 434 aa15.04■□□□□ -0
CHL1-208ENST00000453040 RNF123Q5XPI4 1314 aa15.04■□□□□ -0
CHL1-208ENST00000453040 CC2D2AQ9P2K1 1620 aa15.04■□□□□ -0
CHL1-208ENST00000453040 NCOA1Q15788 1441 aa15.03■□□□□ -0
CHL1-208ENST00000453040 CDK11AQ9UQ88 783 aaPredicted RBP15.03■□□□□ -0
CHL1-208ENST00000453040 IPO9Q96P70 1041 aaKnown RBP15.02■□□□□ -0
CHL1-208ENST00000453040 TCOF1Q13428 1488 aaKnown RBP15.02□□□□□ -0.01
CHL1-208ENST00000453040 GRIN2BQ13224 1484 aa15.01□□□□□ -0.01
CHL1-208ENST00000453040 CARMIL1Q5VZK9 1371 aa15.01□□□□□ -0.01
CHL1-208ENST00000453040 THOC2Q8NI27 1593 aaKnown RBP15.01□□□□□ -0.01
CHL1-208ENST00000453040 UGGT2Q9NYU1 1516 aa15.01□□□□□ -0.01
CHL1-208ENST00000453040 CUL7Q14999 1698 aa15.01□□□□□ -0.01
CHL1-208ENST00000453040 FGD1P98174 961 aa15□□□□□ -0.01
CHL1-208ENST00000453040 ANP32CO43423 234 aa15□□□□□ -0.01
CHL1-208ENST00000453040 NEFLP07196 543 aa15□□□□□ -0.01
CHL1-208ENST00000453040 CNTLNQ9NXG0 1405 aa15□□□□□ -0.01
CHL1-208ENST00000453040 PRDM4Q9UKN5 801 aa15□□□□□ -0.01
CHL1-208ENST00000453040 KIF21AQ7Z4S6 1674 aa14.98□□□□□ -0.01
CHL1-208ENST00000453040 BCORL1Q5H9F3 1711 aa14.98□□□□□ -0.01
CHL1-208ENST00000453040 AEBP2Q6ZN18 517 aaPredicted RBP14.98□□□□□ -0.01
CHL1-208ENST00000453040 FHOD3Q2V2M9 1422 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms